PDB Short entry for 4D9E HEADER LYASE 11-JAN-12 4D9E TITLE D-CYSTEINE DESULFHYDRASE FROM SALMONELLA TYPHIMURIUM COMPLEXED WITH L- TITLE 2 CYCLOSERINE (LCS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-CYSTEINE DESULFHYDRASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 4.4.1.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 90371; SOURCE 4 GENE: DCYD, STM1953; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRSET C KEYWDS FOLD TYPE II PLP-DEPENDENT ENZYME, TRYPTOPHAN SYNTHASE BETA SUBUNIT KEYWDS 2 LIKE FAMILY, PLP DEPENDENT ENZYME, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.R.BHARATH,B.SHVETA,K.H.RAJESH,H.S.SAVITHRI,M.R.N.MURTHY REVDAT 2 08-NOV-23 4D9E 1 REMARK SEQADV REVDAT 1 30-MAY-12 4D9E 0 JRNL AUTH S.R.BHARATH,S.BISHT,R.K.HARIJAN,H.S.SAVITHRI,M.R.N.MURTHY JRNL TITL STRUCTURAL AND MUTATIONAL STUDIES ON SUBSTRATE SPECIFICITY JRNL TITL 2 AND CATALYSIS OF SALMONELLA TYPHIMURIUM D-CYSTEINE JRNL TITL 3 DESULFHYDRASE. JRNL REF PLOS ONE V. 7 36267 2012 JRNL REFN ESSN 1932-6203 JRNL PMID 22574144 JRNL DOI 10.1371/JOURNAL.PONE.0036267 REMARK 2 REMARK 2 RESOLUTION. 2.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 3 NUMBER OF REFLECTIONS : 39608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2122 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.47 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2365 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9664 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 115 REMARK 3 SOLVENT ATOMS : 248 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.343 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.247 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.070 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.861 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9926 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13540 ; 1.940 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1308 ; 6.415 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 378 ;38.611 ;24.656 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1498 ;15.952 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;25.751 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1590 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7504 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6497 ; 0.564 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 10355 ; 1.062 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3429 ; 1.640 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3180 ; 2.766 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 328 1 REMARK 3 1 B 4 B 328 1 REMARK 3 1 C 6 C 328 1 REMARK 3 1 D 1 D 328 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 2282 ; 0.13 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 2282 ; 0.11 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 2282 ; 0.10 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 2282 ; 0.10 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 2282 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 2282 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 2282 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 2282 ; 0.15 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 328 1 REMARK 3 1 B 4 B 328 1 REMARK 3 1 C 6 C 328 1 REMARK 3 1 D 1 D 328 