PDB Short entry for 4IY7 HEADER LYASE 28-JAN-13 4IY7 TITLE CRYSTAL STRUCTURE OF CYSTATHIONINE GAMMA LYASE (XOMETC) FROM TITLE 2 XANTHOMONAS ORYZAE PV. ORYZAE IN COMPLEX WITH E-SITE SERINE, A-SITE TITLE 3 EXTERNAL ALDIMINE STRUCTURE WITH SERINE AND A-SITE EXTERNAL ALDIMINE TITLE 4 STRUCTURE WITH AMINOACRYLATE INTERMEDIATES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTATHIONINE GAMMA-LYASE-LIKE PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 4.4.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS ORYZAE PV. ORYZAE; SOURCE 3 ORGANISM_TAXID: 291331; SOURCE 4 STRAIN: KACC 10331/KXO85; SOURCE 5 GENE: METB, XOCGL, XOO0778; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS XOCGL, SERINE EXTERNAL SCHIFF BASE, AMINOACRYLATE EXTERNAL SCHIFF KEYWDS 2 BASE, PLP DEPENDENT ENZYME, LYASE, CYS-MET METABOLISM PLP DEPENDENT KEYWDS 3 ENZYME, CYSTATHIONINE GAMMA LYASE, PLP BINDING EXPDTA X-RAY DIFFRACTION AUTHOR H.P.T.NGO,J.K.KIM,L.W.KANG REVDAT 2 26-FEB-14 4IY7 1 JRNL REVDAT 1 29-JAN-14 4IY7 0 JRNL AUTH H.P.NGO,N.M.CERQUEIRA,J.K.KIM,M.K.HONG,P.A.FERNANDES, JRNL AUTH 2 M.J.RAMOS,L.W.KANG JRNL TITL PLP UNDERGOES CONFORMATIONAL CHANGES DURING THE COURSE OF AN JRNL TITL 2 ENZYMATIC REACTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 596 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24531493 JRNL DOI 10.1107/S1399004713031283 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 155517 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.136 REMARK 3 R VALUE (WORKING SET) : 0.134 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8207 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 11352 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE SET COUNT : 609 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11469 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 144 REMARK 3 SOLVENT ATOMS : 1428 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.083 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.085 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.554 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11977 ; 0.030 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 16281 ; 2.262 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1574 ; 6.597 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 478 ;34.215 ;22.887 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1938 ;13.617 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 92 ;21.223 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1867 ; 0.280 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9060 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7684 ; 1.303 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 12299 ; 2.050 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4293 ; 3.587 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3956 ; 5.693 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4IY7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-13. REMARK 100 THE RCSB ID CODE IS RCSB077358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 171413 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 4IXZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25.5% PEG 4000, 0.17M LITHIUM SULFATE, REMARK 280 0.085 TRIS, 15% GLYCEROL, PH 9.