PDB Short entry for 4IZA HEADER TRANSFERASE 29-JAN-13 4IZA TITLE STRUCTURE OF DUALLY PHOSPHORYLATED ERK2 BOUND TO THE PEA-15 DEATH TITLE 2 EFFECTOR DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 8-360; COMPND 5 SYNONYM: MAP KINASE 1, MAPK 1, ERT1, EXTRACELLULAR SIGNAL-REGULATED COMPND 6 KINASE 2, ERK-2, MAP KINASE ISOFORM P42, P42-MAPK, MITOGEN-ACTIVATED COMPND 7 PROTEIN KINASE 2, MAP KINASE 2, MAPK 2; COMPND 8 EC: 2.7.11.24; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: ASTROCYTIC PHOSPHOPROTEIN PEA-15; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: UNP RESIDUES 1-96; COMPND 14 SYNONYM: 15 KDA PHOSPHOPROTEIN ENRICHED IN ASTROCYTES, PHOSPHOPROTEIN COMPND 15 ENRICHED IN DIABETES, PED; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK1, ERK2, PRKM1, PRKM2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: PEA15; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS MAP KINASE, DEATH EFFECTOR DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.D.MACE,H.ROBINSON,S.J.RIEDL REVDAT 2 24-APR-13 4IZA 1 JRNL REVDAT 1 10-APR-13 4IZA 0 JRNL AUTH P.D.MACE,Y.WALLEZ,M.F.EGGER,M.K.DOBACZEWSKA,H.ROBINSON, JRNL AUTH 2 E.B.PASQUALE,S.J.RIEDL JRNL TITL STRUCTURE OF ERK2 BOUND TO PEA-15 REVEALS A MECHANISM FOR JRNL TITL 2 RAPID RELEASE OF ACTIVATED MAPK. JRNL REF NAT COMMUN V. 4 1681 2013 JRNL REFN ESSN 2041-1723 JRNL PMID 23575685 JRNL DOI 10.1038/NCOMMS2687 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0107 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 66545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3515 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4726 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 255 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6230 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 633 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.163 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6430 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8735 ; 1.319 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 778 ; 5.513 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 304 ;39.069 ;24.145 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1106 ;14.025 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;21.463 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 973 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4868 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4IZA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-13. REMARK 100 THE RCSB ID CODE IS RCSB077397. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66545 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 29.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.600 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM PHOSPHATE MONOBASIC REMARK 280 AND 20% W/V POLYETHYLENE GLYCOL 3,350, PH 5.