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 22 ; 0.28 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 22 ; 0.46 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 C (A): 22 ; 0.40 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 D (A): 22 ; 0.26 ; 0.05 REMARK 3 TIGHT THERMAL 2 A (A**2): 22 ; 0.23 ; 0.50 REMARK 3 TIGHT THERMAL 2 B (A**2): 22 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 2 C (A**2): 22 ; 0.17 ; 0.50 REMARK 3 TIGHT THERMAL 2 D (A**2): 22 ; 0.19 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4D9E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070047. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41742 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.440 REMARK 200 RESOLUTION RANGE LOW (A) : 59.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.23200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4D8T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M AMMONIUM SULPHATE, 15% (V/V) REMARK 280 ETHYLENE GLYCOL, 0.1M HEPES, 0.2% BENZAMIDINE, PH 8.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 82.92000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET B -13 REMARK 465 ARG B -12 REMARK 465 GLY B -11 REMARK 465 SER B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 GLY B -3 REMARK 465 MET B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 LEU B 3 REMARK 465 MET C -13 REMARK 465 ARG C -12 REMARK 465 GLY C -11 REMARK 465 SER C -10 REMARK 465 HIS C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 GLY C -3 REMARK 465 MET C -2 REMARK 465 ALA C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 LEU C 3 REMARK 465 HIS C 4 REMARK 465 HIS C 5 REMARK 465 MET D -13 REMARK 465 ARG D -12 REMARK 465 GLY D -11 REMARK 465 SER D -10 REMARK 465 HIS D -9 REMARK 465 HIS D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 GLY D -3 REMARK 465 MET D -2 REMARK 465 ALA D -1 REMARK 465 SER D 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ARG A 8 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 GLU A 108 CD OE1 OE2 REMARK 470 ARG A 145 NE CZ NH1 NH2 REMARK 470 GLU A 181 CG CD OE1 OE2 REMARK 470 GLU A 182 CG CD OE1 OE2 REMARK 470 ARG B 8 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 64 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 145 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 182 CG CD OE1 OE2 REMARK 470 VAL B 183 CG1 CG2 REMARK 470 VAL B 184 CG1 CG2 REMARK 470 LEU C 6 CG CD1 CD2 REMARK 470 ARG C 8 CG CD NE CZ NH1 NH2 REMARK 470 ASP C 130 CG OD1 OD2 REMARK 470 MET D 1 CG SD CE REMARK 470 HIS D 4 CG ND1 CD2 CE1 NE2 REMARK 470 ARG D 8 NE CZ NH1 NH2 REMARK 470 ARG D 64 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 145 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 182 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 181 CB REMARK 480 GLU A 182 CB REMARK 480 LYS A 230 CD CE REMARK 480 ILE B 238 CG1 CG2 CD1 REMARK 480 ASP B 307 CG OD1 OD2 REMARK 480 ARG C 64 CD NE CZ NH1 NH2 REMARK 480 LEU C 132 CB CG CD1 CD2 REMARK 480 LEU C 142 CB CG CD1 CD2 REMARK 480 LYS C 230 CD CE NZ REMARK 480 LYS C 302 CG CD CE NZ REMARK 480 GLU D 13 CB CG CD OE1 OE2 REMARK 480 GLU D 226 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 180 CB CYS B 180 SG -0.103 REMARK 500 CYS C 129 CB CYS C 129 SG -0.138 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 183 CB - CA - C ANGL. DEV. = 12.1 DEGREES REMARK 500 VAL A 184 N - CA - CB ANGL. DEV. = -15.3 DEGREES REMARK 500 VAL A 184 N - CA - C ANGL. DEV. = -21.