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.10950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.99850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.03450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 112.99850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.10950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.03450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK 300 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 300 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 300 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 300 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 300 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 300 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 300 SOFTWARE USED: PISA REMARK 300 TOTAL BURIED SURFACE AREA: 20870 ANGSTROM**2 REMARK 300 SURFACE AREA OF THE COMPLEX: 41620 ANGSTROM**2 REMARK 300 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 300 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 300 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 300 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 300 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 ARG A 4 REMARK 465 THR A 5 REMARK 465 THR A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 HIS A 9 REMARK 465 ASP A 10 REMARK 465 GLY A 11 REMARK 465 ASP A 12 REMARK 465 ARG A 13 REMARK 465 ASN A 395 REMARK 465 GLN A 396 REMARK 465 ASN A 397 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASN B 3 REMARK 465 ARG B 4 REMARK 465 THR B 5 REMARK 465 THR B 6 REMARK 465 HIS B 7 REMARK 465 SER B 8 REMARK 465 HIS B 9 REMARK 465 ASP B 10 REMARK 465 GLY B 11 REMARK 465 ASP B 12 REMARK 465 ARG B 13 REMARK 465 ASN B 395 REMARK 465 GLN B 396 REMARK 465 ASN B 397 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ASN C 3 REMARK 465 ARG C 4 REMARK 465 THR C 5 REMARK 465 THR C 6 REMARK 465 HIS C 7 REMARK 465 SER C 8 REMARK 465 HIS C 9 REMARK 465 ASP C 10 REMARK 465 GLY C 11 REMARK 465 ASP C 12 REMARK 465 ARG C 13 REMARK 465 ASN C 395 REMARK 465 GLN C 396 REMARK 465 ASN C 397 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ASN D 3 REMARK 465 ARG D 4 REMARK 465 THR D 5 REMARK 465 THR D 6 REMARK 465 HIS D 7 REMARK 465 SER D 8 REMARK 465 HIS D 9 REMARK 465 ASP D 10 REMARK 465 GLY D 11 REMARK 465 ASP D 12 REMARK 465 ARG D 13 REMARK 465 ASN D 397 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 798 O HOH C 823 1.86 REMARK 500 NH1 ARG D 304 O HOH D 794 1.98 REMARK 500 OD1 ASP A 370 O HOH A 716 2.03 REMARK 500 O HOH B 622 O HOH B 872 2.03 REMARK 500 NH1 ARG A 266 O HOH A 686 2.07 REMARK 500 O HOH C 828 O HOH C 829 2.10 REMARK 500 O HOH C 631 O HOH C 827 2.15 REMARK 500 O HOH B 538 O HOH B 822 2.15 REMARK 500 O HOH A 503 O HOH A 827 2.16 REMARK 500 O HOH A 835 O HOH A 836 2.18 REMARK 500 O HOH A 503 O HOH A 825 2.18 REMARK 500 O HOH D 758 O HOH D 814 2.18 REMARK 500 O HOH A 766 O HOH A 828 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 57 CD GLU A 57 OE1 0.092 REMARK 500 GLU A 57 CD GLU A 57 OE2 -0.072 REMARK 500 GLU A 233 CG GLU A 233 CD 0.147 REMARK 500 GLU A 286 CG GLU A 286 CD -0.098 REMARK 500 GLU A 338 CD GLU A 338 OE1 -0.076 REMARK 500 GLU A 344 CG GLU A 344 CD 0.115 REMARK 500 GLU A 390 CG GLU A 390 CD 0.102 REMARK 500 ARG B 123 CZ ARG B 123 NH1 0.086 REMARK 500 PHE B 188 CZ PHE B 188 CE2 0.117 REMARK 500 GLU B 338 CD GLU B 338 OE2 -0.129 REMARK 500 GLU B 390 CG GLU B 390 CD 0.101 REMARK 500 PHE C 252 CZ PHE C 252 CE2 0.136 REMARK 500 GLU C 338 CD GLU C 338 OE1 -0.068 REMARK 500 GLU D 233 CG GLU D 233 CD 0.111 REMARK 500 GLU D 338 CD GLU D 338 OE1 -0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 66 