PDB Short entry for 4IQ1 HEADER TRANSFERASE 10-JAN-13 4IQ1 TITLE CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE MHA_0454 (TARGET EFI- TITLE 2 507015) FROM MANNHEIMIA HAEMOLYTICA, SUBSTRATE-FREE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE TRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MANNHEIMIA HAEMOLYTICA PHL213; SOURCE 3 ORGANISM_TAXID: 272629; SOURCE 4 GENE: MHA_0454; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, GLUTATHIONE, ENZYME FUNCTION INITIATIVE, EFI, STRUCTURAL KEYWDS 2 GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL,E.WASHINGTON, AUTHOR 2 A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS,W.D.ZENCHECK,H.J.IMKER, AUTHOR 3 N.F.AL OBAIDI,M.STEAD,J.LOVE,J.A.GERLT,R.N.ARMSTRONG,S.C.ALMO,ENZYME AUTHOR 4 FUNCTION INITIATIVE (EFI) REVDAT 2 20-SEP-23 4IQ1 1 REMARK SEQADV REVDAT 1 23-JAN-13 4IQ1 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL, JRNL AUTH 2 E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, JRNL AUTH 3 W.D.ZENCHECK,H.J.IMKER,N.F.AL OBAIDI,M.STEAD,J.LOVE, JRNL AUTH 4 J.A.GERLT,R.N.ARMSTRONG,S.C.ALMO, JRNL AUTH 5 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF PROBABLE GLUTATHIONE S-TRANSFERASE JRNL TITL 2 MHA_0454 (TARGET EFI-507015) FROM MANNHEIMIA HAEMOLYTICA, JRNL TITL 3 SUBSTRATE-FREE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0025 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 59436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1882 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4398 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.4510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5050 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 382 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.50000 REMARK 3 B22 (A**2) : -0.40000 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.247 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.623 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5219 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7074 ; 1.333 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 643 ; 5.700 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 264 ;39.279 ;24.053 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 868 ;15.494 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;20.424 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 772 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4027 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5217 ; 4.272 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 123 ;23.124 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5361 ;21.327 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4IQ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000077064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61400 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.86000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2X64 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, PH 5.5, 0.2M LITHIUM REMARK 280 SULFATE, 25% PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 144.32600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 144.32600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.00950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.88800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.00950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.88800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 144.32600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.00950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.88800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 144.32600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.00950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 40.88800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 209 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 MET C -21 