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 33 134.25 -172.90 REMARK 500 ALA A 46 64.35 28.65 REMARK 500 GLU A 181 110.75 -36.35 REMARK 500 GLU A 182 102.84 57.33 REMARK 500 VAL A 183 -76.24 159.55 REMARK 500 ALA A 196 -8.94 101.11 REMARK 500 SER A 221 -11.71 -140.51 REMARK 500 LEU A 283 -162.29 -106.53 REMARK 500 TYR A 287 -75.52 -112.20 REMARK 500 ALA B 46 58.88 35.78 REMARK 500 VAL B 183 -153.30 130.48 REMARK 500 VAL B 184 -178.14 50.95 REMARK 500 ALA B 196 -17.21 97.71 REMARK 500 SER B 221 -13.24 -141.31 REMARK 500 TYR B 287 -75.38 -115.87 REMARK 500 ARG C 8 21.23 13.66 REMARK 500 ALA C 46 59.47 31.50 REMARK 500 ALA C 131 124.53 174.77 REMARK 500 GLU C 181 -11.39 -31.81 REMARK 500 GLU C 182 15.69 -154.35 REMARK 500 ALA C 196 -16.43 101.17 REMARK 500 TYR C 287 -74.12 -111.78 REMARK 500 THR D 7 -15.96 -48.19 REMARK 500 ALA D 46 64.98 29.04 REMARK 500 GLU D 182 57.31 148.67 REMARK 500 VAL D 183 104.81 168.60 REMARK 500 VAL D 184 10.28 49.01 REMARK 500 ALA D 196 -16.05 100.13 REMARK 500 MET D 210 58.76 -143.87 REMARK 500 TYR D 287 -72.60 -113.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR C 7 ARG C 8 141.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LCS A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LCS B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LCS C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LCS D 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D8T RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE AT 2.2A REMARK 900 RELATED ID: 4D8U RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE AT 3.3 A WITH 8 REMARK 900 PROTOMERS IN THE ASYMMETRIC UNIT REMARK 900 RELATED ID: 4D8W RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE SOAKED WITH D-CYS REMARK 900 REVEALED PYRUVATE BOUND AT 4 A AWAY FROM THE ACTIVE SITE REMARK 900 RELATED ID: 4D92 RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE SOAKED WITH BETA- REMARK 900 CHLORO-D-ALANINE REVEALED PYRUVATE BOUND AT 4 A AWAY FROM THE REMARK 900 ACTIVE SITE REMARK 900 RELATED ID: 4D96 RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE COMPLEXED WITH REMARK 900 AMINO CARBOXY CYCLOPROPANE (ACC) REMARK 900 RELATED ID: 4D97 RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE COMPLEXED WITH D- REMARK 900 SERINE; D-SERINE IS BOUND NON-COVALENTLY AT THE ACTIVE SITE REMARK 900 RELATED ID: 4D99 RELATED DB: PDB REMARK 900 RELATED ID: 4D9B RELATED DB: PDB REMARK 900 RELATED ID: 4D9C RELATED DB: PDB REMARK 900 RELATED ID: 4D9F RELATED DB: PDB DBREF 4D9E A 1 328 UNP Q8ZNT7 DCYD_SALTY 1 328 DBREF 4D9E B 1 328 UNP Q8ZNT7 DCYD_SALTY 1 328 DBREF 4D9E C 1 328 UNP Q8ZNT7 DCYD_SALTY 1 328 DBREF 4D9E D 1 328 UNP Q8ZNT7 DCYD_SALTY 1 328 SEQADV 4D9E MET A -13 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E ARG A -12 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E GLY A -11 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E SER A -10 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS A -9 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS A -8 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS A -7 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS A -6 