PDB Short entry for 4GT3 HEADER TRANSFERASE 28-AUG-12 4GT3 TITLE ATP-BOUND FORM OF THE ERK2 KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAP KINASE 1, MAPK 1, ERT1, EXTRACELLULAR SIGNAL-REGULATED COMPND 5 KINASE 2, ERK-2, MAP KINASE ISOFORM P42, P42-MAPK, MITOGEN-ACTIVATED COMPND 6 PROTEIN KINASE 2, MAP KINASE 2, MAPK 2; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: BROWN RAT,RAT,RATS; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: MAPK1, ERK2, MAPK, PRKM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.POZHARSKI,J.ZHANG,P.SHAPIRO REVDAT 1 12-SEP-12 4GT3 0 JRNL AUTH E.POZHARSKI,J.ZHANG,P.SHAPIRO JRNL TITL ATP-BOUND FORM OF THE ERK2 KINASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 41255 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2071 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2895 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.4010 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.4380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2779 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.72000 REMARK 3 B22 (A**2) : 2.39000 REMARK 3 B33 (A**2) : -1.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.43000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.331 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3074 ; 0.022 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4204 ; 2.292 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 386 ; 6.420 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;38.740 ;23.706 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 511 ;15.590 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.294 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 466 ; 0.175 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2346 ; 0.013 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 30 REMARK 3 ORIGIN FOR THE GROUP (A): -11.2924 18.1167 1.0977 REMARK 3 T TENSOR REMARK 3 T11: 0.3447 T22: 0.3674 REMARK 3 T33: 0.2162 T12: 0.1843 REMARK 3 T13: 0.0023 T23: 0.1386 REMARK 3 L TENSOR REMARK 3 L11: 8.0013 L22: 8.2947 REMARK 3 L33: 10.1613 L12: 1.7982 REMARK 3 L13: -2.4065 L23: 0.2490 REMARK 3 S TENSOR REMARK 3 S11: -0.0237 S12: 0.4113 S13: 0.9507 REMARK 3 S21: -0.2594 S22: 0.5907 S23: 0.3581 REMARK 3 S31: -1.5542 S32: -0.9317 S33: -0.5670 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 38 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0130 20.0280 6.9963 REMARK 3 T TENSOR REMARK 3 T11: 0.4604 T22: 0.1750 REMARK 3 T33: 0.2650 T12: -0.0125 REMARK 3 T13: 0.0203 T23: -0.0980 REMARK 3 L TENSOR REMARK 3 L11: 27.4788 L22: 3.4983 REMARK 3 L33: 5.2553 L12: 1.1920 REMARK 3 L13: -11.2111 L23: -2.0154 REMARK 3 S TENSOR REMARK 3 S11: 0.3104 S12: -0.5618 S13: 1.0361 REMARK 3 S21: 0.6870 S22: 0.0385 S23: -0.1351 REMARK 3 S31: -0.4538 S32: 0.1893 S33: -0.3489 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 59 REMARK 3 ORIGIN FOR THE GROUP (A): -8.4405 12.1302 2.9876 REMARK 3 T TENSOR