PDB Short entry for 4JKE HEADER RNA BINDING PROTEIN 09-MAR-13 4JKE TITLE OPEN AND CLOSED FORMS OF T1789P HUMAN PRP8 RNASE H-LIKE DOMAIN WITH TITLE 2 BOUND MG ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRE-MRNA-PROCESSING-SPLICING FACTOR 8; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PRP8 RNASE H-LIKE DOMAIN, UNP RESIDUES 1769-1990'; COMPND 5 SYNONYM: 220 KDA U5 SNRNP-SPECIFIC PROTEIN, PRP8 HOMOLOG, SPLICING COMPND 6 FACTOR PRP8, P220; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 GENE: PRP8, PRPC8, PRPF8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) ROSETTA2; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMALC2-E KEYWDS METALLOPROTEIN, CONFORMATIONAL CHANGE, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.SCHELLENBERG,T.WU,D.B.RITCHIE,K.A.ATTA,A.M.MACMILLAN REVDAT 4 20-SEP-23 4JKE 1 REMARK SEQADV LINK REVDAT 3 26-JUN-13 4JKE 1 JRNL REVDAT 2 19-JUN-13 4JKE 1 JRNL REVDAT 1 22-MAY-13 4JKE 0 JRNL AUTH M.J.SCHELLENBERG,T.WU,D.B.RITCHIE,S.FICA,J.P.STALEY, JRNL AUTH 2 K.A.ATTA,P.LAPOINTE,A.M.MACMILLAN JRNL TITL A CONFORMATIONAL SWITCH IN PRP8 MEDIATES METAL ION JRNL TITL 2 COORDINATION THAT PROMOTES PRE-MRNA EXON LIGATION. JRNL REF NAT.STRUCT.MOL.BIOL. V. 20 728 2013 JRNL REFN ISSN 1545-9993 JRNL PMID 23686287 JRNL DOI 10.1038/NSMB.2556 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 63210 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3095 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4264 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.1900 REMARK 3 BIN FREE R VALUE SET COUNT : 224 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3509 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 453 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.089 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.662 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3629 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3706 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4943 ; 1.291 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8462 ; 0.727 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 437 ; 5.627 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 153 ;41.867 ;24.575 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 669 ;13.442 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;16.792 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 585 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3940 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 794 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7335 ; 2.617 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 138 ;25.239 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7567 ;10.484 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4JKE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078156. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1158 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63481 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.60700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC 5.6.0117 REMARK 200 STARTING MODEL: PDB ENTRY 3ENB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 4000, 300MM MGCL2, 100MM TRIS, REMARK 280 PH 7.5, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.09050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.52100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.53850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.52100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.09050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.53850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1769 REMARK 465 GLU A 1770 REMARK 465 ASN A 1774 REMARK 465 GLY B 1769 REMARK 465 HIS B 1791 REMARK 465 LYS B 1792 REMARK 465 THR B 1793 REMARK 465 PHE B 1794 REMARK 465 GLU B 1795 REMARK 465 GLY B 1796 REMARK 465 ASN B 1797 REMARK 465 LEU B 1798 REMARK 465 ASP B 1990 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 1930 O HOH A 2267 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A1772 -5.34 71.88 REMARK 500 ALA A1828 110.63 -35.63 REMARK 500 ARG A1832 55.33 39.23 REMARK 500 ASP A1921 -127.35 46.58 REMARK 500 ASN A1946 87.21 -152.75 REMARK 500 SER B1773 -167.21 -115.12 REMARK 500 ASN B1804 24.86 -140.96 REMARK 500 ASP B1921 -126.43 44.08 REMARK 500 ASN B1946 80.89 -156.60 REMARK 500 LYS B1955 76.77 -118.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B2001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B1781 OD1 REMARK 620 2 HOH B2156 O 99.5 REMARK 620 3 HOH B2270 O 81.1 169.7 REMARK 620 4 HOH B2271 O 90.3 90.8 78.9 REMARK 620 5 HOH B2273 O 171.1 89.4 90.4 90.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 2001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ENB RELATED DB: PDB REMARK 900 RELATED ID: 4JK7 RELATED DB: PDB REMARK 900 RELATED ID: 4JK8 RELATED DB: PDB REMARK 900 RELATED ID: 4JK9 RELATED DB: PDB REMARK 900 RELATED ID: 4JKA RELATED DB: PDB REMARK 900 RELATED ID: 4JKB RELATED DB: PDB REMARK 900 RELATED ID: 4JKC RELATED DB: PDB REMARK 900 RELATED ID: 4JKD RELATED DB: PDB REMARK 900 RELATED ID: 4JKF RELATED DB: PDB REMARK 900 RELATED ID: 4JKG RELATED DB: PDB REMARK 900 RELATED ID: 4JKH RELATED DB: PDB DBREF 4JKE A 1769 1990 UNP Q6P2Q9 PRP8_HUMAN 1769 1990 DBREF 4JKE B 1769 1990 UNP Q6P2Q9 PRP8_HUMAN 1769 1990 SEQADV 4JKE PRO A 1789 UNP Q6P2Q9 THR 1789 ENGINEERED MUTATION SEQADV 4JKE PRO B 1789 UNP Q6P2Q9 THR 1789 ENGINEERED MUTATION SEQRES 1 A 222 GLY GLU LEU PHE SER ASN GLN ILE ILE TRP PHE VAL ASP SEQRES 2 A 222 ASP THR ASN VAL TYR ARG VAL PRO ILE HIS LYS THR PHE SEQRES 3 A 222 GLU GLY ASN LEU THR THR LYS PRO ILE ASN GLY ALA ILE SEQRES 4 A 222 PHE ILE PHE ASN PRO ARG THR GLY GLN LEU PHE LEU LYS SEQRES 5 A 222 ILE ILE HIS THR SER VAL TRP ALA GLY GLN LYS ARG LEU SEQRES 6 A 222 GLY GLN LEU ALA LYS TRP LYS THR ALA GLU GLU VAL ALA SEQRES 7 A 222 ALA LEU ILE ARG SER LEU PRO VAL GLU GLU GLN PRO LYS SEQRES 8 A 222 GLN ILE ILE VAL THR ARG LYS GLY MET LEU ASP PRO LEU SEQRES 9 A 222 GLU VAL HIS LEU LEU ASP PHE PRO ASN ILE VAL ILE LYS SEQRES 10 A 222 GLY SER GLU LEU GLN LEU PRO PHE GLN ALA CYS LEU LYS SEQRES 11 A 222 VAL GLU LYS PHE GLY ASP LEU ILE LEU LYS ALA THR GLU SEQRES 12 A 222 PRO GLN MET VAL LEU PHE ASN LEU TYR ASP ASP TRP LEU SEQRES 13 A 222 LYS THR ILE SER SER TYR THR ALA PHE SER ARG LEU ILE SEQRES 14 A 222 LEU ILE LEU ARG ALA LEU HIS VAL ASN ASN ASP ARG ALA SEQRES 15 A 222 LYS VAL ILE LEU LYS PRO ASP LYS THR THR ILE THR GLU SEQRES 16 A 222 PRO HIS HIS ILE TRP PRO THR LEU THR ASP GLU GLU TRP SEQRES 17 A 222 ILE LYS VAL GLU VAL GLN LEU LYS ASP LEU ILE LEU ALA SEQRES 