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS A -5 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS A -4 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E GLY A -3 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E MET A -2 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E ALA A -1 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E SER A 0 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E MET B -13 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E ARG B -12 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E GLY B -11 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E SER B -10 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS B -9 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS B -8 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS B -7 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS B -6 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS B -5 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS B -4 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E GLY B -3 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E MET B -2 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E ALA B -1 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E SER B 0 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E MET C -13 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E ARG C -12 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E GLY C -11 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E SER C -10 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS C -9 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS C -8 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS C -7 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS C -6 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS C -5 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS C -4 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E GLY C -3 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E MET C -2 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E ALA C -1 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E SER C 0 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E MET D -13 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E ARG D -12 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E GLY D -11 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E SER D -10 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS D -9 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS D -8 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS D -7 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS D -6 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS D -5 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E HIS D -4 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E GLY D -3 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E MET D -2 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E ALA D -1 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9E SER D 0 UNP Q8ZNT7 EXPRESSION TAG SEQRES 1 A 342 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 342 SER MET PRO LEU HIS HIS LEU THR ARG PHE PRO ARG LEU SEQRES 3 A 342 GLU PHE ILE GLY ALA PRO THR PRO LEU GLU TYR LEU PRO SEQRES 4 A 342 ARG LEU SER ASP TYR LEU GLY ARG GLU ILE TYR ILE LYS SEQRES 