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 36.87900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 102.01200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.87900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 102.01200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 5 REMARK 465 PRO A 6 REMARK 465 GLY A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 GLY A 10 REMARK 465 ARG A 359 REMARK 465 SER A 360 REMARK 465 GLY C 5 REMARK 465 PRO C 6 REMARK 465 GLY C 7 REMARK 465 GLY C 8 REMARK 465 ALA C 9 REMARK 465 GLY C 10 REMARK 465 ASP C 177 REMARK 465 HIS C 178 REMARK 465 ASP C 179 REMARK 465 HIS C 180 REMARK 465 THR C 181 REMARK 465 GLY C 182 REMARK 465 PHE C 183 REMARK 465 LEU C 184 REMARK 465 TPO C 185 REMARK 465 GLU C 186 REMARK 465 PTR C 187 REMARK 465 VAL C 188 REMARK 465 ALA C 189 REMARK 465 ARG C 359 REMARK 465 SER C 360 REMARK 465 LEU B 95 REMARK 465 ASP B 96 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 77 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 79 NE CZ NH1 NH2 REMARK 470 LYS A 99 CD CE NZ REMARK 470 LYS A 117 CD CE NZ REMARK 470 LYS A 203 CE NZ REMARK 470 LYS A 231 CE NZ REMARK 470 GLU A 326 CG CD OE1 OE2 REMARK 470 LYS A 330 CG CD CE NZ REMARK 470 ASP A 337 CG OD1 OD2 REMARK 470 LYS C 54 CG CD CE NZ REMARK 470 GLU C 60 CG CD OE1 OE2 REMARK 470 ARG C 67 CD NE CZ NH1 NH2 REMARK 470 LYS C 73 CG CD CE NZ REMARK 470 ARG C 77 CD NE CZ NH1 NH2 REMARK 470 GLU C 96 CG CD OE1 OE2 REMARK 470 GLN C 97 CG CD OE1 NE2 REMARK 470 LYS C 99 CG CD CE NZ REMARK 470 ARG C 172 CD NE CZ NH1 NH2 REMARK 470 ASP C 175 CG OD1 OD2 REMARK 470 LYS C 203 CG CD CE NZ REMARK 470 LYS C 231 CE NZ REMARK 470 GLU C 250 CD OE1 OE2 REMARK 470 LYS C 259 CG CD CE NZ REMARK 470 LYS C 270 CD CE NZ REMARK 470 GLU C 305 CG CD OE1 OE2 REMARK 470 GLU C 326 CD OE1 OE2 REMARK 470 LYS C 330 CD CE NZ REMARK 470 ASP C 332 CG OD1 OD2 REMARK 470 ASP C 337 CG OD1 OD2 REMARK 470 LYS C 342 CD CE NZ REMARK 470 GLU C 349 CG CD OE1 OE2 REMARK 470 LYS B 28 CG CD CE NZ REMARK 470 GLU B 29 CG CD OE1 OE2 REMARK 470 LYS B 35 CG CD CE NZ REMARK 470 GLU B 37 CG CD OE1 OE2 REMARK 470 GLU B 38 CG CD OE1 OE2 REMARK 470 LYS B 88 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 177 O HOH A 457 2655 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 27 CB CYS B 27 SG -0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 251 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 251 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG C 301 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG C 301 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 36 10.49 56.77 REMARK 500 ARG A 148 -1.94 77.26 REMARK 500 ASP A 149 36.26 -143.12 REMARK 500 ASN A 158 -155.32 -98.70 REMARK 500 ASP A 167 73.87 68.35 REMARK 500 ASP A 175 82.87 -156.34 REMARK 500 ASN A 257 97.45 -56.41 REMARK 500 LEU A 294 50.80 -99.85 REMARK 500 ASP A 318 80.13 -160.83 REMARK 500 ARG C 148 -9.06 80.03 REMARK 500 ASP C 149 40.94 -140.08 REMARK 500 ASP C 167 75.04 69.86 REMARK 500 ASP C 175 43.28 -161.77 REMARK 500 SER C 223 -0.94 -145.98 REMARK 500 ASN C 257 105.51 -170.22 REMARK 500 LEU C 294 58.84 -105.21 REMARK 500 ASP C 318 82.75 -156.93 REMARK 500 ASP C 332 -3.62 -57.70 REMARK 500 ARG C 353 -8.61 -59.21 REMARK 500 GLU B 38 50.85 -100.20 REMARK 500 ARG B 72 68.62 -119.