PDB Short entry for 4M1T HEADER SIGNALING PROTEIN/INHIBITOR 04-AUG-13 4M1T TITLE CRYSTAL STRUCTURE OF SMALL MOLECULE VINYLSULFONAMIDE 14 COVALENTLY TITLE 2 BOUND TO K-RAS G12C COMPND MOL_ID: 1; COMPND 2 MOLECULE: K-RAS GTPASE; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 1-169; COMPND 5 SYNONYM: K-RAS 2, KI-RAS, C-K-RAS, C-KI-RAS, GTPASE KRAS, N- COMPND 6 TERMINALLY PROCESSED; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS ISOFORM 2B, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PJEXPRESS411 KEYWDS GTPASE, GDP BOUND, SMALL MOLECULE INHIBITOR, COVALENT BINDER, KEYWDS 2 SIGNALING PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.M.OSTREM,U.PETERS,M.L.SOS,J.A.WELLS,K.M.SHOKAT REVDAT 4 20-SEP-23 4M1T 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4M1T 1 REMARK REVDAT 2 18-DEC-13 4M1T 1 JRNL REVDAT 1 27-NOV-13 4M1T 0 JRNL AUTH J.M.OSTREM,U.PETERS,M.L.SOS,J.A.WELLS,K.M.SHOKAT JRNL TITL K-RAS(G12C) INHIBITORS ALLOSTERICALLY CONTROL GTP AFFINITY JRNL TITL 2 AND EFFECTOR INTERACTIONS. JRNL REF NATURE V. 503 548 2013 JRNL REFN ISSN 0028-0836 JRNL PMID 24256730 JRNL DOI 10.1038/NATURE12796 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1402 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 48940 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.7913 - 4.0986 1.00 3414 149 0.1539 0.1794 REMARK 3 2 4.0986 - 3.2555 1.00 3397 145 0.1518 0.1756 REMARK 3 3 3.2555 - 2.8447 1.00 3352 138 0.1770 0.2212 REMARK 3 4 2.8447 - 2.5849 1.00 3386 149 0.1907 0.2155 REMARK 3 5 2.5849 - 2.3998 1.00 3364 145 0.1743 0.1971 REMARK 3 6 2.3998 - 2.2584 1.00 3350 137 0.1666 0.2039 REMARK 3 7 2.2584 - 2.1454 1.00 3371 141 0.1648 0.2097 REMARK 3 8 2.1454 - 2.0520 1.00 3360 146 0.1737 0.2152 REMARK 3 9 2.0520 - 1.9731 1.00 3375 141 0.1793 0.2020 REMARK 3 10 1.9731 - 1.9050 1.00 3338 143 0.1821 0.2287 REMARK 3 11 1.9050 - 1.8455 1.00 3358 138 0.1884 0.2567 REMARK 3 12 1.8455 - 1.7927 1.00 3333 145 0.1969 0.2188 REMARK 3 13 1.7927 - 1.7455 1.00 3356 138 0.2105 0.2646 REMARK 3 14 1.7455 - 1.7030 0.95 3182 149 0.2366 0.2894 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3947 REMARK 3 ANGLE : 0.981 5349 REMARK 3 CHIRALITY : 0.051 608 REMARK 3 PLANARITY : 0.004 671 REMARK 3 DIHEDRAL : 16.558 1488 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0163 14.7087 -15.0002 REMARK 3 T TENSOR REMARK 3 T11: 0.1205 T22: 0.2097 REMARK 3 T33: 0.1707 T12: 0.0282 REMARK 3 T13: 0.0223 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 4.7274 L22: 7.2143 REMARK 3 L33: 5.4570 L12: -2.0357 REMARK 3 L13: 2.3179 L23: -3.5027 REMARK 3 S TENSOR REMARK 3 S11: 0.2323 S12: 0.0520 S13: -0.3277 REMARK 3 S21: -0.5619 S22: -0.1012 S23: -0.3227 REMARK 3 S31: 0.4023 S32: 0.3043 S33: -0.0336 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0926 23.7939 -9.7751 REMARK 3 T TENSOR REMARK 3 T11: 0.1675 T22: 0.3400 REMARK 3 T33: 0.2595 T12: -0.0212 REMARK 3 T13: -0.0313 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 5.6778 L22: 7.3345 REMARK 3 L33: 8.1345 L12: -0.0791 REMARK 3 L13: 1.3483 L23: 0.5559 REMARK 3 S TENSOR