REMARK 465 HIS C -20 REMARK 465 HIS C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 SER C -14 REMARK 465 SER C -13 REMARK 465 GLY C -12 REMARK 465 VAL C -11 REMARK 465 ASP C -10 REMARK 465 LEU C -9 REMARK 465 GLY C -8 REMARK 465 THR C -7 REMARK 465 GLU C -6 REMARK 465 ASN C -5 REMARK 465 LEU C -4 REMARK 465 TYR C -3 REMARK 465 PHE C -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B -4 CG CD1 CD2 REMARK 470 GLN C -1 CG CD OE1 NE2 REMARK 470 LYS C 81 CG CD CE NZ REMARK 470 TYR C 118 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU C 120 CG CD OE1 OE2 REMARK 470 ASN C 122 CG OD1 ND2 REMARK 470 ASN C 145 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 65 124.00 81.20 REMARK 500 GLN B 65 121.43 72.73 REMARK 500 ASN B 150 18.52 -141.85 REMARK 500 GLN C 65 106.49 75.62 REMARK 500 SER C 85 173.25 170.97 REMARK 500 PHE C 113 -63.21 -92.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-507015 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4IW9 RELATED DB: PDB DBREF 4IQ1 A 1 209 UNP A7JQU5 A7JQU5_PASHA 1 209 DBREF 4IQ1 B 1 209 UNP A7JQU5 A7JQU5_PASHA 1 209 DBREF 4IQ1 C 1 209 UNP A7JQU5 A7JQU5_PASHA 1 209 SEQADV 4IQ1 MET A -21 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS A -20 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS A -19 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS A -18 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS A -17 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS A -16 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS A -15 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER A -14 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER A -13 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLY A -12 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 VAL A -11 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 ASP A -10 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 LEU A -9 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLY A -8 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 THR A -7 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLU A -6 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 ASN A -5 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 LEU A -4 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 TYR A -3 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 PHE A -2 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLN A -1 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER A 0 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 MET B -21 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS B -20 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS B -19 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS B -18 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS B -17 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS B -16 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS B -15 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER B -14 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER B -13 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLY B -12 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 VAL B -11 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 ASP B -10 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 LEU B -9 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLY B -8 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 THR B -7 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLU B -6 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 ASN B -5 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 LEU B -4 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 TYR B -3 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 PHE B -2 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLN B -1 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER B 0 