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 TYR A 36 24.4 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IZ7 RELATED DB: PDB REMARK 900 STRUCTURE OF NON-PHOSPHORYLATED ERK2 BOUND TO THE PEA-15 REMARK 900 DEATH EFFECTOR DOMAIN REMARK 900 RELATED ID: 4IZ5 RELATED DB: PDB REMARK 900 STRUCTURE OF THE COMPLEX BETWEEN ERK2 PHOSPHOMIMETIC MUTANT REMARK 900 AND PEA-15 DBREF 4IZA A 8 360 UNP P28482 MK01_HUMAN 8 360 DBREF 4IZA C 8 360 UNP P28482 MK01_HUMAN 8 360 DBREF 4IZA B 1 96 UNP Q15121 PEA15_HUMAN 1 96 SEQADV 4IZA GLY A 5 UNP P28482 EXPRESSION TAG SEQADV 4IZA PRO A 6 UNP P28482 EXPRESSION TAG SEQADV 4IZA GLY A 7 UNP P28482 EXPRESSION TAG SEQADV 4IZA GLY C 5 UNP P28482 EXPRESSION TAG SEQADV 4IZA PRO C 6 UNP P28482 EXPRESSION TAG SEQADV 4IZA GLY C 7 UNP P28482 EXPRESSION TAG SEQADV 4IZA GLY B 0 UNP Q15121 EXPRESSION TAG SEQRES 1 A 356 GLY PRO GLY GLY ALA GLY PRO GLU MET VAL ARG GLY GLN SEQRES 2 A 356 VAL PHE ASP VAL GLY PRO ARG TYR THR ASN LEU SER TYR SEQRES 3 A 356 ILE GLY GLU GLY ALA TYR GLY MET VAL CYS SER ALA TYR SEQRES 4 A 356 ASP ASN VAL ASN LYS VAL ARG VAL ALA ILE LYS LYS ILE SEQRES 5 A 356 SER PRO PHE GLU HIS GLN THR TYR CYS GLN ARG THR LEU SEQRES 6 A 356 ARG GLU ILE LYS ILE LEU LEU ARG PHE ARG HIS GLU ASN SEQRES 7 A 356 ILE ILE GLY ILE ASN ASP ILE ILE ARG ALA PRO THR ILE SEQRES 8 A 356 GLU GLN MET LYS ASP VAL TYR ILE VAL GLN ASP LEU MET SEQRES 9 A 356 GLU THR ASP LEU TYR LYS LEU LEU LYS THR GLN HIS LEU SEQRES 10 A 356 SER ASN ASP HIS ILE CYS TYR PHE LEU TYR GLN ILE LEU SEQRES 11 A 356 ARG GLY LEU LYS TYR ILE HIS SER ALA ASN VAL LEU HIS SEQRES 12 A 356 ARG ASP LEU LYS PRO SER ASN LEU LEU LEU ASN THR THR SEQRES 13 A 356 CYS ASP LEU LYS ILE CYS ASP PHE GLY LEU ALA ARG VAL SEQRES 14 A 356 ALA ASP PRO ASP HIS ASP HIS THR GLY PHE LEU TPO GLU SEQRES 15 A 356 PTR VAL ALA THR ARG TRP TYR ARG ALA PRO GLU ILE MET SEQRES 16 A 356 LEU ASN SER LYS GLY TYR THR LYS SER ILE ASP ILE TRP SEQRES 17 A 356 SER VAL GLY CYS ILE LEU ALA GLU MET LEU SER ASN ARG SEQRES 18 A 356 PRO ILE PHE PRO GLY LYS HIS TYR LEU ASP GLN LEU ASN SEQRES 19 A 356 HIS ILE LEU GLY ILE LEU GLY SER PRO SER GLN GLU ASP SEQRES 20 A 356 LEU ASN CYS ILE ILE ASN LEU LYS ALA ARG ASN TYR LEU SEQRES 21 A 356 LEU SER LEU PRO HIS LYS ASN LYS VAL PRO TRP ASN ARG SEQRES 22 A 356 LEU PHE PRO ASN ALA ASP SER LYS ALA LEU ASP LEU LEU SEQRES 23 A 356 ASP LYS MET LEU THR PHE ASN PRO HIS LYS ARG ILE GLU SEQRES 24 A 356 VAL GLU GLN ALA LEU ALA HIS PRO TYR LEU GLU GLN TYR SEQRES 25 A 356 TYR ASP PRO SER ASP GLU PRO ILE ALA GLU ALA PRO PHE SEQRES 26 A 356 LYS PHE ASP MET GLU LEU