REMARK 3 S11: -0.1966 S12: -0.1096 S13: 0.5127 REMARK 3 S21: 0.0892 S22: -0.0545 S23: -0.5778 REMARK 3 S31: -0.2666 S32: 0.6425 S33: 0.2144 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.5191 10.8763 -9.1452 REMARK 3 T TENSOR REMARK 3 T11: 0.1772 T22: 0.2836 REMARK 3 T33: 0.2014 T12: 0.0408 REMARK 3 T13: 0.0207 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 0.2067 L22: 4.2882 REMARK 3 L33: 8.8828 L12: 0.6641 REMARK 3 L13: 0.2619 L23: -3.5363 REMARK 3 S TENSOR REMARK 3 S11: 0.1764 S12: 0.0148 S13: 0.0878 REMARK 3 S21: -0.0953 S22: -0.2565 S23: -0.0423 REMARK 3 S31: 0.2683 S32: 0.3934 S33: 0.1417 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5654 14.2621 -26.3081 REMARK 3 T TENSOR REMARK 3 T11: 0.4714 T22: 0.3715 REMARK 3 T33: 0.3967 T12: 0.0496 REMARK 3 T13: -0.0426 T23: -0.0262 REMARK 3 L TENSOR REMARK 3 L11: 5.6712 L22: 6.3889 REMARK 3 L33: 6.2227 L12: -0.5532 REMARK 3 L13: -0.9949 L23: -0.6149 REMARK 3 S TENSOR REMARK 3 S11: -0.1040 S12: 0.3718 S13: 0.4198 REMARK 3 S21: 0.9574 S22: -0.1371 S23: -1.1202 REMARK 3 S31: 0.2428 S32: 0.5403 S33: 0.1583 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7244 21.1620 -17.4774 REMARK 3 T TENSOR REMARK 3 T11: 0.1431 T22: 0.1295 REMARK 3 T33: 0.1697 T12: 0.0076 REMARK 3 T13: -0.0325 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 2.7273 L22: 4.4998 REMARK 3 L33: 2.6450 L12: -1.3860 REMARK 3 L13: 0.4974 L23: -0.3614 REMARK 3 S TENSOR REMARK 3 S11: 0.1716 S12: 0.1558 S13: -0.2684 REMARK 3 S21: -0.4195 S22: -0.0858 S23: 0.2926 REMARK 3 S31: 0.1082 S32: 0.0133 S33: 0.0312 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1883 22.9332 -8.5241 REMARK 3 T TENSOR REMARK 3 T11: 0.1605 T22: 0.1877 REMARK 3 T33: 0.1738 T12: 0.0070 REMARK 3 T13: 0.0212 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 6.2081 L22: 4.7463 REMARK 3 L33: 3.5182 L12: 1.4453 REMARK 3 L13: 2.2445 L23: 0.9507 REMARK 3 S TENSOR REMARK 3 S11: 0.0483 S12: -0.4507 S13: 0.0171 REMARK 3 S21: 0.2110 S22: -0.0654 S23: 0.3488 REMARK 3 S31: 0.0395 S32: -0.3235 S33: 0.0139 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6712 9.8487 -6.8901 REMARK 3 T TENSOR REMARK 3 T11: 0.2363 T22: 0.2179 REMARK 3 T33: 0.2827 T12: 0.0042 REMARK 3 T13: -0.0035 T23: 0.0339 REMARK 3 L TENSOR REMARK 3 L11: 8.3671 L22: 8.7321 REMARK 3 L33: 6.1558 L12: 3.8810 REMARK 3 L13: 1.0386 L23: 1.4494 REMARK 3 S TENSOR REMARK 3 S11: 0.2187 S12: -0.2352 S13: -0.7952 REMARK 3 S21: 0.3494 S22: -0.0624 S23: 0.2838 REMARK 3 S31: 0.6674 S32: -0.3254 S33: -0.1809 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6178 20.0780 21.3759 REMARK 3 T TENSOR REMARK 3 T11: 0.2792 T22: 0.2147 REMARK 3 T33: 0.2499 T12: 0.0492 REMARK 3 T13: 0.0589 T23: -0.0513 REMARK 3 L TENSOR REMARK 3 L11: 2.9724 L22: 4.0422 REMARK 3 L33: 2.1677 L12: -0.2587 REMARK 3 L13: 0.1341 L23: -0.2430 REMARK 3 S TENSOR REMARK 3 S11: -0.0252 S12: -0.4380 S13: 0.4630 REMARK 3 S21: 0.2993 S22: 0.1308 S23: 0.2657 REMARK 3 S31: -0.4479 S32: -0.2125 S33: -0.0236 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5330 22.6305 16.9463 REMARK 3 T TENSOR