5 A 342 ARG ASP ASP VAL THR PRO ILE ALA MET GLY GLY ASN LYS SEQRES 6 A 342 LEU ARG LYS LEU GLU PHE LEU VAL ALA ASP ALA LEU ARG SEQRES 7 A 342 GLU GLY ALA ASP THR LEU ILE THR ALA GLY ALA ILE GLN SEQRES 8 A 342 SER ASN HIS VAL ARG GLN THR ALA ALA VAL ALA ALA LYS SEQRES 9 A 342 LEU GLY LEU HIS CYS VAL ALA LEU LEU GLU ASN PRO ILE SEQRES 10 A 342 GLY THR THR ALA GLU ASN TYR LEU THR ASN GLY ASN ARG SEQRES 11 A 342 LEU LEU LEU ASP LEU PHE ASN THR GLN ILE GLU MET CYS SEQRES 12 A 342 ASP ALA LEU THR ASP PRO ASP ALA GLN LEU GLN THR LEU SEQRES 13 A 342 ALA THR ARG ILE GLU ALA GLN GLY PHE ARG PRO TYR VAL SEQRES 14 A 342 ILE PRO VAL GLY GLY SER SER ALA LEU GLY ALA MET GLY SEQRES 15 A 342 TYR VAL GLU SER ALA LEU GLU ILE ALA GLN GLN CYS GLU SEQRES 16 A 342 GLU VAL VAL GLY LEU SER SER VAL VAL VAL ALA SER GLY SEQRES 17 A 342 SER ALA GLY THR HIS ALA GLY LEU ALA VAL GLY LEU GLU SEQRES 18 A 342 HIS LEU MET PRO ASP VAL GLU LEU ILE GLY VAL THR VAL SEQRES 19 A 342 SER ARG SER VAL ALA GLU GLN LYS PRO LYS VAL ILE ALA SEQRES 20 A 342 LEU GLN GLN ALA ILE ALA GLY GLN LEU ALA LEU THR ALA SEQRES 21 A 342 THR ALA ASP ILE HIS LEU TRP ASP ASP TYR PHE ALA PRO SEQRES 22 A 342 GLY TYR GLY VAL PRO ASN ASP ALA GLY MET GLU ALA VAL SEQRES 23 A 342 LYS LEU LEU ALA SER LEU GLU GLY VAL LEU LEU ASP PRO SEQRES 24 A 342 VAL TYR THR GLY LYS ALA MET ALA GLY LEU ILE ASP GLY SEQRES 25 A 342 ILE SER GLN LYS ARG PHE ASN ASP ASP GLY PRO ILE LEU SEQRES 26 A 342 PHE ILE HIS THR GLY GLY ALA PRO ALA LEU PHE ALA TYR SEQRES 27 A 342 HIS PRO HIS VAL SEQRES 1 B 342 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 342 SER MET PRO LEU HIS HIS LEU THR ARG PHE PRO ARG LEU SEQRES 3 B 342 GLU PHE ILE GLY ALA PRO THR PRO LEU GLU TYR LEU PRO SEQRES 4 B 342 ARG LEU SER ASP TYR LEU GLY ARG GLU ILE TYR ILE LYS SEQRES 5 B 342 ARG ASP ASP VAL THR PRO ILE ALA MET GLY GLY ASN LYS SEQRES 6 B 342 LEU ARG LYS LEU GLU PHE LEU VAL ALA ASP ALA LEU ARG SEQRES 7 B 342 GLU GLY ALA ASP THR LEU ILE THR ALA GLY ALA ILE GLN SEQRES 8 B 342 SER ASN HIS VAL ARG GLN THR ALA ALA VAL ALA ALA LYS SEQRES 9 B 342 LEU GLY LEU HIS CYS VAL ALA LEU LEU GLU ASN PRO ILE SEQRES 10 B 342 GLY THR THR ALA GLU ASN TYR LEU THR ASN GLY ASN ARG SEQRES 11 B 342 LEU LEU LEU ASP LEU PHE ASN THR GLN ILE GLU MET CYS SEQRES 12 B 342 ASP ALA LEU THR ASP PRO ASP ALA GLN LEU GLN THR LEU SEQRES 13 B 342 ALA THR ARG ILE GLU ALA GLN GLY PHE ARG PRO TYR VAL SEQRES 14 B 342 ILE PRO VAL GLY GLY SER SER ALA LEU GLY ALA MET GLY SEQRES 15 B 342 TYR VAL GLU SER ALA LEU GLU ILE ALA GLN GLN CYS GLU SEQRES 16 B 342 GLU VAL VAL GLY LEU SER SER VAL VAL VAL ALA SER GLY SEQRES 17 B 342 SER ALA GLY THR HIS ALA GLY LEU ALA VAL GLY LEU GLU SEQRES 18 B 342 HIS LEU MET PRO ASP VAL GLU LEU ILE GLY VAL THR VAL SEQRES 19 B 342 SER ARG SER VAL ALA GLU GLN LYS PRO LYS VAL ILE ALA SEQRES 20 B 342 LEU GLN GLN ALA ILE ALA GLY GLN LEU ALA LEU THR ALA SEQRES 21 B 342 THR ALA ASP ILE HIS LEU TRP ASP ASP TYR PHE ALA PRO SEQRES 22 B 342 GLY TYR GLY VAL PRO ASN ASP ALA GLY MET GLU ALA VAL SEQRES 23 B 342 LYS LEU LEU ALA SER LEU GLU GLY VAL LEU LEU ASP PRO SEQRES 24 B 342 VAL TYR THR GLY LYS ALA MET ALA GLY LEU ILE ASP GLY SEQRES 25 B 342 ILE SER GLN LYS ARG PHE ASN ASP ASP GLY PRO ILE LEU SEQRES 26 B 342 PHE ILE HIS THR GLY GLY ALA PRO ALA LEU PHE ALA TYR SEQRES 27 B 342 HIS PRO HIS