PDB Short entry for 4GNR HEADER TRANSPORT PROTEIN 17-AUG-12 4GNR TITLE 1.0 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE BRANCHED-CHAIN AMINO TITLE 2 ACID TRANSPORTER SUBSTRATE BINDING PROTEIN LIVJ FROM STREPTOCOCCUS TITLE 3 PNEUMONIAE STR. CANADA MDR_19A IN COMPLEX WITH ISOLEUCINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN-BRANCHED CHAIN COMPND 3 AMINO ACID TRANSPORT; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: BRANCHED-CHAIN AMINO ACID TRANSPORTER SUBSTRATE BINDING COMPND 6 PROTEIN LIVJ; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 637987; SOURCE 4 STRAIN: CANADA MDR_19A; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P15TV KEYWDS AMINO ACID-BINDING PROTEIN, SURFACE-EXPOSED PROTEIN, VACCINE, KEYWDS 2 INFECTION, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 3 INFECTIOUS DISEASES, CSGID, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 4 INFECTIOUS DISEASES, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.S.HALAVATY,M.KUDRITSKA,Z.WAWRZAK,P.J.STOGIOS,V.YIM,A.SAVCHENKO, AUTHOR 2 W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 3 13-SEP-23 4GNR 1 REMARK SEQADV LINK REVDAT 2 15-NOV-17 4GNR 1 REMARK REVDAT 1 05-SEP-12 4GNR 0 JRNL AUTH A.S.HALAVATY,M.KUDRITSKA,Z.WAWRZAK,P.J.STOGIOS,V.YIM, JRNL AUTH 2 A.SAVCHENKO,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 1.0 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE JRNL TITL 2 BRANCHED-CHAIN AMINO ACID TRANSPORTER SUBSTRATE BINDING JRNL TITL 3 PROTEIN LIVJ FROM STREPTOCOCCUS PNEUMONIAE STR. CANADA JRNL TITL 4 MDR_19A IN COMPLEX WITH ISOLEUCINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 151086 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.127 REMARK 3 R VALUE (WORKING SET) : 0.126 REMARK 3 FREE R VALUE : 0.147 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7976 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 11036 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 599 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2582 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 613 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 7.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.10000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.022 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.023 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.014 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.559 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.975 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3018 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1958 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4127 ; 1.747 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4881 ; 1.084 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 427 ; 3.470 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 129 ;33.509 ;27.054 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 523 ; 8.186 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 6.454 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 458 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3631 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 572 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1980 ; 1.410 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 811 ; 2.572 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3210 ; 2.105 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1038 ; 2.917 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 917 ; 4.383 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3018 ; 1.317 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4GNR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BE-LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 159549 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1Z18 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN AT 66 MG/ML, CRYSTALLIZATION REMARK 280 CONDITION: PEG 4K 30% W/V MG CHLORIDE 0.2M TRIS0.1M, PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.40950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 465 VAL A 36 REMARK 465 GLU A 37 REMARK 465 GLU A 38 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 274 137.54 81.49 REMARK 500 THR A 290 -34.32 -131.10 REMARK 500 THR A 290 -31.81 -131.10 REMARK 500 ASP A 348 40.36 -141.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 229 OD2 REMARK 620 2 HOH A 737 O 95.9 REMARK 620 3 HOH A1080 O 88.4 167.9 REMARK 620 4 HOH A1081 O 88.8 85.3 83.5 REMARK 620 5 HOH A1082 O 172.4 91.7 84.2 92.0 REMARK 620 6 HOH A1083 O 88.3 84.9 106.6 169.4 92.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 605 O REMARK 620 2 HOH A 656 O 87.5 REMARK 620 3 HOH A 861 O 91.8 91.0 REMARK 620 4 HOH A1105 O 176.7 90.4 90.9 REMARK 620 5 HOH A1106 O 92.5 176.2 85.3 89.7 REMARK 620 6 HOH A1107 O 89.1 94.9 174.1 88.5 88.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1085 O REMARK 620 2 HOH A1088 O 90.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ILE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP91963 RELATED DB: TARGETTRACK DBREF 4GNR A 35 386 UNP C1CQL0 C1CQL0_STRZT 35 386 SEQADV 4GNR GLY A 34 UNP C1CQL0 EXPRESSION TAG SEQRES 1 A 353 GLY SER VAL GLU GLU LYS THR ILE LYS ILE GLY PHE ASN SEQRES 2 A 353 PHE GLU GLU SER GLY SER LEU ALA ALA TYR GLY THR ALA SEQRES 3 A 353 GLU GLN LYS GLY ALA GLN LEU ALA VAL ASP GLU ILE ASN SEQRES 4 A 353 ALA ALA GLY GLY ILE ASP GLY LYS GLN ILE GLU VAL VAL SEQRES 5 A 353 ASP LYS ASP ASN LYS SER GLU THR ALA GLU ALA ALA SER SEQRES 6 A 353 VAL THR THR ASN LEU VAL THR GLN SER LYS VAL SER ALA SEQRES 7 A 353 VAL VAL GLY PRO ALA THR SER GLY ALA THR ALA ALA ALA SEQRES 8 A 353 VAL ALA ASN ALA THR LYS ALA GLY VAL PRO LEU ILE SER SEQRES 9 A 353 PRO SER ALA THR GLN ASP GLY LEU THR LYS GLY GLN ASP SEQRES 10 A 353 TYR LEU PHE ILE GLY THR PHE GLN ASP SER PHE GLN GLY SEQRES 11 A 353 LYS ILE ILE SER ASN TYR VAL SER GLU LYS LEU ASN ALA SEQRES 12 A 353 LYS LYS VAL VAL LEU TYR THR ASP ASN ALA SER ASP TYR SEQRES 13 A 353 ALA LYS GLY ILE ALA LYS SER PHE ARG GLU SER TYR LYS SEQRES 14 A 353 GLY GLU ILE VAL ALA ASP GLU THR PHE VAL ALA GLY ASP SEQRES 15 A 353 THR ASP PHE GLN ALA ALA LEU THR LYS MET LYS GLY LYS SEQRES 16 A 353 ASP PHE ASP ALA ILE VAL VAL PRO GLY TYR TYR ASN GLU SEQRES 17 A 353 ALA GLY LYS ILE VAL ASN GLN ALA ARG GLY MET GLY ILE SEQRES 18 A 353 ASP LYS PRO ILE VAL GLY GLY ASP GLY PHE ASN GLY GLU SEQRES 19 A 353 GLU PHE VAL GLN GLN ALA THR ALA GLU LYS ALA SER ASN SEQRES 20 A 353 ILE TYR PHE ILE SER GLY PHE SER THR THR VAL GLU VAL SEQRES 21 A 353 SER ALA LYS ALA LYS ALA PHE LEU ASP ALA TYR ARG ALA SEQRES 22 A 353 LYS TYR ASN GLU GLU PRO SER THR PHE ALA ALA LEU ALA SEQRES 23 A 353 TYR ASP SER VAL HIS LEU VAL