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 MET C -21 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS C -20 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS C -19 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS C -18 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS C -17 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS C -16 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 HIS C -15 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER C -14 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER C -13 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLY C -12 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 VAL C -11 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 ASP C -10 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 LEU C -9 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLY C -8 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 THR C -7 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLU C -6 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 ASN C -5 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 LEU C -4 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 TYR C -3 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 PHE C -2 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 GLN C -1 UNP A7JQU5 EXPRESSION TAG SEQADV 4IQ1 SER C 0 UNP A7JQU5 EXPRESSION TAG SEQRES 1 A 231 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 231 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU TYR SEQRES 3 A 231 GLY LEU THR GLY ALA CYS SER PHE VAL PRO HIS VAL ALA SEQRES 4 A 231 LEU GLU TRP VAL LYS LEU ARG ALA ASN GLN ASP TYR ALA SEQRES 5 A 231 PHE GLN ALA VAL SER ARG GLU PHE ILE LYS SER ALA GLU SEQRES 6 A 231 TYR LEU ALA LEU ASN PRO ARG GLY ASN VAL PRO LEU LEU SEQRES 7 A 231 VAL ASP GLY ASP LEU ALA LEU THR GLN ASN GLN ALA ILE SEQRES 8 A 231 VAL HIS TYR LEU ASP GLU LEU TYR PRO GLU ALA LYS LEU SEQRES 9 A 231 PHE GLY SER LYS THR ALA ARG ASP LYS ALA LYS ALA ALA SEQRES 10 A 231 ARG TRP LEU ALA PHE PHE ASN SER ASP VAL HIS LYS SER SEQRES 11 A 231 PHE VAL PRO LEU PHE ARG LEU PRO SER TYR ALA GLU GLY SEQRES 12 A 231 ASN GLU THR LEU THR LYS THR ILE ARG GLN GLN SER ALA SEQRES 13 A 231 GLU GLN ILE LEU GLU GLN LEU ALA PHE ALA ASN ALA HIS SEQRES 14 A 231 LEU GLU ASN HIS ILE PHE PHE GLY GLU GLU ILE SER VAL SEQRES 15 A 231 ALA ASP ALA TYR LEU TYR ILE MET LEU ASN TRP CYS ARG SEQRES 16 A 231 LEU LEU GLY LEU ASP PHE SER HIS LEU SER GLN LEU SER SEQRES 17 A 231 ALA PHE MET GLN ARG VAL GLU ALA ASP GLN GLY VAL ASP SEQRES 18 A 231 ASN VAL ARG GLU GLN GLU GLY LEU LYS GLY SEQRES 1 B 231 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 231 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU TYR SEQRES 3 B 231 GLY LEU THR GLY ALA CYS SER PHE VAL PRO HIS VAL ALA SEQRES 4 B 231 LEU GLU TRP VAL LYS LEU ARG ALA ASN GLN ASP TYR ALA SEQRES 5 B 231 PHE GLN ALA VAL SER ARG GLU PHE ILE LYS SER ALA GLU SEQRES 6 B 231 TYR LEU ALA LEU ASN PRO ARG GLY ASN VAL PRO LEU LEU SEQRES 7 B 231 VAL ASP GLY ASP LEU ALA LEU THR GLN ASN GLN ALA ILE SEQRES 8 B 231 VAL HIS TYR LEU ASP GLU LEU TYR PRO GLU ALA LYS LEU SEQRES 9 B 231 PHE GLY SER LYS THR ALA ARG ASP LYS ALA LYS ALA ALA SEQRES 10 B 231 ARG TRP LEU ALA PHE PHE ASN SER ASP VAL HIS LYS SER SEQRES 11 B 231 PHE VAL PRO LEU PHE ARG LEU PRO SER TYR ALA GLU GLY SEQRES 12 B 231 ASN GLU THR LEU THR LYS THR ILE ARG GLN GLN SER ALA SEQRES 13 B 231 GLU GLN ILE LEU GLU GLN LEU ALA PHE ALA ASN ALA HIS SEQRES 14 B 231 LEU GLU ASN HIS ILE PHE PHE GLY GLU GLU ILE SER VAL SEQRES 15 B 231 ALA ASP ALA TYR LEU TYR ILE MET LEU ASN TRP CYS ARG SEQRES 16 B 231 LEU LEU GLY LEU ASP PHE SER HIS LEU SER GLN LEU SER SEQRES 17 B 231 ALA PHE MET GLN ARG VAL GLU ALA ASP GLN GLY VAL ASP SEQRES 18 B 231 ASN VAL ARG GLU GLN GLU GLY LEU LYS GLY SEQRES 1 C 231 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 C 231 