VAL SEQRES 1 C 342 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 C 342 SER MET PRO LEU HIS HIS LEU THR ARG PHE PRO ARG LEU SEQRES 3 C 342 GLU PHE ILE GLY ALA PRO THR PRO LEU GLU TYR LEU PRO SEQRES 4 C 342 ARG LEU SER ASP TYR LEU GLY ARG GLU ILE TYR ILE LYS SEQRES 5 C 342 ARG ASP ASP VAL THR PRO ILE ALA MET GLY GLY ASN LYS SEQRES 6 C 342 LEU ARG LYS LEU GLU PHE LEU VAL ALA ASP ALA LEU ARG SEQRES 7 C 342 GLU GLY ALA ASP THR LEU ILE THR ALA GLY ALA ILE GLN SEQRES 8 C 342 SER ASN HIS VAL ARG GLN THR ALA ALA VAL ALA ALA LYS SEQRES 9 C 342 LEU GLY LEU HIS CYS VAL ALA LEU LEU GLU ASN PRO ILE SEQRES 10 C 342 GLY THR THR ALA GLU ASN TYR LEU THR ASN GLY ASN ARG SEQRES 11 C 342 LEU LEU LEU ASP LEU PHE ASN THR GLN ILE GLU MET CYS SEQRES 12 C 342 ASP ALA LEU THR ASP PRO ASP ALA GLN LEU GLN THR LEU SEQRES 13 C 342 ALA THR ARG ILE GLU ALA GLN GLY PHE ARG PRO TYR VAL SEQRES 14 C 342 ILE PRO VAL GLY GLY SER SER ALA LEU GLY ALA MET GLY SEQRES 15 C 342 TYR VAL GLU SER ALA LEU GLU ILE ALA GLN GLN CYS GLU SEQRES 16 C 342 GLU VAL VAL GLY LEU SER SER VAL VAL VAL ALA SER GLY SEQRES 17 C 342 SER ALA GLY THR HIS ALA GLY LEU ALA VAL GLY LEU GLU SEQRES 18 C 342 HIS LEU MET PRO ASP VAL GLU LEU ILE GLY VAL THR VAL SEQRES 19 C 342 SER ARG SER VAL ALA GLU GLN LYS PRO LYS VAL ILE ALA SEQRES 20 C 342 LEU GLN GLN ALA ILE ALA GLY GLN LEU ALA LEU THR ALA SEQRES 21 C 342 THR ALA ASP ILE HIS LEU TRP ASP ASP TYR PHE ALA PRO SEQRES 22 C 342 GLY TYR GLY VAL PRO ASN ASP ALA GLY MET GLU ALA VAL SEQRES 23 C 342 LYS LEU LEU ALA SER LEU GLU GLY VAL LEU LEU ASP PRO SEQRES 24 C 342 VAL TYR THR GLY LYS ALA MET ALA GLY LEU ILE ASP GLY SEQRES 25 C 342 ILE SER GLN LYS ARG PHE ASN ASP ASP GLY PRO ILE LEU SEQRES 26 C 342 PHE ILE HIS THR GLY GLY ALA PRO ALA LEU PHE ALA TYR SEQRES 27 C 342 HIS PRO HIS VAL SEQRES 1 D 342 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 D 342 SER MET PRO LEU HIS HIS LEU THR ARG PHE PRO ARG LEU SEQRES 3 D 342 GLU PHE ILE GLY ALA PRO THR PRO LEU GLU TYR LEU PRO SEQRES 4 D 342 ARG LEU SER ASP TYR LEU GLY ARG GLU ILE TYR ILE LYS SEQRES 5 D 342 ARG ASP ASP VAL THR PRO ILE ALA MET GLY GLY ASN LYS SEQRES 6 D 342 LEU ARG LYS LEU GLU PHE LEU VAL ALA ASP ALA LEU ARG SEQRES 7 D 342 GLU GLY ALA ASP THR LEU ILE THR ALA GLY ALA ILE GLN SEQRES 8 D 342 SER ASN HIS VAL ARG GLN THR ALA ALA VAL ALA ALA LYS SEQRES 9 D 342 LEU GLY LEU HIS CYS VAL ALA LEU LEU GLU ASN PRO ILE SEQRES 10 D 342 GLY THR THR ALA GLU ASN TYR LEU THR ASN GLY ASN ARG SEQRES 11 D 342 LEU LEU LEU ASP LEU PHE ASN THR GLN ILE GLU MET CYS SEQRES 12 D 342 ASP ALA LEU THR ASP PRO ASP ALA GLN LEU GLN THR LEU SEQRES 13 D 342 ALA THR ARG ILE GLU ALA GLN GLY PHE ARG PRO TYR VAL SEQRES 14 D 342 ILE PRO VAL GLY GLY SER SER ALA LEU GLY ALA MET GLY SEQRES 15 D 342 TYR VAL GLU SER ALA LEU GLU ILE ALA GLN GLN CYS GLU SEQRES 16 D 342 GLU VAL VAL GLY LEU SER SER VAL VAL VAL ALA SER GLY SEQRES 17 D 342 SER ALA GLY THR HIS ALA GLY LEU ALA VAL GLY LEU GLU SEQRES 18 D 342 HIS LEU MET PRO ASP VAL GLU LEU ILE GLY VAL THR VAL SEQRES 19 D 342 SER ARG SER VAL ALA GLU GLN LYS PRO LYS VAL ILE ALA SEQRES 20 D 342 LEU GLN GLN ALA ILE ALA GLY GLN LEU ALA LEU THR ALA SEQRES 21 D 342 THR ALA ASP ILE HIS LEU TRP ASP ASP TYR PHE ALA PRO SEQRES 22 D 342 GLY TYR GLY VAL PRO ASN ASP ALA GLY MET GLU ALA VAL SEQRES 23 D 342 LYS LEU LEU ALA