PDB Short entry for 4GXO HEADER TRANSCRIPTION 04-SEP-12 4GXO TITLE CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS PROTEIN SARZ MUTANT C13E COMPND MOL_ID: 1; COMPND 2 MOLECULE: MARR FAMILY REGULATORY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 426430; SOURCE 4 STRAIN: NEWMAN; SOURCE 5 GENE: NWMN_2286, SARZ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS TRANSCRIPTIONAL REGULATOR, TRANSCRIPTION, STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR F.SUN,Y.DING,Q.JI,Z.LIANG,X.DENG,C.C.WONG,C.YI,L.ZHANG,S.XIE, AUTHOR 2 S.ALVAREZ,L.M.HICKS,C.LUO,H.JIANG,L.LAN,C.HE REVDAT 3 28-FEB-24 4GXO 1 REMARK SEQADV REVDAT 2 03-OCT-12 4GXO 1 JRNL REVDAT 1 26-SEP-12 4GXO 0 JRNL AUTH F.SUN,Y.DING,Q.JI,Z.LIANG,X.DENG,C.C.WONG,C.YI,L.ZHANG, JRNL AUTH 2 S.XIE,S.ALVAREZ,L.M.HICKS,C.LUO,H.JIANG,L.LAN,C.HE JRNL TITL PROTEIN CYSTEINE PHOSPHORYLATION OF SARA/MGRA FAMILY JRNL TITL 2 TRANSCRIPTIONAL REGULATORS MEDIATES BACTERIAL VIRULENCE AND JRNL TITL 3 ANTIBIOTIC RESISTANCE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 15461 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22927394 JRNL DOI 10.1073/PNAS.1205952109 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 18598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1262 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2275 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.59000 REMARK 3 B22 (A**2) : 0.56000 REMARK 3 B33 (A**2) : 1.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.242 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.204 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.132 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2368 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2347 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3179 ; 1.176 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5427 ; 0.776 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 284 ; 5.489 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 113 ;36.623 ;25.221 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 482 ;18.121 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;15.233 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 360 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2616 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 516 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7553 2.4419 -11.1973 REMARK 3 T TENSOR REMARK 3 T11: 0.0913 T22: 0.0841 REMARK 3 T33: 0.0429 T12: 0.0455 REMARK 3 T13: 0.0315 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 0.5061 L22: 1.7531 REMARK 3 L33: 1.5614 L12: 0.1989 REMARK 3 L13: 0.2696 L23: -0.9741 REMARK 3 S TENSOR REMARK 3 S11: 0.0476 S12: 0.0694 S13: 0.0478 REMARK 3 S21: 0.1918 S22: 0.0513 S23: 0.1553 REMARK 3 S31: -0.3056 S32: -0.1143 S33: -0.0989 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 139 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7583 -9.7401 -21.8103 REMARK 3 T TENSOR REMARK 3 T11: 0.0786 T22: 0.0946 REMARK 3 T33: 0.0378 T12: 0.0402 REMARK 3 T13: 0.0033 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.3177 L22: 0.5530 REMARK 3 L33: 1.6391 L12: 0.4801 REMARK 3 L13: -1.0031 L23: -0.5472 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: 0.1221 S13: -0.0265 REMARK 3 S21: -0.1494 S22: -0.0014 S23: -0.0309 REMARK 3 S31: 0.1105 S32: -0.0232 S33: -0.0367 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4GXO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074762. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0782 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18598 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, 25% POLYETHYLENE REMARK 280 GLYCOL 3,350, PH 5.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.72100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.63000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.89600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.63000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.72100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.89600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 142 REMARK 465 LYS B 140 REMARK 465 ASN B 141 REMARK 465 PHE B 142 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 GOL A 201 O HOH A 309 2.05 REMARK 500 ND2 ASN B 29 O HOH B 244 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 45 CG MET A 45 SD 0.156 REMARK 500 PRO B 108 CD PRO B 108 N 0.155 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 108 C - N - CD ANGL. DEV. = -25.2 DEGREES REMARK 500 PRO B 108 CA - N - CD ANGL. DEV. = -9.4 DEGREES REMARK 500 PRO B 108 N - CA - C ANGL. DEV. = -16.