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG A 71 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 109 CB - CG - OD1 ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG A 121 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 125 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 147 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 149 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 176 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 176 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 LEU A 193 CB - CG - CD2 ANGL. DEV. = 15.0 DEGREES REMARK 500 ARG A 256 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 GLU A 286 OE1 - CD - OE2 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG A 304 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 304 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 386 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 391 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 PHE B 67 CB - CG - CD2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ASP B 100 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 109 CB - CG - OD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG B 123 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 LEU B 193 CB - CG - CD2 ANGL. DEV. = 12.5 DEGREES REMARK 500 ARG B 195 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 195 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 304 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 304 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ASP B 322 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 LYS B 325 CD - CE - NZ ANGL. DEV. = -14.1 DEGREES REMARK 500 ARG B 374 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 PHE C 67 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ASP C 109 CB - CG - OD1 ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG C 123 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG C 176 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG C 176 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG C 264 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG C 266 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG C 374 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG D 60 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP D 100 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG D 117 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG D 121 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG D 121 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG D 123 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 LEU D 372 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 190 159.51 68.19 REMARK 500 LYS A 210 -120.73 -91.36 REMARK 500 ASN A 228 86.26 -155.25 REMARK 500 SER A 339 176.94 83.38 REMARK 500 MET A 353 -101.23 -103.86 REMARK 500 VAL B 122 -70.25 -116.53 REMARK 500 SER B 190 162.33 65.88 REMARK 500 LYS B 210 -111.53 -94.80 REMARK 500 SER B 339 179.55 82.55 REMARK 500 MET B 353 -102.32 -105.87 REMARK 500 VAL C 122 -66.86 -122.19 REMARK 500 SER C 190 163.00 72.70 REMARK 500 LYS C 210 -117.02 -94.59 REMARK 500 GLU C 332 -52.73 -122.93 REMARK 500 SER C 339 -178.90 85.14 REMARK 500 MET C 353 -97.02 -107.64 REMARK 500 VAL D 122 -71.67 -117.12 REMARK 500 SER D 190 161.69 70.72 REMARK 500 LYS D 210 -121.99 -96.08 REMARK 500 GLU D 332 -52.50 -120.65 REMARK 500 SER D 339 174.71 79.39 REMARK 500 MET D 353 -97.11 -102.