PDB Short entry for 4LAH HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 19-JUN-13 4LAH TITLE STRUCTURE-BASED DESIGN OF NEW DIHYDROFOLATE REDUCTASE ANTIBACTERIAL TITLE 2 AGENTS: 7-(BENZIMIDAZOL-1-YL)-2,4-DIAMINOQUINAZOLINES COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: X; COMPND 4 SYNONYM: DHFR; COMPND 5 EC: 1.5.1.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: FOLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-AI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS DHFR, PROTEIN-INHIBITOR COMPLEX, FOLATE, NADPH, OXIDOREDUCTASE- KEYWDS 2 OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.T.HILGERS REVDAT 4 28-FEB-24 4LAH 1 REMARK SEQADV REVDAT 3 15-NOV-17 4LAH 1 REMARK REVDAT 2 26-FEB-14 4LAH 1 JRNL REVDAT 1 19-FEB-14 4LAH 0 JRNL AUTH T.LAM,M.T.HILGERS,M.L.CUNNINGHAM,B.P.KWAN,K.J.NELSON, JRNL AUTH 2 V.BROWN-DRIVER,V.ONG,M.TRZOSS,G.HOUGH,K.J.SHAW,J.FINN JRNL TITL STRUCTURE-BASED DESIGN OF NEW DIHYDROFOLATE REDUCTASE JRNL TITL 2 ANTIBACTERIAL AGENTS: JRNL TITL 3 7-(BENZIMIDAZOL-1-YL)-2,4-DIAMINOQUINAZOLINES. JRNL REF J.MED.CHEM. V. 57 651 2014 JRNL REFN ISSN 0022-2623 JRNL PMID 24428639 JRNL DOI 10.1021/JM401204G REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 15303 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 814 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 696 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.5040 REMARK 3 BIN FREE R VALUE SET COUNT : 42 REMARK 3 BIN FREE R VALUE : 0.4830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1272 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 65 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : 0.18000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.147 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.115 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.462 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1390 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1900 ; 1.593 ; 2.021 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 156 ; 5.799 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;34.374 ;24.194 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 226 ;12.987 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 9.725 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 207 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1041 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 605 ; 0.172 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 926 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 92 ; 0.112 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 33 ; 0.216 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.432 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 806 ; 0.354 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1282 ; 0.582 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 703 ; 0.991 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 618 ; 1.479 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 2 X 20 REMARK 3 ORIGIN FOR THE GROUP (A): -1.326 24.538 -8.644 REMARK 3 T TENSOR REMARK 3 T11: -0.0397 T22: -0.1545 REMARK 3 T33: -0.1186 T12: -0.0166 REMARK 3 T13: 0.1189 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 2.1014 L22: 1.9768 REMARK 3 L33: 4.3473 L12: 1.0277 REMARK 3 L13: 0.6765 L23: -1.5163 REMARK 3 S TENSOR REMARK 3 S11: 0.0342 S12: -0.0303 S13: -0.0691 REMARK 3 S21: 0.1699 S22: 0.0323 S23: 0.0283 REMARK 3 S31: -0.4771 S32: -0.1364 S33: -0.0665 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 21 X 57 REMARK 3 ORIGIN FOR THE GROUP (A): -5.729 33.846 -3.114 REMARK 3 T TENSOR REMARK 3 T11: 0.1764 T22: -0.1257 REMARK 3 T33: -0.0021 T12: 0.0210 REMARK 3 