REMARK 3 T11: 0.3420 T22: 0.3415 REMARK 3 T33: 0.3637 T12: 0.0743 REMARK 3 T13: -0.0133 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 8.0194 L22: 3.4057 REMARK 3 L33: 4.2699 L12: 1.0545 REMARK 3 L13: -1.1629 L23: 0.8871 REMARK 3 S TENSOR REMARK 3 S11: 0.2047 S12: -0.3845 S13: -0.1914 REMARK 3 S21: 0.4361 S22: -0.1916 S23: 0.0471 REMARK 3 S31: -0.6128 S32: -0.5692 S33: -0.2212 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 65 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9983 12.0578 18.6026 REMARK 3 T TENSOR REMARK 3 T11: 0.2677 T22: 0.4373 REMARK 3 T33: 0.6376 T12: 0.0080 REMARK 3 T13: -0.0667 T23: 0.0615 REMARK 3 L TENSOR REMARK 3 L11: 7.5385 L22: 8.3423 REMARK 3 L33: 9.8272 L12: 1.0143 REMARK 3 L13: 1.5937 L23: -4.3715 REMARK 3 S TENSOR REMARK 3 S11: 0.4136 S12: -0.9334 S13: -0.3917 REMARK 3 S21: 0.2465 S22: -0.1464 S23: 0.3398 REMARK 3 S31: 0.4049 S32: -0.3390 S33: -0.1312 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 75 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6942 5.6004 16.8127 REMARK 3 T TENSOR REMARK 3 T11: 0.1277 T22: 0.1303 REMARK 3 T33: 0.1062 T12: 0.0034 REMARK 3 T13: 0.0186 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 4.9437 L22: 5.6429 REMARK 3 L33: 1.3868 L12: -1.8491 REMARK 3 L13: 1.3350 L23: -0.4054 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: -0.0335 S13: -0.1402 REMARK 3 S21: 0.0133 S22: 0.0201 S23: 0.2712 REMARK 3 S31: 0.0416 S32: -0.1600 S33: -0.0483 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 93 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2230 4.0806 12.0552 REMARK 3 T TENSOR REMARK 3 T11: 0.2064 T22: 0.2450 REMARK 3 T33: 0.4930 T12: -0.0118 REMARK 3 T13: -0.1009 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 6.9606 L22: 1.0913 REMARK 3 L33: 2.5964 L12: -2.4033 REMARK 3 L13: 3.4017 L23: -0.6800 REMARK 3 S TENSOR REMARK 3 S11: 0.3741 S12: 0.0330 S13: -0.9320 REMARK 3 S21: -0.4002 S22: -0.0856 S23: 1.3491 REMARK 3 S31: 0.3909 S32: -0.2388 S33: -0.2470 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5184 10.1610 8.6781 REMARK 3 T TENSOR REMARK 3 T11: 0.3102 T22: 0.2988 REMARK 3 T33: 0.3267 T12: 0.0391 REMARK 3 T13: -0.0981 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 5.1606 L22: 3.6813 REMARK 3 L33: 3.5917 L12: 1.2032 REMARK 3 L13: -2.6989 L23: 0.2751 REMARK 3 S TENSOR REMARK 3 S11: 0.1611 S12: 0.7594 S13: -0.1043 REMARK 3 S21: -0.6160 S22: -0.0085 S23: 0.7862 REMARK 3 S31: 0.0540 S32: -0.7637 S33: -0.1653 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9958 7.2379 12.9811 REMARK 3 T TENSOR REMARK 3 T11: 0.1602 T22: 0.1734 REMARK 3 T33: 0.1414 T12: 0.0041 REMARK 3 T13: 0.0496 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 2.6395 L22: 4.1742 REMARK 3 L33: 3.4941 L12: 0.5201 REMARK 3 L13: 1.5586 L23: 0.9755 REMARK 3 S TENSOR REMARK 3 S11: -0.0858 S12: 0.0773 S13: 0.0360 REMARK 3 S21: -0.2816 S22: 0.1130 S23: -0.3024 REMARK 3 S31: -0.1184 S32: 0.2058 S33: -0.0262 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 152 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2528 