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 4 -6.81 71.23 REMARK 500 GLU A 33 -52.11 -29.48 REMARK 500 ASP A 80 32.67 75.78 REMARK 500 GLU B 48 44.18 -86.94 REMARK 500 ASN B 49 -62.40 72.33 REMARK 500 SER B 107 -11.61 83.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 203 DBREF 4GXO A 7 142 UNP A6QJM6 A6QJM6_STAAE 7 142 DBREF 4GXO B 7 142 UNP A6QJM6 A6QJM6_STAAE 7 142 SEQADV 4GXO GLY A 3 UNP A6QJM6 EXPRESSION TAG SEQADV 4GXO SER A 4 UNP A6QJM6 EXPRESSION TAG SEQADV 4GXO HIS A 5 UNP A6QJM6 EXPRESSION TAG SEQADV 4GXO MET A 6 UNP A6QJM6 EXPRESSION TAG SEQADV 4GXO GLU A 13 UNP A6QJM6 CYS 13 ENGINEERED MUTATION SEQADV 4GXO GLY B 3 UNP A6QJM6 EXPRESSION TAG SEQADV 4GXO SER B 4 UNP A6QJM6 EXPRESSION TAG SEQADV 4GXO HIS B 5 UNP A6QJM6 EXPRESSION TAG SEQADV 4GXO MET B 6 UNP A6QJM6 EXPRESSION TAG SEQADV 4GXO GLU B 13 UNP A6QJM6 CYS 13 ENGINEERED MUTATION SEQRES 1 A 140 GLY SER HIS MET TYR LEU SER LYS GLN LEU GLU PHE LEU SEQRES 2 A 140 PHE TYR VAL SER SER LYS GLU ILE ILE LYS LYS TYR THR SEQRES 3 A 140 ASN TYR LEU LYS GLU TYR ASP LEU THR TYR THR GLY TYR SEQRES 4 A 140 ILE VAL LEU MET ALA ILE GLU ASN ASP GLU LYS LEU ASN SEQRES 5 A 140 ILE LYS LYS LEU GLY GLU ARG VAL PHE LEU ASP SER GLY SEQRES 6 A 140 THR LEU THR PRO LEU LEU LYS LYS LEU GLU LYS LYS ASP SEQRES 7 A 140 TYR VAL VAL ARG THR ARG GLU GLU LYS ASP GLU ARG ASN SEQRES 8 A 140 LEU GLN ILE SER LEU THR GLU GLN GLY LYS ALA ILE LYS SEQRES 9 A 140 SER PRO LEU ALA GLU ILE SER VAL LYS VAL PHE ASN GLU SEQRES 10 A 140 PHE ASN ILE SER GLU ARG GLU ALA SER ASP ILE ILE ASN SEQRES 11 A 140 ASN LEU ARG ASN PHE VAL SER LYS ASN PHE SEQRES 1 B 140 GLY SER HIS MET TYR LEU SER LYS GLN LEU GLU PHE LEU SEQRES 2 B 140 PHE TYR VAL SER SER LYS GLU ILE ILE LYS LYS TYR THR SEQRES 3 B 140 ASN TYR LEU LYS GLU TYR ASP LEU THR TYR THR GLY TYR SEQRES 4 B 140 ILE VAL LEU MET ALA ILE GLU ASN ASP GLU LYS LEU ASN SEQRES 5 B 140 ILE LYS LYS LEU GLY GLU ARG VAL PHE LEU ASP SER GLY SEQRES 6 B 140 THR LEU THR PRO LEU LEU LYS LYS LEU GLU LYS LYS ASP SEQRES 7 B 140 TYR VAL VAL ARG THR ARG GLU GLU LYS ASP GLU ARG ASN SEQRES 8 B 140 LEU GLN ILE SER LEU THR GLU GLN GLY LYS ALA ILE LYS SEQRES 9 B 140 SER PRO LEU ALA GLU ILE SER VAL LYS VAL PHE ASN GLU SEQRES 10 B 140 PHE ASN ILE SER GLU ARG GLU ALA SER ASP ILE ILE ASN SEQRES 11 B 140 ASN LEU ARG ASN PHE VAL SER LYS ASN PHE HET GOL A 201 6 HET GOL A 202 6 HET GOL A 203 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 HOH *90(H2 O) HELIX 1 1 SER A 4 LYS A 32 1 29 HELIX 2 2 THR A 37 ILE A 47 1 11 HELIX 3 3 ILE A 55 PHE A 63 1 9 HELIX 4 4 ASP A 65 LYS A 79 1 15 HELIX 5 5 THR A 99 ILE A 105 1 7 HELIX 6 6 ILE A 105 ALA A 110 1 6 HELIX 7 7 GLU A 111 GLU A 119 1 9 HELIX 8 8 SER A 123 SER A 139 1 17 HELIX 9 9 SER B 4 LYS B 32 1 29 HELIX 10 10 GLU B 33 ASP B 35 5 3 HELIX 11 11 THR B 37 ILE B 47 1 11 HELIX 12 12 ILE B 55 PHE B 63 1 9 HELIX 13 13 ASP B 65 LYS B 79 1 15 HELIX 14 14 THR B 99 LYS B 106 1 8 HELIX 15 15 PRO B 108 ALA B 110 5 3 HELIX 16 16 GLU B 111 GLU B 119 1 9 HELIX 17 17 SER B 123 VAL B 138 1 16 SHEET 1 A 3 LEU A 53 ASN A 54 0 SHEET 2 A 3 ASP A 90 LEU A 98 -1 O ILE A 96 N LEU A 53 SHEET 3 A 3 VAL A 82 GLU A 87 -1 N THR A 85 O GLN A 95 SHEET 1 B 3 LYS B 52 ASN B 54 0 SHEET 2 B 3 LEU B 94 LEU B 98 -1 O ILE B 96 N LEU B 53 SHEET 3 B 3 VAL B 82 ARG B 86 -1 N THR B 85 O GLN B 95 SITE 1 AC1 4 GLU A 13 PHE A 14 HOH A 309 ILE B 42 SITE 1 AC2 5 PHE A 117 ASN A 118 ASN A 121 ILE A 122 SITE 2 AC2 5 LEU B 8 SITE 1 AC3 7 HIS A 5 PHE B 117 ASN B 118 ILE B 122 SITE 2 AC3 7 SER B 123 GLU B 124 HOH B 221 CRYST1 45.442 55.792 119.260 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022006 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017924 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008385 0.00000