ASP ASP LEU PRO LYS GLU LYS SEQRES 27 A 356 LEU LYS GLU LEU ILE PHE GLU GLU THR ALA ARG PHE GLN SEQRES 28 A 356 PRO GLY TYR ARG SER SEQRES 1 C 356 GLY PRO GLY GLY ALA GLY PRO GLU MET VAL ARG GLY GLN SEQRES 2 C 356 VAL PHE ASP VAL GLY PRO ARG TYR THR ASN LEU SER TYR SEQRES 3 C 356 ILE GLY GLU GLY ALA TYR GLY MET VAL CYS SER ALA TYR SEQRES 4 C 356 ASP ASN VAL ASN LYS VAL ARG VAL ALA ILE LYS LYS ILE SEQRES 5 C 356 SER PRO PHE GLU HIS GLN THR TYR CYS GLN ARG THR LEU SEQRES 6 C 356 ARG GLU ILE LYS ILE LEU LEU ARG PHE ARG HIS GLU ASN SEQRES 7 C 356 ILE ILE GLY ILE ASN ASP ILE ILE ARG ALA PRO THR ILE SEQRES 8 C 356 GLU GLN MET LYS ASP VAL TYR ILE VAL GLN ASP LEU MET SEQRES 9 C 356 GLU THR ASP LEU TYR LYS LEU LEU LYS THR GLN HIS LEU SEQRES 10 C 356 SER ASN ASP HIS ILE CYS TYR PHE LEU TYR GLN ILE LEU SEQRES 11 C 356 ARG GLY LEU LYS TYR ILE HIS SER ALA ASN VAL LEU HIS SEQRES 12 C 356 ARG ASP LEU LYS PRO SER ASN LEU LEU LEU ASN THR THR SEQRES 13 C 356 CYS ASP LEU LYS ILE CYS ASP PHE GLY LEU ALA ARG VAL SEQRES 14 C 356 ALA ASP PRO ASP HIS ASP HIS THR GLY PHE LEU TPO GLU SEQRES 15 C 356 PTR VAL ALA THR ARG TRP TYR ARG ALA PRO GLU ILE MET SEQRES 16 C 356 LEU ASN SER LYS GLY TYR THR LYS SER ILE ASP ILE TRP SEQRES 17 C 356 SER VAL GLY CYS ILE LEU ALA GLU MET LEU SER ASN ARG SEQRES 18 C 356 PRO ILE PHE PRO GLY LYS HIS TYR LEU ASP GLN LEU ASN SEQRES 19 C 356 HIS ILE LEU GLY ILE LEU GLY SER PRO SER GLN GLU ASP SEQRES 20 C 356 LEU ASN CYS ILE ILE ASN LEU LYS ALA ARG ASN TYR LEU SEQRES 21 C 356 LEU SER LEU PRO HIS LYS ASN LYS VAL PRO TRP ASN ARG SEQRES 22 C 356 LEU PHE PRO ASN ALA ASP SER LYS ALA LEU ASP LEU LEU SEQRES 23 C 356 ASP LYS MET LEU THR PHE ASN PRO HIS LYS ARG ILE GLU SEQRES 24 C 356 VAL GLU GLN ALA LEU ALA HIS PRO TYR LEU GLU GLN TYR SEQRES 25 C 356 TYR ASP PRO SER ASP GLU PRO ILE ALA GLU ALA PRO PHE SEQRES 26 C 356 LYS PHE ASP MET GLU LEU ASP ASP LEU PRO LYS GLU LYS SEQRES 27 C 356 LEU LYS GLU LEU ILE PHE GLU GLU THR ALA ARG PHE GLN SEQRES 28 C 356 PRO GLY TYR ARG SER SEQRES 1 B 97 GLY MET ALA GLU TYR GLY THR LEU LEU GLN ASP LEU THR SEQRES 2 B 97 ASN ASN ILE THR LEU GLU ASP LEU GLU GLN LEU LYS SER SEQRES 3 B 97 ALA CYS LYS GLU ASP ILE PRO SER GLU LYS SER GLU GLU SEQRES 4 B 97 ILE THR THR GLY SER ALA TRP PHE SER PHE LEU GLU SER SEQRES 5 B 97 HIS ASN LYS LEU ASP LYS ASP ASN LEU SER TYR ILE GLU SEQRES 6 B 97 HIS ILE PHE GLU ILE SER ARG ARG PRO ASP LEU LEU THR SEQRES 7 B 97 MET VAL VAL ASP TYR ARG THR ARG VAL LEU LYS ILE SER SEQRES 8 B 97 GLU GLU ASP GLU LEU ASP MODRES 4IZA TPO A 185 THR PHOSPHOTHREONINE MODRES 4IZA PTR A 187 TYR O-PHOSPHOTYROSINE HET TPO A 185 11 HET PTR A 187 16 HETNAM TPO PHOSPHOTHREONINE HETNAM PTR O-PHOSPHOTYROSINE HETSYN TPO PHOSPHONOTHREONINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 1 PTR C9 H12 N O6 P FORMUL 4 HOH *633(H2 O) HELIX 1 1 HIS A 61 PHE A 78 1 18 HELIX 2 2 LEU A 112 GLN A 119 1 8 HELIX 3 3 SER A 122 ALA A 143 1 22 