REMARK 3 T11: 0.2099 T22: 0.2490 REMARK 3 T33: 0.1158 T12: 0.0375 REMARK 3 T13: -0.0257 T23: 0.0346 REMARK 3 L TENSOR REMARK 3 L11: 9.9472 L22: 2.9947 REMARK 3 L33: 6.0291 L12: 0.6599 REMARK 3 L13: -4.4090 L23: -2.3297 REMARK 3 S TENSOR REMARK 3 S11: -0.1180 S12: 0.3141 S13: 0.2346 REMARK 3 S21: 0.0732 S22: 0.3856 S23: 0.2697 REMARK 3 S31: -0.5514 S32: -0.8125 S33: -0.2676 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 60 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5483 10.3751 4.5938 REMARK 3 T TENSOR REMARK 3 T11: 0.1257 T22: 0.1974 REMARK 3 T33: 0.1055 T12: -0.0551 REMARK 3 T13: -0.0704 T23: 0.0223 REMARK 3 L TENSOR REMARK 3 L11: 4.9926 L22: 13.6793 REMARK 3 L33: 7.7798 L12: 4.9370 REMARK 3 L13: -1.1800 L23: -2.5872 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: -0.0832 S13: 0.1490 REMARK 3 S21: 0.3782 S22: -0.0714 S23: -0.4111 REMARK 3 S31: -0.4003 S32: 0.6329 S33: 0.0811 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 72 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): -2.3657 6.5086 3.5921 REMARK 3 T TENSOR REMARK 3 T11: 0.1380 T22: 0.1234 REMARK 3 T33: 0.0971 T12: -0.0053 REMARK 3 T13: -0.0295 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 0.1501 L22: 0.8182 REMARK 3 L33: 4.2970 L12: -0.3211 REMARK 3 L13: 0.7106 L23: -1.3209 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: -0.0306 S13: -0.0191 REMARK 3 S21: -0.1017 S22: 0.0973 S23: 0.1039 REMARK 3 S31: -0.0135 S32: -0.1683 S33: -0.0959 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 174 REMARK 3 ORIGIN FOR THE GROUP (A): 0.0550 6.1507 22.2607 REMARK 3 T TENSOR REMARK 3 T11: 0.0357 T22: 0.0365 REMARK 3 T33: 0.0600 T12: 0.0274 REMARK 3 T13: 0.0095 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 3.0138 L22: 2.1886 REMARK 3 L33: 1.9360 L12: -0.4751 REMARK 3 L13: 0.1365 L23: 0.5932 REMARK 3 S TENSOR REMARK 3 S11: 0.0507 S12: -0.0217 S13: 0.2721 REMARK 3 S21: -0.0970 S22: -0.0530 S23: 0.1420 REMARK 3 S31: -0.1739 S32: -0.2477 S33: 0.0022 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 175 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 24.8660 9.4356 20.1202 REMARK 3 T TENSOR REMARK 3 T11: 0.1599 T22: 0.2042 REMARK 3 T33: 0.1811 T12: -0.0033 REMARK 3 T13: 0.0041 T23: -0.0601 REMARK 3 L TENSOR REMARK 3 L11: 5.1062 L22: 12.2774 REMARK 3 L33: 4.9041 L12: 6.3496 REMARK 3 L13: 3.1783 L23: 5.7625 REMARK 3 S TENSOR REMARK 3 S11: -0.3864 S12: 0.5521 S13: 0.0062 REMARK 3 S21: -0.4525 S22: 0.4485 S23: -0.0256 REMARK 3 S31: -0.3025 S32: 0.1529 S33: -0.0620 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 186 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3957 12.8132 27.3849 REMARK 3 T TENSOR REMARK 3 T11: 0.0616 T22: 0.0163 REMARK 3 T33: 0.1604 T12: -0.0073 REMARK 3 T13: 0.0165 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 3.4119 L22: 1.4732 REMARK 3 L33: 2.5389 L12: 0.7351 REMARK 3 L13: 0.7883 L23: 0.2241 REMARK 3 S TENSOR REMARK 3 S11: -0.0354 S12: 0.0711 S13: 0.5621 