SER LEU GLU GLY VAL LEU LEU ASP PRO SEQRES 24 D 342 VAL TYR THR GLY LYS ALA MET ALA GLY LEU ILE ASP GLY SEQRES 25 D 342 ILE SER GLN LYS ARG PHE ASN ASP ASP GLY PRO ILE LEU SEQRES 26 D 342 PHE ILE HIS THR GLY GLY ALA PRO ALA LEU PHE ALA TYR SEQRES 27 D 342 HIS PRO HIS VAL HET BEN A 401 9 HET LCS A 402 22 HET BEN B 401 9 HET LCS B 402 22 HET LCS C 401 22 HET BEN D 401 9 HET LCS D 402 22 HETNAM BEN BENZAMIDINE HETNAM LCS [5-HYDROXY-6-METHYL-4-({[(4E)-3-OXO-1,2-OXAZOLIDIN-4- HETNAM 2 LCS YLIDENE]AMINO}METHYL)PYRIDIN-3-YL]METHYL DIHYDROGEN HETNAM 3 LCS PHOSPHATE FORMUL 5 BEN 3(C7 H8 N2) FORMUL 6 LCS 4(C11 H14 N3 O7 P) FORMUL 12 HOH *248(H2 O) HELIX 1 1 LEU A 3 THR A 7 5 5 HELIX 2 2 LEU A 24 GLY A 32 1 9 HELIX 3 3 ASP A 41 THR A 43 5 3 HELIX 4 4 ASN A 50 GLU A 65 1 16 HELIX 5 5 SER A 78 GLY A 92 1 15 HELIX 6 6 ALA A 107 ASN A 113 1 7 HELIX 7 7 GLY A 114 PHE A 122 1 9 HELIX 8 8 ASP A 134 GLN A 149 1 16 HELIX 9 9 PRO A 157 SER A 161 5 5 HELIX 10 10 SER A 162 GLU A 181 1 20 HELIX 11 11 ALA A 196 MET A 210 1 15 HELIX 12 12 SER A 223 LEU A 242 1 20 HELIX 13 13 ASN A 265 GLY A 280 1 16 HELIX 14 14 TYR A 287 GLN A 301 1 15 HELIX 15 15 GLY A 317 PRO A 319 5 3 HELIX 16 16 ALA A 320 HIS A 325 1 6 HELIX 17 17 HIS B 4 PHE B 9 5 6 HELIX 18 18 LEU B 24 GLY B 32 1 9 HELIX 19 19 ASP B 41 THR B 43 5 3 HELIX 20 20 ASN B 50 GLU B 65 1 16 HELIX 21 21 SER B 78 GLY B 92 1 15 HELIX 22 22 ALA B 107 ASN B 113 1 7 HELIX 23 23 GLY B 114 PHE B 122 1 9 HELIX 24 24 ASP B 134 GLN B 149 1 16 HELIX 25 25 PRO B 157 SER B 161 5 5 HELIX 26 26 ALA B 166 CYS B 180 1 15 HELIX 27 27 ALA B 196 MET B 210 1 15 HELIX 28 28 SER B 223 LEU B 242 1 20 HELIX 29 29 ASN B 265 GLY B 280 1 16 HELIX 30 30 TYR B 287 GLN B 301 1 15 HELIX 31 31 GLY B 317 PRO B 319 5 3 HELIX 32 32 ALA B 320 HIS B 325 1 6 HELIX 33 33 LEU C 24 GLY C 32 1 9 HELIX 34 34 ASP C 41 THR C 43 5 3 HELIX 35 35 ASN C 50 GLU C 65 1 16 HELIX 36 36 SER C 78 GLY C 92 1 15 HELIX 37 37 ALA C 107 ASN C 113 1 7 HELIX 38 38 GLY C 114 PHE C 122 1 9 HELIX 39 39 ASP C 134 GLN C 149 1 16 HELIX 40 40 PRO C 157 SER C 161 5 5 HELIX 41 41 ALA C 166 GLU C 181 1 16 HELIX 42 42 ALA C 196 MET C 210 1 15 HELIX 43 43 SER C 223 LEU C 242 1 20 HELIX 44 44 ASN C 265 GLY C 280 1 16 HELIX 45 45 TYR C 287 GLN C 301 1 15 HELIX 46 46 GLY C 317 PRO C 319 5 3 HELIX 47 47 ALA C 320 HIS C 325 1 6 HELIX 48 48 HIS D 5 PHE D 9 5 5 HELIX 49 49 LEU D 24 GLY D 32 1 9 HELIX 50 50 ASP D 41 THR D 43 5 3 HELIX 51 51 ASN D 50 GLU D 65 1 16 HELIX 52 52 SER D 78 GLY D 92 1 15 HELIX 53 53 ALA D 107 ASN D 113 1 7 HELIX 54 54 GLY D 114 PHE D 122 1 9 HELIX 55 55 ASP D 134 GLN D 149 1 16 HELIX 56 56 PRO D 157 SER D 161 5 5 HELIX 57 57 SER D 162 GLU D 181 1 20 HELIX 58 58 ALA D 196 MET D 210 1 15 HELIX 59 59 SER D 223 LEU D 242 1 20 HELIX 60 60 ASN D 265 GLY D 280 1 16 HELIX 61 61 TYR D 287 GLN D 301 1 15 HELIX 62 62 GLY D 317 PRO D 319 5 3 HELIX 63 63 ALA D 320 HIS D 325 1 6 SHEET 1 A 6 LEU A 21 TYR A 23 0 SHEET 2 A 6 ILE A 35 ARG A 39 -1 O ILE A 37 N GLU A 22 SHEET 3 A 6 ILE A 310 HIS A 314 1 O PHE A 312 N LYS A 38 SHEET 4 A 6 SER A 188 SER A 193 1 N VAL A 190 O LEU A 311 SHEET 5 A 6 GLU A 214 THR A 219 1 O ILE A 216 N VAL A 189 SHEET 6 A 6 HIS A 251 TRP A 253 1 O HIS A 251 N GLY A 217 SHEET 1 B 4 GLN A 125 MET A 128 0 SHEET 2 B 4 HIS A 94 GLU A 100 1 N ALA A 97 O GLU A 127 SHEET 