PDB Short entry for 4H0S HEADER HYDROLASE 10-SEP-12 4H0S TITLE CRYSTAL STRUCTURE ANALYSIS OF A BASIC PHOSPHOLIPASE A2 FROM TITLE 2 TRIMERESURUS STEJNEGERI VENOM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BASIC PHOSPHOLIPASE A2 HOMOLOG CTS-R6; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: SVPLA2 HOMOLOG; COMPND 5 EC: 3.1.1.4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIRIDOVIPERA STEJNEGERI; SOURCE 3 ORGANISM_COMMON: CHINESE GREEN TREE VIPER; SOURCE 4 ORGANISM_TAXID: 39682 KEYWDS ALPHA-HELIX, GLYCEROPHOSPHOLIPID, VENOM GLAND, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.ZENG,L.NIU,X.LI,M.TENG REVDAT 2 13-SEP-23 4H0S 1 REMARK REVDAT 1 19-SEP-12 4H0S 0 JRNL AUTH F.ZENG,L.NIU,X.LI,M.TENG JRNL TITL CRYSTAL STRUCTURE ANALYSIS OF A BASIC PHOSPHOLIPASE A2 FROM JRNL TITL 2 TRIMERESURUS STEJNEGERI VENOM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 48372 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2587 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3548 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2599 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 281 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.33000 REMARK 3 B22 (A**2) : -0.67000 REMARK 3 B33 (A**2) : 1.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.35000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.087 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.548 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2728 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3708 ; 1.066 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 350 ; 4.855 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;37.600 ;24.857 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 453 ;12.078 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;14.698 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 401 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2037 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1760 ; 2.128 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2831 ; 3.627 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 968 ; 3.558 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 877 ; 5.245 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2728 ; 1.015 ; 1.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4H0S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074874. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97916 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50982 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.43300 REMARK 200 R SYM FOR SHELL (I) : 0.34800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1B4W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M SODIUM CHLORIDE, 16% PEG6000, REMARK 280 0.015 MM CYMAL-7, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.97300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.71800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.97300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.71800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 313 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 316 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 351 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 ARG A -14 REMARK 465 THR A -13 REMARK 465 LEU A -12 REMARK 465 LEU A -11 REMARK 465 ILE A -10 REMARK 465 MET A -9 REMARK 465 ALA A -8 REMARK 465 VAL A -7 REMARK 465 LEU A -6 REMARK 465 LEU A -5 REMARK 465 LEU A -4 REMARK 465 GLY A -3 REMARK 465 VAL A -2 REMARK 465 GLU A -1 REMARK 465 GLY A 0 