20.0947 6.4173 REMARK 3 T TENSOR REMARK 3 T11: 0.3252 T22: 0.2284 REMARK 3 T33: 0.2014 T12: 0.0742 REMARK 3 T13: -0.0278 T23: 0.0518 REMARK 3 L TENSOR REMARK 3 L11: 7.0484 L22: 4.6871 REMARK 3 L33: 6.5032 L12: 0.2612 REMARK 3 L13: 2.0806 L23: -1.3577 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.8489 S13: 0.3822 REMARK 3 S21: -0.7208 S22: -0.1742 S23: 0.1960 REMARK 3 S31: -0.3036 S32: -0.1789 S33: 0.2451 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0195 30.2706 42.8030 REMARK 3 T TENSOR REMARK 3 T11: 0.2550 T22: 0.4959 REMARK 3 T33: 0.2804 T12: 0.0117 REMARK 3 T13: -0.0097 T23: 0.1995 REMARK 3 L TENSOR REMARK 3 L11: 0.7950 L22: 3.0761 REMARK 3 L33: 3.1246 L12: -0.6404 REMARK 3 L13: 1.2672 L23: -0.3766 REMARK 3 S TENSOR REMARK 3 S11: 0.2220 S12: -1.2118 S13: -0.6770 REMARK 3 S21: 0.5309 S22: 0.0287 S23: -0.1357 REMARK 3 S31: 0.4384 S32: -0.4578 S33: -0.1665 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 26 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9650 25.3204 45.6603 REMARK 3 T TENSOR REMARK 3 T11: 0.4728 T22: 0.6937 REMARK 3 T33: 0.5623 T12: -0.0020 REMARK 3 T13: -0.0102 T23: 0.3295 REMARK 3 L TENSOR REMARK 3 L11: 2.1885 L22: 1.0234 REMARK 3 L33: 4.7424 L12: 0.6860 REMARK 3 L13: 2.0439 L23: 0.6308 REMARK 3 S TENSOR REMARK 3 S11: 0.3671 S12: -0.1105 S13: -0.6251 REMARK 3 S21: 0.2222 S22: 0.1227 S23: 0.1662 REMARK 3 S31: 0.5772 S32: -0.2996 S33: -0.3660 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 49 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2224 31.9704 48.6200 REMARK 3 T TENSOR REMARK 3 T11: 0.7305 T22: 0.6102 REMARK 3 T33: 0.4886 T12: 0.1092 REMARK 3 T13: 0.0438 T23: 0.1851 REMARK 3 L TENSOR REMARK 3 L11: 7.6506 L22: 4.9444 REMARK 3 L33: 3.2951 L12: -5.0328 REMARK 3 L13: 4.5862 L23: -2.3497 REMARK 3 S TENSOR REMARK 3 S11: -0.4382 S12: -0.4779 S13: 0.4019 REMARK 3 S21: 0.3670 S22: 0.1627 S23: -0.1295 REMARK 3 S31: -0.5660 S32: -0.2268 S33: 0.2370 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 58 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6461 41.8268 47.2940 REMARK 3 T TENSOR REMARK 3 T11: 0.5812 T22: 1.0232 REMARK 3 T33: 0.4957 T12: 0.0385 REMARK 3 T13: 0.1476 T23: -0.1207 REMARK 3 L TENSOR REMARK 3 L11: 0.6244 L22: 6.9289 REMARK 3 L33: 3.4600 L12: 0.5531 REMARK 3 L13: 1.4352 L23: 1.9659 REMARK 3 S TENSOR REMARK 3 S11: -0.1984 S12: -1.1969 S13: 0.1352 REMARK 3 S21: 1.0168 S22: -0.1842 S23: 1.4260 REMARK 3 S31: -0.0155 S32: -1.1054 S33: 0.2802 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 77 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8337 40.1819 32.5163 REMARK 3 T TENSOR REMARK 3 T11: 0.1890 T22: 0.2151 REMARK 3 T33: 0.1306 T12: 0.0474 REMARK 3 T13: 0.0056 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 3.3265 L22: 3.1109 REMARK 3 L33: 6.1058 L12: 0.8681 REMARK 3 L13: 2.1853 L23: 2.2644 REMARK 3 S TENSOR REMARK 3 S11: -0.2296 S12: -0.5743 S13: 0.1518 REMARK 3 S21: -0.1008 S22: 0.0512 S23: 0.2741 REMARK 3 S31: -0.5612 S32: -0.3340 S33: 0.2009 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 104 