T13: 0.2053 T23: -0.0520 REMARK 3 L TENSOR REMARK 3 L11: 1.5032 L22: 2.6152 REMARK 3 L33: 2.7585 L12: 1.6913 REMARK 3 L13: 0.7481 L23: -0.4620 REMARK 3 S TENSOR REMARK 3 S11: 0.1880 S12: -0.0862 S13: 0.3175 REMARK 3 S21: 0.2895 S22: -0.0852 S23: 0.4182 REMARK 3 S31: -0.7805 S32: -0.1417 S33: -0.1028 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 58 X 85 REMARK 3 ORIGIN FOR THE GROUP (A): 7.639 37.495 4.462 REMARK 3 T TENSOR REMARK 3 T11: 0.3278 T22: -0.0926 REMARK 3 T33: -0.1088 T12: -0.2124 REMARK 3 T13: 0.0601 T23: -0.0682 REMARK 3 L TENSOR REMARK 3 L11: 4.9533 L22: 5.8366 REMARK 3 L33: 3.7774 L12: 3.2838 REMARK 3 L13: -1.0551 L23: -2.9243 REMARK 3 S TENSOR REMARK 3 S11: 0.5793 S12: -0.4721 S13: 0.1371 REMARK 3 S21: 1.1480 S22: -0.5379 S23: -0.1941 REMARK 3 S31: -0.3943 S32: 0.2745 S33: -0.0414 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 86 X 123 REMARK 3 ORIGIN FOR THE GROUP (A): 0.235 23.901 -3.081 REMARK 3 T TENSOR REMARK 3 T11: 0.0037 T22: -0.1439 REMARK 3 T33: -0.1047 T12: -0.0499 REMARK 3 T13: 0.0913 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.7022 L22: 1.6644 REMARK 3 L33: 2.4155 L12: 0.9352 REMARK 3 L13: -0.2382 L23: -0.0794 REMARK 3 S TENSOR REMARK 3 S11: 0.1942 S12: -0.1478 S13: -0.0778 REMARK 3 S21: 0.1937 S22: -0.0656 S23: -0.1805 REMARK 3 S31: -0.4578 S32: 0.0568 S33: -0.1286 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 124 X 130 REMARK 3 ORIGIN FOR THE GROUP (A): 0.851 13.132 -4.179 REMARK 3 T TENSOR REMARK 3 T11: 0.0420 T22: -0.1343 REMARK 3 T33: -0.0190 T12: -0.0204 REMARK 3 T13: 0.0904 T23: 0.0349 REMARK 3 L TENSOR REMARK 3 L11: 7.6644 L22: 13.2992 REMARK 3 L33: 9.9219 L12: -0.9385 REMARK 3 L13: -5.3291 L23: -5.6991 REMARK 3 S TENSOR REMARK 3 S11: -0.4670 S12: -0.2664 S13: -0.9683 REMARK 3 S21: 0.0275 S22: 0.0572 S23: -0.4331 REMARK 3 S31: 0.8326 S32: 0.0295 S33: 0.4098 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 131 X 158 REMARK 3 ORIGIN FOR THE GROUP (A): -11.811 18.557 -3.728 REMARK 3 T TENSOR REMARK 3 T11: -0.0732 T22: -0.1559 REMARK 3 T33: -0.1396 T12: 0.0196 REMARK 3 T13: 0.0861 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 5.1550 L22: 2.6063 REMARK 3 L33: 8.6177 L12: -0.3697 REMARK 3 L13: 3.0875 L23: -2.5623 REMARK 3 S TENSOR REMARK 3 S11: 0.0465 S12: -0.0216 S13: 0.1239 REMARK 3 S21: 0.0309 S22: 0.0117 S23: 0.0428 REMARK 3 S31: -0.2534 S32: -0.3305 S33: -0.0582 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 201 X 202 REMARK 3 ORIGIN FOR THE GROUP (A): 6.826 31.520 -6.093 REMARK 3 T TENSOR REMARK 3 T11: 0.1142 T22: -0.0846 REMARK 3 T33: -0.0279 T12: -0.1232 REMARK 3 T13: 0.1497 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 1.4847 L22: 2.8670 REMARK 3 L33: 2.2541 L12: -0.4730 REMARK 3 L13: 1.6209 L23: -0.1733 REMARK 3 S TENSOR REMARK 3 S11: 0.0771 S12: 0.1272 S13: 0.0165 REMARK 3 S21: 0.1460 S22: -0.1279 S23: -0.1184 REMARK 3 S31: -0.3397 S32: 0.3240 S33: 0.0507 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LAH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000080385. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15303 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, SODIUM ACETATE, PH 7.2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.78033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.56067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.67050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.45083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 17.89017 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.78033 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 71.56067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 89.45083 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 53.67050 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 17.89017 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 1 REMARK 465 LYS X 159 REMARK 465 LEU X 160 REMARK 465 GLU X 161 REMARK 465 HIS X 162 REMARK 465 HIS X 163 REMARK 465 HIS X 164 REMARK 465 HIS X 165 REMARK 465 HIS X 166 REMARK 465 HIS X 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS X 39 -162.61 -120.92 REMARK 500 ASN X 70 88.78 -154.