REMARK 465 ALA A 32 REMARK 465 GLY A 33 REMARK 465 ARG A 34 REMARK 465 MET B -15 REMARK 465 ARG B -14 REMARK 465 THR B -13 REMARK 465 LEU B -12 REMARK 465 LEU B -11 REMARK 465 ILE B -10 REMARK 465 MET B -9 REMARK 465 ALA B -8 REMARK 465 VAL B -7 REMARK 465 LEU B -6 REMARK 465 LEU B -5 REMARK 465 LEU B -4 REMARK 465 GLY B -3 REMARK 465 VAL B -2 REMARK 465 GLU B -1 REMARK 465 GLY B 0 REMARK 465 MET B 31 REMARK 465 ALA B 32 REMARK 465 GLY B 33 REMARK 465 VAL B 127 REMARK 465 LYS B 128 REMARK 465 VAL B 129 REMARK 465 SER B 130 REMARK 465 MET C -15 REMARK 465 ARG C -14 REMARK 465 THR C -13 REMARK 465 LEU C -12 REMARK 465 LEU C -11 REMARK 465 ILE C -10 REMARK 465 MET C -9 REMARK 465 ALA C -8 REMARK 465 VAL C -7 REMARK 465 LEU C -6 REMARK 465 LEU C -5 REMARK 465 LEU C -4 REMARK 465 GLY C -3 REMARK 465 VAL C -2 REMARK 465 GLU C -1 REMARK 465 GLY C 0 REMARK 465 ALA C 32 REMARK 465 GLY C 33 REMARK 465 ARG C 34 REMARK 465 THR C 59 REMARK 465 SER C 60 REMARK 465 SER C 130 REMARK 465 THR C 131 REMARK 465 PRO C 132 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 CE NZ REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 LYS A 92 CD CE NZ REMARK 470 LYS A 114 CG CD CE NZ REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 PHE A 119 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR A 122 OG1 CG2 REMARK 470 VAL A 127 CG1 CG2 REMARK 470 LYS A 128 CG CD CE NZ REMARK 470 VAL A 129 CG1 CG2 REMARK 470 LYS B 7 NZ REMARK 470 ARG B 34 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 36 CE NZ REMARK 470 GLU B 78 OE1 REMARK 470 LYS B 115 CE NZ REMARK 470 THR B 122 OG1 CG2 REMARK 470 SER B 124 OG REMARK 470 SER B 125 OG REMARK 470 THR B 131 OG1 CG2 REMARK 470 LEU C 3 CD1 CD2 REMARK 470 LYS C 24 CE NZ REMARK 470 MET C 31 SD CE REMARK 470 LYS C 54 CG CD CE NZ REMARK 470 VAL C 55 CG1 CG2 REMARK 470 GLU C 86 CG CD OE1 OE2 REMARK 470 LYS C 88 CG CD CE NZ REMARK 470 ASP C 94 CG OD1 OD2 REMARK 470 ARG C 116 NE CZ NH1 NH2 REMARK 470 THR C 122 OG1 REMARK 470 VAL C 127 CG1 CG2 REMARK 470 LYS C 128 CG CD CE NZ REMARK 470 VAL C 129 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE B 119 52.44 -115.00 REMARK 500 ASN C 14 16.28 59.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 75 OH REMARK 620 2 HOH B 331 O 113.7 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4H0Q RELATED DB: PDB DBREF 4H0S A -15 133 UNP Q6H3D7 PA2BH_TRIST 1 137 DBREF 4H0S B -15 133 UNP Q6H3D7 PA2BH_TRIST 1 137 DBREF 4H0S C -15 133 UNP Q6H3D7 PA2BH_TRIST 1 137 SEQRES 1 A 137 MET ARG THR LEU LEU ILE MET ALA VAL LEU LEU LEU GLY SEQRES 2 A 137 VAL GLU GLY SER LEU LEU GLN LEU ARG LYS MET ILE LYS SEQRES 3 A 137 LYS MET THR ASN LYS GLU PRO ILE LEU SER TYR SER LYS SEQRES 4 A 137 TYR GLY CYS ASN CYS GLY MET ALA GLY ARG GLY LYS PRO SEQRES 5 A 137 VAL ASP ALA THR ASP THR CYS CYS SER ILE HIS ASN CYS SEQRES 6 A 137 CYS TYR GLY LYS VAL THR SER CYS SER THR LYS TRP ASP SEQRES 7 A 137 SER TYR SER TYR SER TRP GLU ASN GLY ASP ILE VAL CYS SEQRES 8 A 137 ASP GLU LYS HIS PRO CYS LYS ASP VAL CYS GLU CYS ASP SEQRES 9 A 137 LYS ALA VAL ALA THR CYS PHE ARG ASP ASN LEU ASP THR SEQRES 10 A 137 TYR LYS LYS ARG ASN ILE PHE HIS PRO THR SER SER CYS SEQRES 11 A 137 VAL LYS VAL SER THR PRO CYS SEQRES 1 B 137 MET ARG THR LEU LEU ILE MET ALA VAL LEU LEU LEU GLY SEQRES 2 B 137 VAL GLU GLY SER LEU LEU GLN LEU ARG LYS MET ILE LYS SEQRES 3 B 137 LYS MET THR ASN LYS GLU PRO ILE LEU SER TYR SER LYS SEQRES 4 B 137 TYR GLY CYS ASN CYS GLY MET ALA GLY ARG GLY LYS PRO SEQRES 5 B 137 VAL ASP ALA THR ASP THR CYS CYS SER ILE HIS ASN CYS