REMARK 3 S21: -0.0178 S22: -0.0086 S23: -0.0607 REMARK 3 S31: -0.2854 S32: 0.0174 S33: 0.0439 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 237 A 252 REMARK 3 ORIGIN FOR THE GROUP (A): 21.8747 9.3184 37.5709 REMARK 3 T TENSOR REMARK 3 T11: 0.1821 T22: 0.1198 REMARK 3 T33: 0.1619 T12: -0.0050 REMARK 3 T13: -0.0105 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 7.3989 L22: 1.5473 REMARK 3 L33: 3.6956 L12: 3.1941 REMARK 3 L13: 1.1303 L23: -0.2792 REMARK 3 S TENSOR REMARK 3 S11: 0.1475 S12: -0.3872 S13: 0.2081 REMARK 3 S21: 0.0277 S22: -0.1996 S23: 0.0701 REMARK 3 S31: 0.1887 S32: 0.0609 S33: 0.0522 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 253 A 294 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5330 9.6835 38.3349 REMARK 3 T TENSOR REMARK 3 T11: 0.0968 T22: 0.0834 REMARK 3 T33: 0.0674 T12: -0.0077 REMARK 3 T13: 0.0076 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 2.3719 L22: 1.7505 REMARK 3 L33: 1.4126 L12: 1.8121 REMARK 3 L13: 0.8493 L23: 0.0135 REMARK 3 S TENSOR REMARK 3 S11: 0.1853 S12: -0.3246 S13: 0.0668 REMARK 3 S21: 0.1828 S22: -0.2383 S23: 0.0260 REMARK 3 S31: 0.0111 S32: -0.1280 S33: 0.0530 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 295 A 310 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8111 -2.4387 31.9614 REMARK 3 T TENSOR REMARK 3 T11: 0.0850 T22: 0.0465 REMARK 3 T33: 0.0711 T12: -0.0058 REMARK 3 T13: -0.0386 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 7.3188 L22: 2.1864 REMARK 3 L33: 1.8202 L12: 2.7909 REMARK 3 L13: -0.3624 L23: 1.0253 REMARK 3 S TENSOR REMARK 3 S11: 0.1138 S12: -0.0983 S13: -0.3518 REMARK 3 S21: 0.2671 S22: 0.0214 S23: -0.3120 REMARK 3 S31: 0.2018 S32: -0.0245 S33: -0.1352 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 311 A 328 REMARK 3 ORIGIN FOR THE GROUP (A): 0.5648 -8.0897 22.8362 REMARK 3 T TENSOR REMARK 3 T11: 0.0375 T22: 0.0607 REMARK 3 T33: 0.1846 T12: 0.0318 REMARK 3 T13: -0.0240 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 4.2032 L22: 4.5057 REMARK 3 L33: 2.3925 L12: 3.7132 REMARK 3 L13: -0.3847 L23: -0.2526 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: 0.0837 S13: -0.4229 REMARK 3 S21: -0.0639 S22: -0.0099 S23: 0.0330 REMARK 3 S31: 0.1447 S32: -0.1206 S33: -0.0101 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 329 A 334 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8693 2.2610 4.8617 REMARK 3 T TENSOR REMARK 3 T11: 0.2788 T22: 0.4283 REMARK 3 T33: 0.2935 T12: -0.0122 REMARK 3 T13: 0.0485 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 13.9994 L22: 28.9177 REMARK 3 L33: 14.4262 L12: -16.8826 REMARK 3 L13: 3.2691 L23: -14.7551 REMARK 3 S TENSOR REMARK 3 S11: 0.6330 S12: 0.5741 S13: 0.0464 REMARK 3 S21: -1.0963 S22: -0.8112 S23: -0.1558 REMARK 3 S31: 0.6047 S32: 0.3203 S33: 0.1782 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 335 A 356 REMARK 3 ORIGIN FOR THE GROUP (A): 5.8066 5.6694 -5.0783 REMARK 3 T TENSOR REMARK 3 T11: 0.1208 T22: 0.1183 