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 SER B 59 23.8 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 815 DISTANCE = 5.14 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SER A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0JO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SER B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KOU B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SER C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KOU C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SER D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KOU D 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IXS RELATED DB: PDB REMARK 900 SUBSTRATES COMPLEXED STRUCTURE REMARK 900 RELATED ID: 4IXZ RELATED DB: PDB REMARK 900 SUBSTRATES COMPLEXED STRUCTURE REMARK 900 RELATED ID: 4IYO RELATED DB: PDB DBREF 4IY7 A 1 397 UNP Q5H4T8 Q5H4T8_XANOR 1 397 DBREF 4IY7 B 1 397 UNP Q5H4T8 Q5H4T8_XANOR 1 397 DBREF 4IY7 C 1 397 UNP Q5H4T8 Q5H4T8_XANOR 1 397 DBREF 4IY7 D 1 397 UNP Q5H4T8 Q5H4T8_XANOR 1 397 SEQRES 1 A 397 MET SER ASN ARG THR THR HIS SER HIS ASP GLY ASP ARG SEQRES 2 A 397 ALA LEU SER LEU ALA THR LEU ALA ILE HIS GLY GLY GLN SEQRES 3 A 397 SER PRO ASP PRO SER THR GLY ALA VAL MET PRO PRO ILE SEQRES 4 A 397 TYR ALA THR SER THR TYR ALA GLN SER SER PRO GLY GLU SEQRES 5 A 397 HIS GLN GLY PHE GLU TYR SER ARG THR HIS ASN PRO THR SEQRES 6 A 397 ARG PHE ALA TYR GLU ARG CYS VAL ALA ALA LEU GLU GLY SEQRES 7 A 397 GLY THR ARG ALA PHE ALA PHE ALA SER GLY MET ALA ALA SEQRES 8 A 397 THR SER THR VAL MET GLU LEU LEU ASP ALA GLY SER HIS SEQRES 9 A 397 VAL VAL ALA MET ASP ASP LEU TYR GLY GLY THR PHE ARG SEQRES 10 A 397 LEU PHE GLU ARG VAL ARG ARG ARG THR ALA GLY LEU ASP SEQRES 11 A 397 PHE SER PHE VAL ASP LEU THR ASP PRO ALA ALA PHE LYS SEQRES 12 A 397 ALA ALA ILE ARG ALA ASP THR LYS MET VAL TRP ILE GLU SEQRES 13 A 397 THR PRO THR ASN PRO MET LEU LYS LEU VAL ASP ILE ALA SEQRES 14 A 397 ALA ILE ALA VAL ILE ALA ARG LYS HIS GLY LEU LEU THR SEQRES 15 A 397 VAL VAL ASP ASN THR PHE ALA SER PRO MET LEU GLN ARG SEQRES 16 A 397 PRO LEU SER LEU GLY ALA ASP LEU VAL VAL HIS SER ALA SEQRES 17 A 397 THR LYS TYR LEU ASN GLY HIS SER ASP MET VAL GLY GLY SEQRES 18 A 397 ILE ALA VAL VAL GLY ASP ASN ALA GLU LEU ALA GLU GLN SEQRES 19 A 397 MET ALA PHE LEU GLN ASN SER ILE GLY GLY VAL GLN GLY SEQRES 20 A 397 PRO PHE ASP SER PHE LEU ALA LEU ARG GLY LEU LYS THR SEQRES 21 A 397 LEU PRO LEU ARG MET ARG ALA HIS CYS GLU ASN ALA LEU SEQRES 22 A 397 ALA LEU ALA GLN TRP LEU GLU THR HIS PRO ALA ILE GLU SEQRES 23 A 397 LYS VAL ILE TYR PRO GLY LEU ALA SER HIS PRO GLN HIS SEQRES 24 A 397 VAL LEU ALA LYS ARG GLN MET SER GLY PHE GLY GLY ILE SEQRES 25 A 397 VAL SER ILE VAL LEU LYS GLY GLY PHE ASP ALA ALA LYS SEQRES 26 A 397 ARG PHE CYS GLU LYS THR GLU LEU PHE THR LEU ALA GLU SEQRES 27 A 397 SER LEU GLY GLY VAL GLU SER LEU VAL ASN HIS PRO ALA SEQRES 28 A 397 VAL MET THR HIS ALA SER ILE PRO VAL ALA ARG ARG GLU SEQRES 29 A 397 GLN LEU GLY ILE SER ASP ALA LEU VAL ARG LEU SER VAL SEQRES 30 A 397 GLY ILE GLU ASP LEU GLY ASP LEU ARG GLY ASP LEU GLU SEQRES 31 A 397 ARG ALA LEU VAL ASN GLN ASN SEQRES 1 B 397 MET SER ASN ARG THR THR HIS SER HIS ASP GLY ASP ARG SEQRES 2 B 397 ALA LEU SER LEU ALA THR LEU ALA ILE HIS GLY GLY GLN SEQRES 3 B 397 SER PRO ASP PRO SER THR GLY ALA VAL MET PRO PRO ILE SEQRES 4 B 397 TYR ALA THR SER THR TYR ALA GLN SER SER PRO GLY GLU SEQRES 5 B 397 HIS GLN GLY PHE GLU TYR SER ARG THR HIS ASN PRO THR SEQRES 6 B 397 ARG PHE ALA TYR GLU