SEQRES 6 B 137 CYS TYR GLY LYS VAL THR SER CYS SER THR LYS TRP ASP SEQRES 7 B 137 SER TYR SER TYR SER TRP GLU ASN GLY ASP ILE VAL CYS SEQRES 8 B 137 ASP GLU LYS HIS PRO CYS LYS ASP VAL CYS GLU CYS ASP SEQRES 9 B 137 LYS ALA VAL ALA THR CYS PHE ARG ASP ASN LEU ASP THR SEQRES 10 B 137 TYR LYS LYS ARG ASN ILE PHE HIS PRO THR SER SER CYS SEQRES 11 B 137 VAL LYS VAL SER THR PRO CYS SEQRES 1 C 137 MET ARG THR LEU LEU ILE MET ALA VAL LEU LEU LEU GLY SEQRES 2 C 137 VAL GLU GLY SER LEU LEU GLN LEU ARG LYS MET ILE LYS SEQRES 3 C 137 LYS MET THR ASN LYS GLU PRO ILE LEU SER TYR SER LYS SEQRES 4 C 137 TYR GLY CYS ASN CYS GLY MET ALA GLY ARG GLY LYS PRO SEQRES 5 C 137 VAL ASP ALA THR ASP THR CYS CYS SER ILE HIS ASN CYS SEQRES 6 C 137 CYS TYR GLY LYS VAL THR SER CYS SER THR LYS TRP ASP SEQRES 7 C 137 SER TYR SER TYR SER TRP GLU ASN GLY ASP ILE VAL CYS SEQRES 8 C 137 ASP GLU LYS HIS PRO CYS LYS ASP VAL CYS GLU CYS ASP SEQRES 9 C 137 LYS ALA VAL ALA THR CYS PHE ARG ASP ASN LEU ASP THR SEQRES 10 C 137 TYR LYS LYS ARG ASN ILE PHE HIS PRO THR SER SER CYS SEQRES 11 C 137 VAL LYS VAL SER THR PRO CYS HET NA A 201 1 HET NA A 202 1 HET NA B 201 1 HET NA B 202 1 HET NA C 201 1 HETNAM NA SODIUM ION FORMUL 4 NA 5(NA 1+) FORMUL 9 HOH *281(H2 O) HELIX 1 1 SER A 1 ASN A 14 1 14 HELIX 2 2 GLU A 17 SER A 23 1 7 HELIX 3 3 ASP A 39 LYS A 54 1 16 HELIX 4 4 CYS A 91 ASN A 109 1 18 HELIX 5 5 LYS A 114 HIS A 120 5 7 HELIX 6 6 PRO A 121 CYS A 126 5 5 HELIX 7 7 LEU B 2 ASN B 14 1 13 HELIX 8 8 GLU B 17 SER B 23 1 7 HELIX 9 9 ASP B 39 GLY B 53 1 15 HELIX 10 10 CYS B 91 ASN B 109 1 18 HELIX 11 11 LYS B 114 HIS B 120 5 7 HELIX 12 12 PRO B 121 CYS B 126 5 5 HELIX 13 13 LEU C 2 ASN C 14 1 13 HELIX 14 14 GLU C 17 SER C 23 1 7 HELIX 15 15 ASP C 39 LYS C 54 1 16 HELIX 16 16 CYS C 91 ASN C 109 1 18 HELIX 17 17 LYS C 114 HIS C 120 5 7 SHEET 1 A 2 TYR A 75 GLU A 78 0 SHEET 2 A 2 ASP A 81 CYS A 84 -1 O VAL A 83 N SER A 76 SHEET 1 B 2 TYR B 75 GLU B 78 0 SHEET 2 B 2 ASP B 81 CYS B 84 -1 O VAL B 83 N SER B 76 SHEET 1 C 2 TYR C 75 GLU C 78 0 SHEET 2 C 2 ASP C 81 CYS C 84 -1 O ASP C 81 N GLU C 78 SSBOND 1 CYS A 27 CYS A 126 1555 1555 2.03 SSBOND 2 CYS A 29 CYS A 45 1555 1555 2.04 SSBOND 3 CYS A 44 CYS A 105 1555 1555 2.03 SSBOND 4 CYS A 50 CYS A 133 1555 1555 2.03 SSBOND 5 CYS A 51 CYS A 98 1555 1555 2.04 SSBOND 6 CYS A 61 CYS A 91 1555 1555 2.03 SSBOND 7 CYS A 84 CYS A 96 1555 1555 2.04 SSBOND 8 CYS B 27 CYS B 126 1555 1555 2.04 SSBOND 9 CYS B 29 CYS B 45 1555 1555 2.04 SSBOND 10 CYS B 44 CYS B 105 1555 1555 2.04 SSBOND 11 CYS B 50 CYS B 133 1555 1555 2.06 SSBOND 12 CYS B 51 CYS B 98 1555 1555 2.03 SSBOND 13 CYS B 61 CYS B 91 1555 1555 2.03 SSBOND 14 CYS B 84 CYS B 96 1555 1555 2.04 SSBOND 15 CYS C 27 CYS C 126 1555 1555 2.05 SSBOND 16 CYS C 29 CYS C 45 1555 1555 2.01 SSBOND 17 CYS C 44 CYS C 105 1555 1555 2.03 SSBOND 18 CYS C 50 CYS C 133 1555 1555 2.02 SSBOND 19 CYS C 51 CYS C 98 1555 1555 2.04 SSBOND 20 CYS C 61 CYS C 91 1555 1555 2.03 SSBOND 21 CYS C 84 CYS C 96 1555 1555 2.02 LINK NA NA A 201 O HOH A 315 1555 1555 2.99 LINK OH TYR B 75 NA NA B 201 1555 1555 3.05 LINK NA NA B 201 O HOH B 331 1555 1555 3.06 SITE 1 AC1 3 TRP A 77 HOH A 315 HOH B 378 SITE 1 AC2 2 GLU A 17 ASN B 79 SITE 1 AC3 4 LYS B 7 TYR B 75 TRP B 77 HOH B 331 SITE 1 AC4 3 GLU B 17 ILE B 19 LEU B 20 SITE 1 AC5 2 GLN C 4 LYS C 7 CRYST1 95.946 71.436 53.607 90.00 103.53 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010423 0.000000 0.002509 0.00000 SCALE2 0.000000 0.013999 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019187 0.00000