REMARK 3 T33: 0.0615 T12: 0.0037 REMARK 3 T13: -0.0253 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 9.2127 L22: 4.5896 REMARK 3 L33: 6.1940 L12: 1.2297 REMARK 3 L13: 0.4072 L23: 0.5224 REMARK 3 S TENSOR REMARK 3 S11: -0.0579 S12: 0.0532 S13: -0.4061 REMARK 3 S21: -0.3591 S22: 0.0598 S23: -0.2449 REMARK 3 S31: 0.2115 S32: 0.5058 S33: -0.0019 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 4GT3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-12. REMARK 100 THE RCSB ID CODE IS RCSB074598. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74850 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.357 REMARK 200 RESOLUTION RANGE LOW (A) : 38.302 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.26900 REMARK 200 R SYM FOR SHELL (I) : 0.26914 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5, 5% PEG400, 2M REMARK 280 AMMONIUM SULFATE, SITTING DROP VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.62950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 ARG A 357 REMARK 465 SER A 358 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 10 CG CD OE1 OE2 REMARK 470 MET A 11 CG SD CE REMARK 470 VAL A 12 CG1 CG2 REMARK 470 ARG A 13 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 VAL A 16 CG1 CG2 REMARK 470 ASN A 25 CG OD1 ND2 REMARK 470 LYS A 52 CD CE NZ REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 LYS A 112 CD CE NZ REMARK 470 GLU A 184 CG CD OE1 OE2 REMARK 470 LYS A 201 CE NZ REMARK 470 ARG A 223 NE CZ NH1 NH2 REMARK 470 LYS A 229 CG CD CE NZ REMARK 470 LYS A 257 CE NZ REMARK 470 LYS A 268 CE NZ REMARK 470 ARG A 275 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 328 CG CD CE NZ REMARK 470 ASP A 334 CG OD1 OD2 REMARK 470 ASP A 335 CG OD1 OD2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 542 O HOH A 605 1.97 REMARK 500 NE2 HIS A 178 O HOH A 643 2.09 REMARK 500 O HOH A 637 O HOH A 670 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 527 O HOH A 565 1454 2.12 REMARK 500 O HOH A 558 O HOH A 573 1656 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 75 NE - CZ - NH1 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 192 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP A 249 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 249 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 13 73.76 24.67 REMARK 500 ASN A 25 71.76 37.74 REMARK 500 TYR A 34 31.30 -158.54 REMARK 500 ARG A 146 -14.59 79.79 REMARK 500 ASP A 165 76.71 66.94 REMARK 500 ASP A 173 70.66 -151.17 REMARK 500 ASN A 199 20.96 -159.16 REMARK 500 PHE A 226 65.92 -117.21 REMARK 500 HIS A 230 -176.23 -175.14 REMARK 500 LEU A 292 48.39 -94.02 REMARK 500 ASP A 334 -63.72 -23.11 REMARK 500 ASP A 335 -77.72 143.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASP A 334 24.8 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 693 DISTANCE = 5.08 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 656 O REMARK 620 2 HOH A 698 O 94.4 REMARK 620 3 HOH A 618 O 88.1 94.2 REMARK 620 4 HOH A 639 O 92.2 170.8 92.4 REMARK 620 5 HOH A 699 O 171.3 82.8 83.9 91.6 REMARK 620 6 HOH A 657 O 96.7 81.2 173.6 91.8 91.