HELIX 4 4 LYS A 151 SER A 153 5 3 HELIX 5 5 THR A 190 ARG A 194 5 5 HELIX 6 6 ALA A 195 ASN A 201 1 7 HELIX 7 7 LYS A 207 ASN A 224 1 18 HELIX 8 8 HIS A 232 GLY A 245 1 14 HELIX 9 9 SER A 248 ASN A 253 1 6 HELIX 10 10 ASN A 257 LEU A 267 1 11 HELIX 11 11 PRO A 274 PHE A 279 1 6 HELIX 12 12 ASP A 283 LEU A 294 1 12 HELIX 13 13 GLU A 303 ALA A 309 1 7 HELIX 14 14 HIS A 310 GLU A 314 5 5 HELIX 15 15 ASP A 318 GLU A 322 5 5 HELIX 16 16 PRO A 339 ALA A 352 1 14 HELIX 17 17 ARG A 353 GLN A 355 5 3 HELIX 18 18 HIS C 61 PHE C 78 1 18 HELIX 19 19 LEU C 112 GLN C 119 1 8 HELIX 20 20 SER C 122 ALA C 143 1 22 HELIX 21 21 LYS C 151 SER C 153 5 3 HELIX 22 22 ALA C 195 LEU C 200 1 6 HELIX 23 23 LYS C 207 LEU C 222 1 16 HELIX 24 24 HIS C 232 GLY C 245 1 14 HELIX 25 25 SER C 248 CYS C 254 1 7 HELIX 26 26 ASN C 257 SER C 266 1 10 HELIX 27 27 PRO C 274 PHE C 279 1 6 HELIX 28 28 ASP C 283 LEU C 294 1 12 HELIX 29 29 ASN C 297 ARG C 301 5 5 HELIX 30 30 GLU C 303 ALA C 309 1 7 HELIX 31 31 HIS C 310 GLU C 314 5 5 HELIX 32 32 ASP C 318 GLU C 322 5 5 HELIX 33 33 GLU C 334 LEU C 338 5 5 HELIX 34 34 PRO C 339 THR C 351 1 13 HELIX 35 35 ALA C 352 GLN C 355 5 4 HELIX 36 36 MET B 1 ASN B 14 1 14 HELIX 37 37 THR B 16 LYS B 28 1 13 HELIX 38 38 ILE B 31 LYS B 35 5 5 HELIX 39 39 THR B 41 HIS B 52 1 12 HELIX 40 40 LEU B 60 SER B 70 1 11 HELIX 41 41 ARG B 72 GLU B 91 1 20 SHEET 1 A 2 MET A 13 VAL A 14 0 SHEET 2 A 2 GLN A 17 VAL A 18 -1 O GLN A 17 N VAL A 14 SHEET 1 B 5 TYR A 25 GLY A 34 0 SHEET 2 B 5 GLY A 37 ASP A 44 -1 O TYR A 43 N THR A 26 SHEET 3 B 5 VAL A 49 ILE A 56 -1 O LYS A 55 N MET A 38 SHEET 4 B 5 VAL A 101 ASP A 106 -1 O VAL A 101 N ILE A 56 SHEET 5 B 5 ASP A 88 ILE A 90 -1 N ILE A 90 O TYR A 102 SHEET 1 C 3 THR A 110 ASP A 111 0 SHEET 2 C 3 LEU A 155 LEU A 157 -1 O LEU A 157 N THR A 110 SHEET 3 C 3 LEU A 163 ILE A 165 -1 O LYS A 164 N LEU A 156 SHEET 1 D 2 VAL A 145 LEU A 146 0 SHEET 2 D 2 ARG A 172 VAL A 173 -1 O ARG A 172 N LEU A 146 SHEET 1 E 2 MET C 13 VAL C 14 0 SHEET 2 E 2 GLN C 17 VAL C 18 -1 O GLN C 17 N VAL C 14 SHEET 1 F 5 TYR C 25 GLU C 33 0 SHEET 2 F 5 MET C 38 ASP C 44 -1 O TYR C 43 N THR C 26 SHEET 3 F 5 VAL C 49 ILE C 56 -1 O VAL C 49 N ASP C 44 SHEET 4 F 5 VAL C 101 ASP C 106 -1 O VAL C 101 N ILE C 56 SHEET 5 F 5 ASP C 88 ILE C 90 -1 N ILE C 90 O TYR C 102 SHEET 1 G 3 THR C 110 ASP C 111 0 SHEET 2 G 3 LEU C 155 LEU C 157 -1 O LEU C 157 N THR C 110 SHEET 3 G 3 LEU C 163 ILE C 165 -1 O LYS C 164 N LEU C 156 SHEET 1 H 2 VAL C 145 LEU C 146 0 SHEET 2 H 2 ARG C 172 VAL C 173 -1 O ARG C 172 N LEU C 146 LINK C LEU A 184 N TPO A 185 1555 1555 1.33 LINK C TPO A 185 N GLU A 186 1555 1555 1.34 LINK C GLU A 186 N PTR A 187 1555 1555 1.33 LINK C PTR A 187 N VAL A 188 1555 1555 1.34 CISPEP 1 GLY A 22 PRO A 23 0 2.72 CRYST1 73.758 204.024 61.135 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013558 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016357 0.00000