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1VO X 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP X 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LAG RELATED DB: PDB REMARK 900 RELATED ID: 4LAE RELATED DB: PDB DBREF 4LAH X 1 159 UNP P0A017 DYR_STAAU 1 159 SEQADV 4LAH LEU X 160 UNP P0A017 EXPRESSION TAG SEQADV 4LAH GLU X 161 UNP P0A017 EXPRESSION TAG SEQADV 4LAH HIS X 162 UNP P0A017 EXPRESSION TAG SEQADV 4LAH HIS X 163 UNP P0A017 EXPRESSION TAG SEQADV 4LAH HIS X 164 UNP P0A017 EXPRESSION TAG SEQADV 4LAH HIS X 165 UNP P0A017 EXPRESSION TAG SEQADV 4LAH HIS X 166 UNP P0A017 EXPRESSION TAG SEQADV 4LAH HIS X 167 UNP P0A017 EXPRESSION TAG SEQRES 1 X 167 MET THR LEU SER ILE LEU VAL ALA HIS ASP LEU GLN ARG SEQRES 2 X 167 VAL ILE GLY PHE GLU ASN GLN LEU PRO TRP HIS LEU PRO SEQRES 3 X 167 ASN ASP LEU LYS HIS VAL LYS LYS LEU SER THR GLY HIS SEQRES 4 X 167 THR LEU VAL MET GLY ARG LYS THR PHE GLU SER ILE GLY SEQRES 5 X 167 LYS PRO LEU PRO ASN ARG ARG ASN VAL VAL LEU THR SER SEQRES 6 X 167 ASP THR SER PHE ASN VAL GLU GLY VAL ASP VAL ILE HIS SEQRES 7 X 167 SER ILE GLU ASP ILE TYR GLN LEU PRO GLY HIS VAL PHE SEQRES 8 X 167 ILE PHE GLY GLY GLN THR LEU PHE GLU GLU MET ILE ASP SEQRES 9 X 167 LYS VAL ASP ASP MET TYR ILE THR VAL ILE GLU GLY LYS SEQRES 10 X 167 PHE ARG GLY ASP THR PHE PHE PRO PRO TYR THR PHE GLU SEQRES 11 X 167 ASP TRP GLU VAL ALA SER SER VAL GLU GLY LYS LEU ASP SEQRES 12 X 167 GLU LYS ASN THR ILE PRO HIS THR PHE LEU HIS LEU ILE SEQRES 13 X 167 ARG LYS LYS LEU GLU HIS HIS HIS HIS HIS HIS HET 1VO X 201 28 HET NAP X 202 48 HETNAM 1VO 7-[5,6-DIMETHYL-2-(1,3-THIAZOL-4-YL)-1H-BENZIMIDAZOL-1- HETNAM 2 1VO YL]QUINAZOLINE-2,4-DIAMINE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 1VO C20 H17 N7 S FORMUL 3 NAP C21 H28 N7 O17 P3 FORMUL 4 HOH *65(H2 O) HELIX 1 1 LEU X 25 THR X 37 1 13 HELIX 2 2 ARG X 45 GLY X 52 1 8 HELIX 3 3 ILE X 80 LEU X 86 5 7 HELIX 4 4 GLY X 95 ILE X 103 1 9 SHEET 1 A 8 ASP X 75 ILE X 77 0 SHEET 2 A 8 ARG X 59 LEU X 63 1 N ASN X 60 O ASP X 75 SHEET 3 A 8 THR X 40 GLY X 44 1 N LEU X 41 O VAL X 61 SHEET 4 A 8 VAL X 90 GLY X 94 1 O PHE X 93 N VAL X 42 SHEET 5 A 8 LEU X 3 ASP X 10 1 N SER X 4 O ILE X 92 SHEET 6 A 8 ASP X 108 ILE X 114 1 O TYR X 110 N ILE X 5 SHEET 7 A 8 HIS X 150 ARG X 157 -1 O LEU X 153 N ILE X 111 SHEET 8 A 8 TRP X 132 GLU X 139 -1 N VAL X 138 O PHE X 152 SHEET 1 B 2 VAL X 14 GLY X 16 0 SHEET 2 B 2 THR X 122 PHE X 123 -1 O THR X 122 N ILE X 15 CISPEP 1 GLY X 94 GLY X 95 0 0.02 SITE 1 AC1 12 LEU X 6 VAL X 7 ALA X 8 LEU X 21 SITE 2 AC1 12 ASP X 28 LEU X 29 VAL X 32 SER X 50 SITE 3 AC1 12 PHE X 93 NAP X 202 HOH X 315 HOH X 356 SITE 1 AC2 28 VAL X 7 ALA X 8 ILE X 15 GLY X 16 SITE 2 AC2 28 ASN X 19 GLN X 20 LEU X 21 GLY X 44 SITE 3 AC2 28 ARG X 45 LYS X 46 THR X 47 LEU X 63 SITE 4 AC2 28 THR X 64 SER X 65 HIS X 78 ILE X 80 SITE 5 AC2 28 PHE X 93 GLY X 95 GLN X 96 THR X 97 SITE 6 AC2 28 LEU X 98 GLU X 101 THR X 122 1VO X 201 SITE 7 AC2 28 HOH X 303 HOH X 319 HOH X 357 HOH X 358 CRYST1 79.183 79.183 107.341 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012629 0.007291 0.000000 0.00000 SCALE2 0.000000 0.014583 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009316 0.00000