18 A 222 ASP SEQRES 1 B 222 GLY GLU LEU PHE SER ASN GLN ILE ILE TRP PHE VAL ASP SEQRES 2 B 222 ASP THR ASN VAL TYR ARG VAL PRO ILE HIS LYS THR PHE SEQRES 3 B 222 GLU GLY ASN LEU THR THR LYS PRO ILE ASN GLY ALA ILE SEQRES 4 B 222 PHE ILE PHE ASN PRO ARG THR GLY GLN LEU PHE LEU LYS SEQRES 5 B 222 ILE ILE HIS THR SER VAL TRP ALA GLY GLN LYS ARG LEU SEQRES 6 B 222 GLY GLN LEU ALA LYS TRP LYS THR ALA GLU GLU VAL ALA SEQRES 7 B 222 ALA LEU ILE ARG SER LEU PRO VAL GLU GLU GLN PRO LYS SEQRES 8 B 222 GLN ILE ILE VAL THR ARG LYS GLY MET LEU ASP PRO LEU SEQRES 9 B 222 GLU VAL HIS LEU LEU ASP PHE PRO ASN ILE VAL ILE LYS SEQRES 10 B 222 GLY SER GLU LEU GLN LEU PRO PHE GLN ALA CYS LEU LYS SEQRES 11 B 222 VAL GLU LYS PHE GLY ASP LEU ILE LEU LYS ALA THR GLU SEQRES 12 B 222 PRO GLN MET VAL LEU PHE ASN LEU TYR ASP ASP TRP LEU SEQRES 13 B 222 LYS THR ILE SER SER TYR THR ALA PHE SER ARG LEU ILE SEQRES 14 B 222 LEU ILE LEU ARG ALA LEU HIS VAL ASN ASN ASP ARG ALA SEQRES 15 B 222 LYS VAL ILE LEU LYS PRO ASP LYS THR THR ILE THR GLU SEQRES 16 B 222 PRO HIS HIS ILE TRP PRO THR LEU THR ASP GLU GLU TRP SEQRES 17 B 222 ILE LYS VAL GLU VAL GLN LEU LYS ASP LEU ILE LEU ALA SEQRES 18 B 222 ASP HET MG B2001 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG MG 2+ FORMUL 4 HOH *453(H2 O) HELIX 1 1 HIS A 1823 ALA A 1828 5 6 HELIX 2 2 ARG A 1832 LEU A 1852 1 21 HELIX 3 3 PRO A 1853 GLN A 1857 5 5 HELIX 4 4 ARG A 1865 GLY A 1867 5 3 HELIX 5 5 MET A 1868 LEU A 1876 1 9 HELIX 6 6 PRO A 1892 LYS A 1898 5 7 HELIX 7 7 VAL A 1899 ALA A 1909 1 11 HELIX 8 8 ASP A 1922 THR A 1926 5 5 HELIX 9 9 SER A 1928 ASN A 1946 1 19 HELIX 10 10 ASN A 1946 LEU A 1954 1 9 HELIX 11 11 THR A 1972 ASP A 1990 1 19 HELIX 12 12 VAL B 1826 GLN B 1830 5 5 HELIX 13 13 ALA B 1837 LEU B 1852 1 16 HELIX 14 14 PRO B 1853 GLN B 1857 5 5 HELIX 15 15 ARG B 1865 GLY B 1867 5 3 HELIX 16 16 MET B 1868 LEU B 1876 1 9 HELIX 17 17 PRO B 1892 LYS B 1898 5 7 HELIX 18 18 VAL B 1899 ALA B 1909 1 11 HELIX 19 19 ASP B 1922 THR B 1926 5 5 HELIX 20 20 SER B 1928 ASN B 1946 1 19 HELIX 21 21 ASN B 1946 LEU B 1954 1 9 HELIX 22 22 THR B 1972 ALA B 1989 1 18 SHEET 1 A 6 VAL A1883 LYS A1885 0 SHEET 2 A 6 GLN A1860 VAL A1863 1 N ILE A1861 O VAL A1883 SHEET 3 A 6 ILE A1777 ASP A1781 1 N TRP A1778 O ILE A1862 SHEET 4 A 6 GLY A1805 PHE A1810 -1 O PHE A1810 N PHE A1779 SHEET 5 A 6 GLN A1816 ILE A1822 -1 O PHE A1818 N ILE A1809 SHEET 6 A 6 GLN A1913 ASN A1918 -1 O GLN A1913 N ILE A1821 SHEET 1 B 6 VAL B1883 GLY B1886 0 SHEET 2 B 6 GLN B1860 VAL B1863 1 N ILE B1861 O LYS B1885 SHEET 3 B 6 ILE B1777 ASN B1784 1 N TRP B1778 O ILE B1862 SHEET 4 B 6 GLY B1805 PHE B1810 -1 O PHE B1810 N PHE B1779 SHEET 5 B 6 GLN B1816 ILE B1822 -1 O PHE B1818 N ILE B1809 SHEET 6 B 6 GLN B1913 ASN B1918 -1 O VAL B1915 N LEU B1819 LINK OD1 ASP B1781 MG MG B2001 1555 1555 2.17 LINK MG MG B2001 O HOH B2156 1555 1555 2.20 LINK MG MG B2001 O HOH B2270 1555 1555 1.90 LINK MG MG B2001 O HOH B2271 1555 1555 2.90 LINK MG MG B2001 O HOH B2273 1555 1555 1.84 SITE 1 AC1 5 ASP B1781 HOH B2156 HOH B2270 HOH B2271 SITE 2 AC1 5 HOH B2273 CRYST1 76.181 77.077 93.042 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013127 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012974 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010748 0.00000