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU TYR SEQRES 3 C 231 GLY LEU THR GLY ALA CYS SER PHE VAL PRO HIS VAL ALA SEQRES 4 C 231 LEU GLU TRP VAL LYS LEU ARG ALA ASN GLN ASP TYR ALA SEQRES 5 C 231 PHE GLN ALA VAL SER ARG GLU PHE ILE LYS SER ALA GLU SEQRES 6 C 231 TYR LEU ALA LEU ASN PRO ARG GLY ASN VAL PRO LEU LEU SEQRES 7 C 231 VAL ASP GLY ASP LEU ALA LEU THR GLN ASN GLN ALA ILE SEQRES 8 C 231 VAL HIS TYR LEU ASP GLU LEU TYR PRO GLU ALA LYS LEU SEQRES 9 C 231 PHE GLY SER LYS THR ALA ARG ASP LYS ALA LYS ALA ALA SEQRES 10 C 231 ARG TRP LEU ALA PHE PHE ASN SER ASP VAL HIS LYS SER SEQRES 11 C 231 PHE VAL PRO LEU PHE ARG LEU PRO SER TYR ALA GLU GLY SEQRES 12 C 231 ASN GLU THR LEU THR LYS THR ILE ARG GLN GLN SER ALA SEQRES 13 C 231 GLU GLN ILE LEU GLU GLN LEU ALA PHE ALA ASN ALA HIS SEQRES 14 C 231 LEU GLU ASN HIS ILE PHE PHE GLY GLU GLU ILE SER VAL SEQRES 15 C 231 ALA ASP ALA TYR LEU TYR ILE MET LEU ASN TRP CYS ARG SEQRES 16 C 231 LEU LEU GLY LEU ASP PHE SER HIS LEU SER GLN LEU SER SEQRES 17 C 231 ALA PHE MET GLN ARG VAL GLU ALA ASP GLN GLY VAL ASP SEQRES 18 C 231 ASN VAL ARG GLU GLN GLU GLY LEU LYS GLY HET CL A 301 1 HET GOL A 302 12 HET CL B 301 1 HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 CL 2(CL 1-) FORMUL 5 GOL C3 H8 O3 FORMUL 7 HOH *382(H2 O) HELIX 1 1 SER A 11 ASN A 26 1 16 HELIX 2 2 GLU A 37 LYS A 40 5 4 HELIX 3 3 SER A 41 ASN A 48 1 8 HELIX 4 4 GLN A 65 TYR A 77 1 13 HELIX 5 5 PRO A 78 LYS A 81 5 4 HELIX 6 6 THR A 87 ASP A 104 1 18 HELIX 7 7 ASP A 104 ARG A 114 1 11 HELIX 8 8 PRO A 116 GLU A 120 5 5 HELIX 9 9 ASN A 122 GLU A 149 1 28 HELIX 10 10 SER A 159 GLY A 176 1 18 HELIX 11 11 GLN A 184 ASP A 195 1 12 HELIX 12 12 ASP A 195 GLU A 205 1 11 HELIX 13 13 SER B 11 ASN B 26 1 16 HELIX 14 14 GLU B 37 LYS B 40 5 4 HELIX 15 15 SER B 41 ALA B 46 1 6 HELIX 16 16 GLN B 65 TYR B 77 1 13 HELIX 17 17 PRO B 78 LYS B 81 5 4 HELIX 18 18 THR B 87 ASP B 104 1 18 HELIX 19 19 ASP B 104 ARG B 114 1 11 HELIX 20 20 PRO B 116 GLU B 120 5 5 HELIX 21 21 ASN B 122 LEU B 148 1 27 HELIX 22 22 SER B 159 GLY B 176 1 18 HELIX 23 23 SER B 183 ALA B 194 1 12 HELIX 24 24 ASP B 195 GLY B 206 1 12 HELIX 25 25 SER C 11 ASN C 26 1 16 HELIX 26 26 SER C 35 LYS C 40 1 6 HELIX 27 27 SER C 41 ASN C 48 1 8 HELIX 28 28 GLN C 65 TYR C 77 1 13 HELIX 29 29 PRO C 78 LYS C 81 5 4 HELIX 30 30 THR C 87 ASP C 104 1 18 HELIX 31 31 VAL C 105 SER C 108 5 4 HELIX 32 32 PHE C 109 ARG C 114 1 6 HELIX 33 33 ASN C 122 LEU C 148 1 27 HELIX 34 34 SER C 159 GLY C 176 1 18 HELIX 35 35 GLN C 184 ASP C 195 1 12 HELIX 36 36 ASP C 195 GLU C 205 1 11 SHEET 1 A 4 ALA A 30 ALA A 33 0 SHEET 2 A 4 LYS A 2 GLY A 5 1 N LEU A 3 O GLN A 32 SHEET 3 A 4 LEU A 55 ASP A 58 -1 O VAL A 57 N LYS A 2 SHEET 4 A 4 LEU A 61 THR A 64 -1 O LEU A 63 N LEU A 56 SHEET 1 B 4 ALA B 30 ALA B 33 0 SHEET 2 B 4 LYS B 2 GLY B 5 1 N LEU B 3 O GLN B 32 SHEET 3 B 4 LEU B 55 ASP B 58 -1 O LEU B 55 N TYR B 4 SHEET 4 B 4 LEU B 61 THR B 64 -1 O LEU B 63 N LEU B 56 SHEET 1 C 4 TYR C 29 ALA C 33 0 SHEET 2 C 4 MET C 1 GLY C 5 1 N MET C 1 O ALA C 30 SHEET 3 C 4 LEU C 55 ASP C 58 -1 O VAL C 57 N LYS C 2 SHEET 4 C 4 LEU C 61 LEU C 63 -1 O LEU C 63 N LEU C 56 CISPEP 1 VAL A 53 PRO A 54 0 0.52 CISPEP 2 VAL B 53 PRO B 54 0 4.55 CISPEP 3 VAL C 53 PRO C 54 0 1.05 SITE 1 AC1 4 ASN A 52 THR A 64 GLN A 65 ARG B 96 SITE 1 AC2 11 GLU A 19 LYS A 22 ASP A 28 TYR A 29 SITE 2 AC2 11 GLN A 204 HOH A 450 LYS B 22 ASP B 28 SITE 3 AC2 11 TYR B 29 GLN B 204 HOH B 414 SITE 1 AC3 4 ARG A 96 ASN B 52 THR B 64 GLN B 65 CRYST1 66.019 81.776 288.652 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015147 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012229 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003464 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.201399 -0.644171 -0.737891 -2.42495 1 MTRIX2 2 -0.651666 -0.474299 0.591922 -51.69285 1 MTRIX3 2 -0.731280 0.600070 -0.324261 42.79271 1