ARG CYS VAL ALA ALA LEU GLU GLY SEQRES 7 B 397 GLY THR ARG ALA PHE ALA PHE ALA SER GLY MET ALA ALA SEQRES 8 B 397 THR SER THR VAL MET GLU LEU LEU ASP ALA GLY SER HIS SEQRES 9 B 397 VAL VAL ALA MET ASP ASP LEU TYR GLY GLY THR PHE ARG SEQRES 10 B 397 LEU PHE GLU ARG VAL ARG ARG ARG THR ALA GLY LEU ASP SEQRES 11 B 397 PHE SER PHE VAL ASP LEU THR ASP PRO ALA ALA PHE LYS SEQRES 12 B 397 ALA ALA ILE ARG ALA ASP THR LYS MET VAL TRP ILE GLU SEQRES 13 B 397 THR PRO THR ASN PRO MET LEU LYS LEU VAL ASP ILE ALA SEQRES 14 B 397 ALA ILE ALA VAL ILE ALA ARG LYS HIS GLY LEU LEU THR SEQRES 15 B 397 VAL VAL ASP ASN THR PHE ALA SER PRO MET LEU GLN ARG SEQRES 16 B 397 PRO LEU SER LEU GLY ALA ASP LEU VAL VAL HIS SER ALA SEQRES 17 B 397 THR LYS TYR LEU ASN GLY HIS SER ASP MET VAL GLY GLY SEQRES 18 B 397 ILE ALA VAL VAL GLY ASP ASN ALA GLU LEU ALA GLU GLN SEQRES 19 B 397 MET ALA PHE LEU GLN ASN SER ILE GLY GLY VAL GLN GLY SEQRES 20 B 397 PRO PHE ASP SER PHE LEU ALA LEU ARG GLY LEU LYS THR SEQRES 21 B 397 LEU PRO LEU ARG MET ARG ALA HIS CYS GLU ASN ALA LEU SEQRES 22 B 397 ALA LEU ALA GLN TRP LEU GLU THR HIS PRO ALA ILE GLU SEQRES 23 B 397 LYS VAL ILE TYR PRO GLY LEU ALA SER HIS PRO GLN HIS SEQRES 24 B 397 VAL LEU ALA LYS ARG GLN MET SER GLY PHE GLY GLY ILE SEQRES 25 B 397 VAL SER ILE VAL LEU LYS GLY GLY PHE ASP ALA ALA LYS SEQRES 26 B 397 ARG PHE CYS GLU LYS THR GLU LEU PHE THR LEU ALA GLU SEQRES 27 B 397 SER LEU GLY GLY VAL GLU SER LEU VAL ASN HIS PRO ALA SEQRES 28 B 397 VAL MET THR HIS ALA SER ILE PRO VAL ALA ARG ARG GLU SEQRES 29 B 397 GLN LEU GLY ILE SER ASP ALA LEU VAL ARG LEU SER VAL SEQRES 30 B 397 GLY ILE GLU ASP LEU GLY ASP LEU ARG GLY ASP LEU GLU SEQRES 31 B 397 ARG ALA LEU VAL ASN GLN ASN SEQRES 1 C 397 MET SER ASN ARG THR THR HIS SER HIS ASP GLY ASP ARG SEQRES 2 C 397 ALA LEU SER LEU ALA THR LEU ALA ILE HIS GLY GLY GLN SEQRES 3 C 397 SER PRO ASP PRO SER THR GLY ALA VAL MET PRO PRO ILE SEQRES 4 C 397 TYR ALA THR SER THR TYR ALA GLN SER SER PRO GLY GLU SEQRES 5 C 397 HIS GLN GLY PHE GLU TYR SER ARG THR HIS ASN PRO THR SEQRES 6 C 397 ARG PHE ALA TYR GLU ARG CYS VAL ALA ALA LEU GLU GLY SEQRES 7 C 397 GLY THR ARG ALA PHE ALA PHE ALA SER GLY MET ALA ALA SEQRES 8 C 397 THR SER THR VAL MET GLU LEU LEU ASP ALA GLY SER HIS SEQRES 9 C 397 VAL VAL ALA MET ASP ASP LEU TYR GLY GLY THR PHE ARG SEQRES 10 C 397 LEU PHE GLU ARG VAL ARG ARG ARG THR ALA GLY LEU ASP SEQRES 11 C 397 PHE SER PHE VAL ASP LEU THR ASP PRO ALA ALA PHE LYS SEQRES 12 C 397 ALA ALA ILE ARG ALA ASP THR LYS MET VAL TRP ILE GLU SEQRES 13 C 397 THR PRO THR ASN PRO MET LEU LYS LEU VAL ASP ILE ALA SEQRES 14 C 397 ALA ILE ALA VAL ILE ALA ARG LYS HIS GLY LEU LEU THR SEQRES 15 C 397 VAL VAL ASP ASN THR PHE ALA SER PRO MET LEU GLN ARG SEQRES 16 C 397 PRO LEU SER LEU GLY ALA ASP LEU VAL VAL HIS SER ALA SEQRES 17 C 397 THR LYS TYR LEU ASN GLY HIS SER ASP MET VAL GLY GLY SEQRES 18 C 397 ILE ALA VAL VAL GLY ASP ASN ALA GLU LEU ALA GLU GLN SEQRES 19 C 397 MET ALA PHE LEU GLN ASN SER ILE GLY GLY VAL GLN GLY SEQRES 20 C 397 PRO PHE ASP SER PHE LEU ALA LEU ARG GLY LEU LYS THR SEQRES 21 C 397 LEU PRO LEU ARG MET ARG ALA HIS CYS GLU ASN ALA LEU SEQRES 22 C 397 ALA LEU ALA GLN TRP LEU GLU THR HIS PRO ALA ILE GLU SEQRES 23 C 397 LYS VAL ILE TYR PRO GLY LEU ALA SER HIS PRO GLN HIS SEQRES 24 C 397 VAL LEU ALA LYS ARG GLN MET SER GLY PHE GLY GLY ILE SEQRES 25 C 397 VAL SER ILE VAL LEU LYS GLY GLY PHE ASP ALA ALA LYS SEQRES 26 C 397 ARG PHE CYS GLU LYS THR GLU LEU PHE