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 660 O REMARK 620 2 HOH A 588 O 89.2 REMARK 620 3 ATP A 402 O2B 92.1 166.1 REMARK 620 4 ASN A 152 OD1 89.9 101.0 92.8 REMARK 620 5 ATP A 402 O2G 89.3 88.2 78.0 170.8 REMARK 620 6 ASP A 165 OD2 164.8 75.6 102.7 93.0 90.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GSB RELATED DB: PDB REMARK 900 RELATED ID: 4GVA RELATED DB: PDB DBREF 4GT3 A 1 358 UNP P63086 MK01_RAT 1 358 SEQADV 4GT3 HIS A -5 UNP P63086 EXPRESSION TAG SEQADV 4GT3 HIS A -4 UNP P63086 EXPRESSION TAG SEQADV 4GT3 HIS A -3 UNP P63086 EXPRESSION TAG SEQADV 4GT3 HIS A -2 UNP P63086 EXPRESSION TAG SEQADV 4GT3 HIS A -1 UNP P63086 EXPRESSION TAG SEQADV 4GT3 HIS A 0 UNP P63086 EXPRESSION TAG SEQRES 1 A 364 HIS HIS HIS HIS HIS HIS MET ALA ALA ALA ALA ALA ALA SEQRES 2 A 364 GLY PRO GLU MET VAL ARG GLY GLN VAL PHE ASP VAL GLY SEQRES 3 A 364 PRO ARG TYR THR ASN LEU SER TYR ILE GLY GLU GLY ALA SEQRES 4 A 364 TYR GLY MET VAL CYS SER ALA TYR ASP ASN LEU ASN LYS SEQRES 5 A 364 VAL ARG VAL ALA ILE LYS LYS ILE SER PRO PHE GLU HIS SEQRES 6 A 364 GLN THR TYR CYS GLN ARG THR LEU ARG GLU ILE LYS ILE SEQRES 7 A 364 LEU LEU ARG PHE ARG HIS GLU ASN ILE ILE GLY ILE ASN SEQRES 8 A 364 ASP ILE ILE ARG ALA PRO THR ILE GLU GLN MET LYS ASP SEQRES 9 A 364 VAL TYR ILE VAL GLN ASP LEU MET GLU THR ASP LEU TYR SEQRES 10 A 364 LYS LEU LEU LYS THR GLN HIS LEU SER ASN ASP HIS ILE SEQRES 11 A 364 CYS TYR PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS TYR SEQRES 12 A 364 ILE HIS SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO SEQRES 13 A 364 SER ASN LEU LEU LEU ASN THR THR CME ASP LEU LYS ILE SEQRES 14 A 364 CYS ASP PHE GLY LEU ALA ARG VAL ALA ASP PRO ASP HIS SEQRES 15 A 364 ASP HIS THR GLY PHE LEU THR GLU TYR VAL ALA THR ARG SEQRES 16 A 364 TRP TYR ARG ALA PRO GLU ILE MET LEU ASN SER LYS GLY SEQRES 17 A 364 TYR THR LYS SER ILE ASP ILE TRP SER VAL GLY CYS ILE SEQRES 18 A 364 LEU ALA GLU MET LEU SER ASN ARG PRO ILE PHE PRO GLY SEQRES 19 A 364 LYS HIS TYR LEU ASP GLN LEU ASN HIS ILE LEU GLY ILE SEQRES 20 A 364 LEU GLY SER PRO SER GLN GLU ASP LEU ASN CYS ILE ILE SEQRES 21 A 364 ASN LEU LYS ALA ARG ASN TYR LEU LEU SER LEU PRO HIS SEQRES 22 A 364 LYS ASN LYS VAL PRO TRP ASN ARG LEU PHE PRO ASN ALA SEQRES 23 A 364 ASP SER LYS ALA LEU ASP LEU LEU ASP LYS MET LEU THR SEQRES 24 A 364 PHE ASN PRO HIS LYS ARG ILE GLU VAL GLU GLN ALA LEU SEQRES 25 A 364 ALA HIS PRO TYR LEU GLU GLN TYR TYR ASP PRO SER ASP SEQRES 26 A 364 GLU PRO ILE ALA GLU ALA PRO PHE LYS PHE ASP MET GLU SEQRES 27 A 364 LEU ASP ASP LEU PRO LYS GLU LYS LEU LYS GLU LEU ILE SEQRES 28 A 364 PHE GLU GLU THR ALA ARG PHE GLN PRO GLY TYR ARG SER MODRES 4GT3 CME A 159 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE HET CME A 159 10 HET GOL A 401 6 HET ATP A 402 31 HET MG A 403 1 HET MG A 404 1 HET GOL A 405 6 