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1368 34.5544 30.0850 REMARK 3 T TENSOR REMARK 3 T11: 0.1258 T22: 0.1618 REMARK 3 T33: 0.1535 T12: 0.0146 REMARK 3 T13: 0.0072 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 5.6662 L22: 3.8923 REMARK 3 L33: 4.7471 L12: 0.3651 REMARK 3 L13: 1.1932 L23: -0.0606 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: -0.1850 S13: -0.3944 REMARK 3 S21: -0.0880 S22: 0.0548 S23: -0.2276 REMARK 3 S31: -0.1613 S32: -0.2378 S33: -0.0380 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 127 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7779 40.2788 23.5030 REMARK 3 T TENSOR REMARK 3 T11: 0.2578 T22: 0.2024 REMARK 3 T33: 0.1696 T12: -0.0597 REMARK 3 T13: 0.0370 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 5.4575 L22: 1.9365 REMARK 3 L33: 7.2023 L12: 1.6847 REMARK 3 L13: 3.2804 L23: 3.7276 REMARK 3 S TENSOR REMARK 3 S11: -0.4814 S12: 0.6422 S13: -0.0126 REMARK 3 S21: -0.4337 S22: 0.2817 S23: -0.2226 REMARK 3 S31: -0.2711 S32: 0.3869 S33: 0.1050 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 138 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1571 27.9646 31.2326 REMARK 3 T TENSOR REMARK 3 T11: 0.1600 T22: 0.1804 REMARK 3 T33: 0.4115 T12: 0.0153 REMARK 3 T13: -0.0154 T23: 0.0410 REMARK 3 L TENSOR REMARK 3 L11: 2.8917 L22: 5.9790 REMARK 3 L33: 2.8030 L12: 2.8876 REMARK 3 L13: 0.6472 L23: -1.3420 REMARK 3 S TENSOR REMARK 3 S11: 0.0770 S12: 0.0184 S13: -0.6355 REMARK 3 S21: 0.0530 S22: 0.0869 S23: -0.4030 REMARK 3 S31: 0.3289 S32: 0.1630 S33: -0.0770 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 152 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3005 36.0340 40.4260 REMARK 3 T TENSOR REMARK 3 T11: 0.2589 T22: 0.3426 REMARK 3 T33: 0.3220 T12: 0.0110 REMARK 3 T13: -0.0833 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 4.0734 L22: 4.2209 REMARK 3 L33: 5.3832 L12: 3.7664 REMARK 3 L13: 2.7816 L23: 3.7217 REMARK 3 S TENSOR REMARK 3 S11: -0.1101 S12: -0.3893 S13: -0.1364 REMARK 3 S21: 0.2056 S22: 0.1531 S23: -0.6599 REMARK 3 S31: -0.1457 S32: 0.4139 S33: -0.0806 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4M1T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48946 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : 0.04100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.4430 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.44300 REMARK 200 R SYM FOR SHELL (I) : 0.44300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.067 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: PDB ENTRY 3GFT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG4000, 0.2M NH4CH3COO, 0.1M NA REMARK 280 -CITRATE, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.08300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.74000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.08300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.74000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 357 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 309 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLU A 31 REMARK 465 TYR