THR LEU ALA GLU SEQRES 27 C 397 SER LEU GLY GLY VAL GLU SER LEU VAL ASN HIS PRO ALA SEQRES 28 C 397 VAL MET THR HIS ALA SER ILE PRO VAL ALA ARG ARG GLU SEQRES 29 C 397 GLN LEU GLY ILE SER ASP ALA LEU VAL ARG LEU SER VAL SEQRES 30 C 397 GLY ILE GLU ASP LEU GLY ASP LEU ARG GLY ASP LEU GLU SEQRES 31 C 397 ARG ALA LEU VAL ASN GLN ASN SEQRES 1 D 397 MET SER ASN ARG THR THR HIS SER HIS ASP GLY ASP ARG SEQRES 2 D 397 ALA LEU SER LEU ALA THR LEU ALA ILE HIS GLY GLY GLN SEQRES 3 D 397 SER PRO ASP PRO SER THR GLY ALA VAL MET PRO PRO ILE SEQRES 4 D 397 TYR ALA THR SER THR TYR ALA GLN SER SER PRO GLY GLU SEQRES 5 D 397 HIS GLN GLY PHE GLU TYR SER ARG THR HIS ASN PRO THR SEQRES 6 D 397 ARG PHE ALA TYR GLU ARG CYS VAL ALA ALA LEU GLU GLY SEQRES 7 D 397 GLY THR ARG ALA PHE ALA PHE ALA SER GLY MET ALA ALA SEQRES 8 D 397 THR SER THR VAL MET GLU LEU LEU ASP ALA GLY SER HIS SEQRES 9 D 397 VAL VAL ALA MET ASP ASP LEU TYR GLY GLY THR PHE ARG SEQRES 10 D 397 LEU PHE GLU ARG VAL ARG ARG ARG THR ALA GLY LEU ASP SEQRES 11 D 397 PHE SER PHE VAL ASP LEU THR ASP PRO ALA ALA PHE LYS SEQRES 12 D 397 ALA ALA ILE ARG ALA ASP THR LYS MET VAL TRP ILE GLU SEQRES 13 D 397 THR PRO THR ASN PRO MET LEU LYS LEU VAL ASP ILE ALA SEQRES 14 D 397 ALA ILE ALA VAL ILE ALA ARG LYS HIS GLY LEU LEU THR SEQRES 15 D 397 VAL VAL ASP ASN THR PHE ALA SER PRO MET LEU GLN ARG SEQRES 16 D 397 PRO LEU SER LEU GLY ALA ASP LEU VAL VAL HIS SER ALA SEQRES 17 D 397 THR LYS TYR LEU ASN GLY HIS SER ASP MET VAL GLY GLY SEQRES 18 D 397 ILE ALA VAL VAL GLY ASP ASN ALA GLU LEU ALA GLU GLN SEQRES 19 D 397 MET ALA PHE LEU GLN ASN SER ILE GLY GLY VAL GLN GLY SEQRES 20 D 397 PRO PHE ASP SER PHE LEU ALA LEU ARG GLY LEU LYS THR SEQRES 21 D 397 LEU PRO LEU ARG MET ARG ALA HIS CYS GLU ASN ALA LEU SEQRES 22 D 397 ALA LEU ALA GLN TRP LEU GLU THR HIS PRO ALA ILE GLU SEQRES 23 D 397 LYS VAL ILE TYR PRO GLY LEU ALA SER HIS PRO GLN HIS SEQRES 24 D 397 VAL LEU ALA LYS ARG GLN MET SER GLY PHE GLY GLY ILE SEQRES 25 D 397 VAL SER ILE VAL LEU LYS GLY GLY PHE ASP ALA ALA LYS SEQRES 26 D 397 ARG PHE CYS GLU LYS THR GLU LEU PHE THR LEU ALA GLU SEQRES 27 D 397 SER LEU GLY GLY VAL GLU SER LEU VAL ASN HIS PRO ALA SEQRES 28 D 397 VAL MET THR HIS ALA SER ILE PRO VAL ALA ARG ARG GLU SEQRES 29 D 397 GLN LEU GLY ILE SER ASP ALA LEU VAL ARG LEU SER VAL SEQRES 30 D 397 GLY ILE GLU ASP LEU GLY ASP LEU ARG GLY ASP LEU GLU SEQRES 31 D 397 ARG ALA LEU VAL ASN GLN ASN HET SER A 401 7 HET GOL A 402 6 HET GOL A 403 6 HET SO4 A 404 5 HET 0JO A 405 21 HET SER B 401 7 HET PYR B 402 6 HET KOU B 403 22 HET SER C 401 7 HET KOU C 402 22 HET SER D 401 7 HET PYR D 402 6 HET KOU D 403 22 HETNAM SER SERINE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM 0JO 2-{[(E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY) HETNAM 2 0JO METHYL]PYRIDIN-4-YL}METHYLIDENE]AMINO}PROP-2-ENOIC HETNAM 3 0JO ACID HETNAM PYR PYRUVIC ACID HETNAM KOU (E)-N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY) HETNAM 2 KOU METHYL]PYRIDIN-4-YL}METHYLIDENE)-L-SERINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 SER 4(C3 H7 N O3) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 SO4 O4 S 2- FORMUL 9 0JO C11 H13 N2 O7 P FORMUL 11 PYR 2(C3 H4 O3) FORMUL 12 KOU 3(C11 H15 N2 O8 P) FORMUL 18 HOH *1428(H2 O) HELIX 1 1 SER A 16 GLY A 24 1 9 HELIX 2 2 ASN A 63 GLY A 78 1 16 HELIX 3 3 SER A 87 GLU A 97 1 11 HELIX 4 4 TYR A 112 VAL A 122 1 11 HELIX 5 5 VAL A 122 GLY A 128 1 7 HELIX 6 6 ASP A 138 ILE A 146 1 9 HELIX 7 7 ASP