HET GOL A 406 6 HET PEG A 407 7 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM GOL GLYCEROL HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CME C5 H11 N O3 S2 FORMUL 2 GOL 3(C3 H8 O3) FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 MG 2(MG 2+) FORMUL 8 PEG C4 H10 O3 FORMUL 9 HOH *200(H2 O) HELIX 1 1 HIS A 59 PHE A 76 1 18 HELIX 2 2 LEU A 110 GLN A 117 1 8 HELIX 3 3 SER A 120 ALA A 141 1 22 HELIX 4 4 LYS A 149 SER A 151 5 3 HELIX 5 5 ASP A 173 ASP A 177 5 5 HELIX 6 6 THR A 188 ARG A 192 5 5 HELIX 7 7 ALA A 193 ASN A 199 1 7 HELIX 8 8 LYS A 205 ASN A 222 1 18 HELIX 9 9 HIS A 230 GLY A 243 1 14 HELIX 10 10 SER A 246 CYS A 252 1 7 HELIX 11 11 ASN A 255 LEU A 265 1 11 HELIX 12 12 PRO A 272 PHE A 277 1 6 HELIX 13 13 ASP A 281 LEU A 292 1 12 HELIX 14 14 GLU A 301 ALA A 307 1 7 HELIX 15 15 HIS A 308 GLU A 312 5 5 HELIX 16 16 ASP A 316 GLU A 320 5 5 HELIX 17 17 PRO A 337 THR A 349 1 13 HELIX 18 18 ALA A 350 GLN A 353 5 4 SHEET 1 A 5 TYR A 23 GLU A 31 0 SHEET 2 A 5 GLY A 35 ASP A 42 -1 O VAL A 37 N GLY A 30 SHEET 3 A 5 VAL A 47 ILE A 54 -1 O VAL A 49 N ALA A 40 SHEET 4 A 5 VAL A 99 ASP A 104 -1 O VAL A 99 N ILE A 54 SHEET 5 A 5 ASP A 86 ILE A 88 -1 N ASP A 86 O VAL A 102 SHEET 1 B 3 THR A 108 ASP A 109 0 SHEET 2 B 3 LEU A 153 LEU A 155 -1 O LEU A 155 N THR A 108 SHEET 3 B 3 LEU A 161 ILE A 163 -1 O LYS A 162 N LEU A 154 SHEET 1 C 2 VAL A 143 LEU A 144 0 SHEET 2 C 2 ARG A 170 VAL A 171 -1 O ARG A 170 N LEU A 144 LINK C THR A 158 N CME A 159 1555 1555 1.32 LINK C CME A 159 N ASP A 160 1555 1555 1.33 LINK MG MG A 404 O HOH A 656 1555 1555 1.87 LINK MG MG A 404 O HOH A 698 1555 1555 2.01 LINK MG MG A 403 O HOH A 660 1555 1555 2.02 LINK MG MG A 404 O HOH A 618 1555 1555 2.02 LINK MG MG A 403 O HOH A 588 1555 1555 2.03 LINK MG MG A 404 O HOH A 639 1555 1555 2.04 LINK O2B ATP A 402 MG MG A 403 1555 1555 2.08 LINK OD1 ASN A 152 MG MG A 403 1555 1555 2.08 LINK MG MG A 404 O HOH A 699 1555 1555 2.14 LINK MG MG A 404 O HOH A 657 1555 1555 2.22 LINK O2G ATP A 402 MG MG A 403 1555 1555 2.24 LINK OD2 ASP A 165 MG MG A 403 1555 1555 2.25 CISPEP 1 GLY A 20 PRO A 21 0 4.94 CISPEP 2 ASP A 334 ASP A 335 0 -8.12 SITE 1 AC1 4 LEU A 182 HIS A 230 TYR A 231 LEU A 232 SITE 1 AC2 16 ILE A 29 GLU A 31 VAL A 37 ALA A 50 SITE 2 AC2 16 GLN A 103 ASP A 104 MET A 106 ASP A 109 SITE 3 AC2 16 ASN A 152 CYS A 164 ASP A 165 MG A 403 SITE 4 AC2 16 HOH A 588 HOH A 658 HOH A 659 HOH A 660 SITE 1 AC3 5 ASN A 152 ASP A 165 ATP A 402 HOH A 588 SITE 2 AC3 5 HOH A 660 SITE 1 AC4 6 HOH A 618 HOH A 639 HOH A 656 HOH A 657 SITE 2 AC4 6 HOH A 698 HOH A 699 SITE 1 AC5 6 LEU A 73 LEU A 74 PHE A 76 ARG A 77 SITE 2 AC5 6 GLY A 83 ILE A 84 SITE 1 AC6 3 ASP A 316 SER A 318 ASP A 319 SITE 1 AC7 3 LYS A 115 THR A 116 HIS A 118 CRYST1 48.629 69.259 59.816 90.00 109.03 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020564 0.000000 0.007093 0.00000 SCALE2 0.000000 0.014439 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017684 0.00000