ALA ASN ALA ALA LYS GLY SEQRES 24 A 353 ALA LYS ASN SER GLY GLU ILE LYS ASP ASN LEU ALA MLY SEQRES 25 A 353 THR LYS ASP PHE GLU GLY VAL THR GLY GLN THR SER PHE SEQRES 26 A 353 ASP ALA ASP HIS ASN THR VAL LYS THR ALA TYR MET MET SEQRES 27 A 353 THR MET ASN ASN GLY LYS VAL GLU ALA ALA GLU VAL VAL SEQRES 28 A 353 LYS PRO MODRES 4GNR MLY A 345 LYS N-DIMETHYL-LYSINE HET MLY A 345 11 HET ILE A 401 9 HET MG A 402 1 HET MG A 403 1 HET MG A 404 1 HET CL A 405 1 HET CL A 406 1 HETNAM MLY N-DIMETHYL-LYSINE HETNAM ILE ISOLEUCINE HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 1 MLY C8 H18 N2 O2 FORMUL 2 ILE C6 H13 N O2 FORMUL 3 MG 3(MG 2+) FORMUL 6 CL 2(CL 1-) FORMUL 8 HOH *613(H2 O) HELIX 1 1 LEU A 53 ALA A 74 1 22 HELIX 2 2 GLU A 92 GLN A 106 1 15 HELIX 3 3 THR A 117 ALA A 131 1 15 HELIX 4 4 GLN A 158 LYS A 173 1 16 HELIX 5 5 SER A 187 TYR A 201 1 15 HELIX 6 6 PHE A 218 GLY A 227 1 10 HELIX 7 7 TYR A 238 MET A 252 1 15 HELIX 8 8 GLY A 261 ASN A 265 5 5 HELIX 9 9 GLY A 266 THR A 274 1 9 HELIX 10 10 SER A 294 ASN A 309 1 16 HELIX 11 11 SER A 313 LYS A 331 1 19 HELIX 12 12 ASN A 335 MLY A 345 1 11 SHEET 1 A 5 GLN A 81 ASP A 88 0 SHEET 2 A 5 THR A 40 PHE A 47 1 N ILE A 41 O GLU A 83 SHEET 3 A 5 ALA A 111 VAL A 113 1 O ALA A 111 N GLY A 44 SHEET 4 A 5 LEU A 135 SER A 137 1 O ILE A 136 N VAL A 112 SHEET 5 A 5 LEU A 152 ILE A 154 1 O PHE A 153 N SER A 137 SHEET 1 B 7 GLU A 204 PHE A 211 0 SHEET 2 B 7 LYS A 178 ASP A 184 1 N LEU A 181 O ALA A 207 SHEET 3 B 7 ALA A 232 VAL A 234 1 O VAL A 234 N VAL A 180 SHEET 4 B 7 ILE A 258 GLY A 260 1 O VAL A 259 N ILE A 233 SHEET 5 B 7 ILE A 281 SER A 285 1 O TYR A 282 N GLY A 260 SHEET 6 B 7 ALA A 368 ASN A 374 -1 O MET A 371 N PHE A 283 SHEET 7 B 7 LYS A 377 VAL A 384 -1 O GLU A 379 N THR A 372 SHEET 1 C 2 PHE A 349 GLY A 351 0 SHEET 2 C 2 GLY A 354 THR A 356 -1 O GLY A 354 N GLY A 351 LINK C ALA A 344 N MLY A 345 1555 1555 1.34 LINK C MLY A 345 N THR A 346 1555 1555 1.33 LINK OD2AASP A 229 MG A MG A 403 1555 1555 2.14 LINK MG MG A 402 O HOH A 605 1555 1555 1.97 LINK MG MG A 402 O HOH A 656 1555 1555 2.05 LINK MG MG A 402 O HOH A 861 1555 1555 2.07 LINK MG MG A 402 O HOH A1105 1555 1555 2.03 LINK MG MG A 402 O HOH A1106 1555 1555 2.08 LINK MG MG A 402 O HOH A1107 1555 1555 1.99 LINK MG A MG A 403 O HOH A 737 1555 1555 2.05 LINK MG A MG A 403 O AHOH A1080 1555 1555 2.18 LINK MG A MG A 403 O HOH A1081 1555 1555 2.02 LINK MG A MG A 403 O HOH A1082 1555 1555 2.01 LINK MG A MG A 403 O HOH A1083 1555 1555 2.26 LINK MG A MG A 404 O AHOH A1085 1555 1555 2.26 LINK MG A MG A 404 O HOH A1088 1555 1555 2.01 CISPEP 1 GLY A 114 PRO A 115 0 6.67 SITE 1 AC1 12 TYR A 56 ALA A 116 THR A 117 SER A 118 SITE 2 AC1 12 SER A 139 ALA A 140 THR A 141 TYR A 189 SITE 3 AC1 12 TYR A 238 ASP A 262 GLY A 263 PHE A 315 SITE 1 AC2 6 HOH A 605 HOH A 656 HOH A 861 HOH A1105 SITE 2 AC2 6 HOH A1106 HOH A1107 SITE 1 AC3 6 ASP A 229 HOH A 737 HOH A1080 HOH A1081 SITE 2 AC3 6 HOH A1082 HOH A1083 SITE 1 AC4 5 ASP A 302 HOH A 975 HOH A1085 HOH A1087 SITE 2 AC4 5 HOH A1088 SITE 1 AC5 4 ASN A 247 GLN A 248 HOH A 573 HOH A1009 SITE 1 AC6 3 ASP A 255 LYS A 256 HOH A1112 CRYST1 37.274 72.819 57.542 90.00 105.10 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026828 0.000000 0.007241 0.00000 SCALE2 0.000000 0.013733 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018000 0.00000