A 167 HIS A 178 1 12 HELIX 8 8 ARG A 195 GLY A 200 5 6 HELIX 9 9 ASN A 228 GLY A 243 1 16 HELIX 10 10 GLY A 247 LYS A 259 1 13 HELIX 11 11 THR A 260 THR A 281 1 22 HELIX 12 12 GLN A 298 MET A 306 1 9 HELIX 13 13 GLY A 319 THR A 331 1 13 HELIX 14 14 PRO A 359 GLY A 367 1 9 HELIX 15 15 ASP A 381 VAL A 394 1 14 HELIX 16 16 SER B 16 GLY B 24 1 9 HELIX 17 17 ASN B 63 GLY B 78 1 16 HELIX 18 18 SER B 87 GLU B 97 1 11 HELIX 19 19 TYR B 112 VAL B 122 1 11 HELIX 20 20 VAL B 122 GLY B 128 1 7 HELIX 21 21 ASP B 138 ILE B 146 1 9 HELIX 22 22 ASP B 167 HIS B 178 1 12 HELIX 23 23 ARG B 195 GLY B 200 5 6 HELIX 24 24 ASN B 228 GLY B 243 1 16 HELIX 25 25 GLY B 247 LYS B 259 1 13 HELIX 26 26 THR B 260 THR B 281 1 22 HELIX 27 27 GLN B 298 MET B 306 1 9 HELIX 28 28 GLY B 319 THR B 331 1 13 HELIX 29 29 PRO B 359 GLY B 367 1 9 HELIX 30 30 ASP B 381 VAL B 394 1 14 HELIX 31 31 SER C 16 GLY C 24 1 9 HELIX 32 32 ASN C 63 GLY C 78 1 16 HELIX 33 33 SER C 87 GLU C 97 1 11 HELIX 34 34 TYR C 112 VAL C 122 1 11 HELIX 35 35 VAL C 122 GLY C 128 1 7 HELIX 36 36 ASP C 138 ILE C 146 1 9 HELIX 37 37 ASP C 167 HIS C 178 1 12 HELIX 38 38 ARG C 195 GLY C 200 5 6 HELIX 39 39 ASN C 228 GLY C 243 1 16 HELIX 40 40 GLY C 247 LYS C 259 1 13 HELIX 41 41 THR C 260 THR C 281 1 22 HELIX 42 42 GLN C 298 MET C 306 1 9 HELIX 43 43 GLY C 319 THR C 331 1 13 HELIX 44 44 PRO C 359 GLY C 367 1 9 HELIX 45 45 ASP C 381 VAL C 394 1 14 HELIX 46 46 SER D 16 GLY D 24 1 9 HELIX 47 47 ASN D 63 GLY D 78 1 16 HELIX 48 48 SER D 87 GLU D 97 1 11 HELIX 49 49 TYR D 112 VAL D 122 1 11 HELIX 50 50 VAL D 122 GLY D 128 1 7 HELIX 51 51 ASP D 138 ILE D 146 1 9 HELIX 52 52 ASP D 167 HIS D 178 1 12 HELIX 53 53 ARG D 195 GLY D 200 5 6 HELIX 54 54 ASN D 228 GLY D 243 1 16 HELIX 55 55 GLY D 247 THR D 281 1 35 HELIX 56 56 GLN D 298 MET D 306 1 9 HELIX 57 57 GLY D 319 THR D 331 1 13 HELIX 58 58 PRO D 359 GLY D 367 1 9 HELIX 59 59 ASP D 381 VAL D 394 1 14 SHEET 1 A 7 ARG A 81 PHE A 85 0 SHEET 2 A 7 GLY A 221 VAL A 225 -1 O VAL A 225 N ARG A 81 SHEET 3 A 7 LEU A 203 SER A 207 -1 N VAL A 204 O VAL A 224 SHEET 4 A 7 LEU A 181 ASP A 185 1 N VAL A 184 O LEU A 203 SHEET 5 A 7 THR A 150 GLU A 156 1 N ILE A 155 O ASP A 185 SHEET 6 A 7 HIS A 104 MET A 108 1 N HIS A 104 O LYS A 151 SHEET 7 A 7 ASP A 130 VAL A 134 1 O SER A 132 N ALA A 107 SHEET 1 B 5 ILE A 285 ILE A 289 0 SHEET 2 B 5 ILE A 312 LEU A 317 -1 O SER A 314 N ILE A 289 SHEET 3 B 5 LEU A 372 SER A 376 -1 O LEU A 375 N VAL A 313 SHEET 4 B 5 LEU A 346 ASN A 348 -1 N LEU A 346 O SER A 376 SHEET 5 B 5 THR A 335 LEU A 336 1 N THR A 335 O VAL A 347 SHEET 1 C 7 ARG B 81 PHE B 85 0 SHEET 2 C 7 GLY B 221 VAL B 225 -1 O GLY B 221 N PHE B 85 SHEET 3 C 7 LEU B 203 SER B 207 -1 N VAL B 204 O VAL B 224 SHEET 4 C 7 LEU B 181 ASP B 185 1 N VAL B 184 O LEU B 203 SHEET 5 C 7 THR B 150 GLU B 156 1 N ILE B 155 O ASP B 185 SHEET 6 C 7 HIS B 104 MET B 108 1 N HIS B 104 O LYS B 151 SHEET 7 C 7 ASP B 130 VAL B 134 1 O VAL B 134 N ALA B 107 SHEET 1 D 5 ILE B 285 ILE B 289 0 SHEET 2 D 5 ILE B 312 LEU B 317 -1 O SER B 314 N ILE B 289 SHEET 3 D 5 LEU B 372 SER B 376 -1 O LEU B 375 N VAL B 313 SHEET 4 D 5 LEU B 346 ASN B 348 -1 N LEU B 346 O SER B 376 SHEET 5 D 5 THR B 335 LEU B 336 1 N THR B 335 O VAL B 347 SHEET 1 E 7 ARG C 81 PHE C 85 0 SHEET 2 E 7 GLY C 221 VAL C 225 -1 O GLY C 221 N PHE C 85 SHEET 3 E 7 LEU C 203 SER C 207 -1 N VAL C 204 O VAL C 224 SHEET 4 E 7 LEU C 181 ASP C 185 1 N VAL C 184 O VAL C 205 SHEET 5 E 7 THR C 150 GLU C 156 1 N ILE