3 B 4 THR A 69 ALA A 75 1 N THR A 72 O LEU A 98 SHEET 4 B 4 PRO A 153 VAL A 155 1 O TYR A 154 N ILE A 71 SHEET 1 C 6 LEU B 21 TYR B 23 0 SHEET 2 C 6 ILE B 35 ARG B 39 -1 O ILE B 37 N GLU B 22 SHEET 3 C 6 ILE B 310 HIS B 314 1 O ILE B 310 N TYR B 36 SHEET 4 C 6 SER B 188 SER B 193 1 N VAL B 190 O LEU B 311 SHEET 5 C 6 GLU B 214 THR B 219 1 O GLU B 214 N VAL B 189 SHEET 6 C 6 HIS B 251 TRP B 253 1 O HIS B 251 N GLY B 217 SHEET 1 D 4 GLN B 125 MET B 128 0 SHEET 2 D 4 HIS B 94 GLU B 100 1 N ALA B 97 O GLU B 127 SHEET 3 D 4 THR B 69 ALA B 75 1 N THR B 72 O LEU B 98 SHEET 4 D 4 PRO B 153 VAL B 155 1 O TYR B 154 N ILE B 71 SHEET 1 E 6 LEU C 21 TYR C 23 0 SHEET 2 E 6 ILE C 35 ARG C 39 -1 O ILE C 37 N GLU C 22 SHEET 3 E 6 ILE C 310 HIS C 314 1 O PHE C 312 N TYR C 36 SHEET 4 E 6 SER C 188 SER C 193 1 N VAL C 190 O LEU C 311 SHEET 5 E 6 GLU C 214 THR C 219 1 O VAL C 218 N SER C 193 SHEET 6 E 6 HIS C 251 TRP C 253 1 O TRP C 253 N GLY C 217 SHEET 1 F 4 GLN C 125 MET C 128 0 SHEET 2 F 4 HIS C 94 GLU C 100 1 N ALA C 97 O GLU C 127 SHEET 3 F 4 THR C 69 ALA C 75 1 N THR C 72 O LEU C 98 SHEET 4 F 4 PRO C 153 VAL C 155 1 O TYR C 154 N ILE C 71 SHEET 1 G 6 LEU D 21 TYR D 23 0 SHEET 2 G 6 ILE D 35 ARG D 39 -1 O ILE D 37 N GLU D 22 SHEET 3 G 6 ILE D 310 HIS D 314 1 O PHE D 312 N LYS D 38 SHEET 4 G 6 SER D 188 SER D 193 1 N VAL D 190 O ILE D 313 SHEET 5 G 6 GLU D 214 THR D 219 1 O ILE D 216 N VAL D 189 SHEET 6 G 6 HIS D 251 TRP D 253 1 O TRP D 253 N GLY D 217 SHEET 1 H 4 GLN D 125 MET D 128 0 SHEET 2 H 4 HIS D 94 GLU D 100 1 N ALA D 97 O GLN D 125 SHEET 3 H 4 THR D 69 ALA D 75 1 N THR D 72 O LEU D 98 SHEET 4 H 4 PRO D 153 VAL D 155 1 O TYR D 154 N ILE D 71 CISPEP 1 ALA A 258 PRO A 259 0 8.91 CISPEP 2 HIS A 325 PRO A 326 0 0.36 CISPEP 3 VAL B 184 GLY B 185 0 6.60 CISPEP 4 ALA B 258 PRO B 259 0 9.57 CISPEP 5 HIS B 325 PRO B 326 0 0.88 CISPEP 6 ALA C 258 PRO C 259 0 4.01 CISPEP 7 HIS C 325 PRO C 326 0 -3.54 CISPEP 8 ALA D 258 PRO D 259 0 4.90 CISPEP 9 HIS D 325 PRO D 326 0 2.32 SITE 1 AC1 3 TYR A 30 LEU A 31 ILE A 296 SITE 1 AC2 19 ASN A 50 LYS A 51 LYS A 54 SER A 78 SITE 2 AC2 19 ASN A 79 SER A 161 GLY A 194 SER A 195 SITE 3 AC2 19 ALA A 196 GLY A 197 THR A 198 TYR A 287 SITE 4 AC2 19 THR A 315 GLY A 316 GLY A 317 HOH A 501 SITE 5 AC2 19 HOH A 527 HOH A 534 HOH A 539 SITE 1 AC3 4 TYR B 30 LEU B 31 TYR C 30 LEU C 31 SITE 1 AC4 16 ASN B 50 LYS B 51 LYS B 54 SER B 78 SITE 2 AC4 16 ASN B 79 GLY B 194 SER B 195 ALA B 196 SITE 3 AC4 16 GLY B 197 THR B 198 TYR B 287 THR B 315 SITE 4 AC4 16 GLY B 316 GLY B 317 HOH B 507 HOH B 511 SITE 1 AC5 17 ASN C 50 LYS C 51 SER C 78 ASN C 79 SITE 2 AC5 17 SER C 161 GLY C 194 SER C 195 ALA C 196 SITE 3 AC5 17 THR C 198 TYR C 287 THR C 315 GLY C 316 SITE 4 AC5 17 GLY C 317 HOH C 501 HOH C 535 HOH C 546 SITE 5 AC5 17 HOH C 550 SITE 1 AC6 3 TYR D 30 LEU D 31 ILE D 296 SITE 1 AC7 19 ASN D 50 LYS D 51 LYS D 54 SER D 78 SITE 2 AC7 19 ASN D 79 HIS D 80 GLY D 159 GLY D 194 SITE 3 AC7 19 SER D 195 ALA D 196 GLY D 197 THR D 198 SITE 4 AC7 19 TYR D 287 THR D 315 GLY D 316 GLY D 317 SITE 5 AC7 19 HOH D 502 HOH D 506 HOH D 549 CRYST1 66.420 165.840 68.060 90.00 119.03 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015056 0.000000 0.008356 0.00000 SCALE2 0.000000 0.006030 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016804 0.00000