C 155 O ASP C 185 SHEET 6 E 7 HIS C 104 MET C 108 1 N HIS C 104 O LYS C 151 SHEET 7 E 7 ASP C 130 VAL C 134 1 O SER C 132 N ALA C 107 SHEET 1 F 5 ILE C 285 ILE C 289 0 SHEET 2 F 5 ILE C 312 LEU C 317 -1 O SER C 314 N ILE C 289 SHEET 3 F 5 LEU C 372 SER C 376 -1 O LEU C 375 N VAL C 313 SHEET 4 F 5 LEU C 346 ASN C 348 -1 N LEU C 346 O SER C 376 SHEET 5 F 5 THR C 335 LEU C 336 1 N THR C 335 O VAL C 347 SHEET 1 G 7 ARG D 81 PHE D 85 0 SHEET 2 G 7 GLY D 221 VAL D 225 -1 O VAL D 225 N ARG D 81 SHEET 3 G 7 LEU D 203 SER D 207 -1 N VAL D 204 O VAL D 224 SHEET 4 G 7 LEU D 181 ASP D 185 1 N VAL D 184 O LEU D 203 SHEET 5 G 7 THR D 150 GLU D 156 1 N ILE D 155 O ASP D 185 SHEET 6 G 7 HIS D 104 MET D 108 1 N HIS D 104 O LYS D 151 SHEET 7 G 7 ASP D 130 VAL D 134 1 O SER D 132 N ALA D 107 SHEET 1 H 5 ILE D 285 ILE D 289 0 SHEET 2 H 5 ILE D 312 LEU D 317 -1 O SER D 314 N ILE D 289 SHEET 3 H 5 LEU D 372 SER D 376 -1 O LEU D 375 N VAL D 313 SHEET 4 H 5 LEU D 346 ASN D 348 -1 N LEU D 346 O SER D 376 SHEET 5 H 5 THR D 335 LEU D 336 1 N THR D 335 O VAL D 347 CISPEP 1 THR A 157 PRO A 158 0 -10.48 CISPEP 2 ASN A 160 PRO A 161 0 14.52 CISPEP 3 THR B 157 PRO B 158 0 -8.80 CISPEP 4 ASN B 160 PRO B 161 0 18.80 CISPEP 5 THR C 157 PRO C 158 0 -12.40 CISPEP 6 ASN C 160 PRO C 161 0 11.89 CISPEP 7 THR D 157 PRO D 158 0 -7.54 CISPEP 8 ASN D 160 PRO D 161 0 11.61 SITE 1 AC1 8 TYR A 112 ARG A 117 GLU A 338 TYR B 58 SITE 2 AC1 8 ARG B 60 THR B 61 ASN B 240 HOH B 818 SITE 1 AC2 8 ASP A 167 ILE A 168 ALA A 169 ARG A 304 SITE 2 AC2 8 GLN A 305 ALA C 294 SER C 295 HOH C 699 SITE 1 AC3 8 GLU A 280 THR A 281 HIS A 282 ILE A 285 SITE 2 AC3 8 ARG D 176 LEU D 197 SER D 198 GLY D 200 SITE 1 AC4 7 ARG A 117 ARG A 121 HOH A 630 HOH A 704 SITE 2 AC4 7 HOH A 837 PHE B 237 VAL B 300 SITE 1 AC5 15 SER A 87 GLY A 88 MET A 89 TYR A 112 SITE 2 AC5 15 ASN A 160 ASP A 185 SER A 207 THR A 209 SITE 3 AC5 15 LYS A 210 SER A 339 LEU A 340 THR A 354 SITE 4 AC5 15 ARG A 374 TYR B 58 ARG B 60 SITE 1 AC6 10 GLU A 57 TYR A 58 ARG A 60 THR A 61 SITE 2 AC6 10 ASN A 240 TYR B 112 ARG B 117 GLU B 338 SITE 3 AC6 10 KOU B 403 HOH B 777 SITE 1 AC7 7 ARG A 121 ARG A 125 GLN B 234 PHE B 237 SITE 2 AC7 7 LYS B 303 HOH B 698 HOH B 704 SITE 1 AC8 17 TYR A 58 ARG A 60 SER B 87 GLY B 88 SITE 2 AC8 17 MET B 89 TYR B 112 ASN B 160 ASP B 185 SITE 3 AC8 17 SER B 207 THR B 209 LYS B 210 GLU B 338 SITE 4 AC8 17 SER B 339 LEU B 340 THR B 354 ARG B 374 SITE 5 AC8 17 SER B 401 SITE 1 AC9 10 TYR C 112 ARG C 117 GLU C 338 KOU C 402 SITE 2 AC9 10 HOH C 681 GLU D 57 TYR D 58 ARG D 60 SITE 3 AC9 10 THR D 61 ASN D 240 SITE 1 BC1 16 SER C 87 GLY C 88 MET C 89 TYR C 112 SITE 2 BC1 16 ASN C 160 ASP C 185 SER C 207 THR C 209 SITE 3 BC1 16 LYS C 210 GLU C 338 SER C 339 THR C 354 SITE 4 BC1 16 ARG C 374 SER C 401 TYR D 58 ARG D 60 SITE 1 BC2 9 GLU C 57 TYR C 58 ARG C 60 THR C 61 SITE 2 BC2 9 ASN C 240 TYR D 112 ARG D 117 GLU D 338 SITE 3 BC2 9 KOU D 403 SITE 1 BC3 9 ASN D 271 ILE D 379 GLU D 380 ASP D 381 SITE 2 BC3 9 LEU D 382 HOH D 503 HOH D 565 HOH D 610 SITE 3 BC3 9 HOH D 845 SITE 1 BC4 15 TYR C 58 ARG C 60 SER D 87 GLY D 88 SITE 2 BC4 15 MET D 89 TYR D 112 ASN D 160 ASP D 185 SITE 3 BC4 15 SER D 207 THR D 209 LYS D 210 SER D 339 SITE 4 BC4 15 THR D 354 ARG D 374 SER D 401 CRYST1 76.219 86.069 225.997 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013120 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011619 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004425 0.00000