A 32 REMARK 465 ASP A 33 REMARK 465 PRO A 34 REMARK 465 THR A 35 REMARK 465 LYS A 169 REMARK 465 GLY B 0 REMARK 465 GLU B 31 REMARK 465 TYR B 32 REMARK 465 ASP B 33 REMARK 465 PRO B 34 REMARK 465 THR B 35 REMARK 465 ILE B 36 REMARK 465 LYS B 169 REMARK 465 GLY C 0 REMARK 465 ASP C 30 REMARK 465 GLU C 31 REMARK 465 TYR C 32 REMARK 465 ASP C 33 REMARK 465 PRO C 34 REMARK 465 THR C 35 REMARK 465 ILE C 36 REMARK 465 GLU C 37 REMARK 465 ASP C 38 REMARK 465 GLN C 61 REMARK 465 GLU C 62 REMARK 465 GLU C 63 REMARK 465 TYR C 64 REMARK 465 SER C 65 REMARK 465 ALA C 66 REMARK 465 MET C 67 REMARK 465 ARG C 68 REMARK 465 LYS C 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 29 CG1 CG2 REMARK 470 ILE A 36 CG1 CG2 CD1 REMARK 470 GLN A 61 CG CD OE1 NE2 REMARK 470 ARG A 68 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 ASP B 30 CG OD1 OD2 REMARK 470 SER B 65 OG REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 LYS C 5 CG CD CE NZ REMARK 470 GLN C 43 CG CD OE1 NE2 REMARK 470 ARG C 102 CG CD NE CZ NH1 NH2 REMARK 470 ASP C 105 CG OD1 OD2 REMARK 470 GLU C 107 CG CD OE1 OE2 REMARK 470 ASP C 108 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 96 O HOH B 324 2.03 REMARK 500 OE2 GLU A 37 O HOH A 343 2.13 REMARK 500 OE1 GLU B 62 O HOH B 344 2.16 REMARK 500 OD1 ASP B 92 O HOH B 338 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HG1 THR A 50 HG1 THR A 50 2655 1.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 108 78.51 -119.89 REMARK 500 ARG A 149 -1.97 79.22 REMARK 500 LYS B 117 33.68 70.88 REMARK 500 SER B 122 44.88 -92.68 REMARK 500 ASP C 108 60.04 -104.94 REMARK 500 LYS C 117 34.69 71.95 REMARK 500 ARG C 149 -0.31 80.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 21M B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP C 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4L8G RELATED DB: PDB REMARK 900 RELATED MUTANT REMARK 900 RELATED ID: 4LUC RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4LYF RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4LYJ RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M1O RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4L9W RELATED DB: PDB REMARK 900 STRUCTURE OF RELATED PROTEIN REMARK 900 RELATED ID: 4L9S RELATED DB: PDB REMARK 900 STRUCTURE OF RELATED PROTEIN REMARK 900 RELATED ID: 4LPK RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN REMARK 900 RELATED ID: 4LV6 RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M1S RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4LYH RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4LRW RELATED DB: PDB REMARK 900 PROTEIN WITHOUT SMALL MOLECULE BOUND REMARK 900 RELATED ID: 4M1W RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M1Y RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M21 RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M22 RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE IN THE STRUCTURE REPRESENTS ISOFORM 2B OF GTPASE KRAS. REMARK 999 THIS ISOFORM DIFFERS FROM THE CANONICAL SEQUENCE AS FOLLOW: 151-153 REMARK 999 (RVE TO GVD) AND 165-169 (QYRLK TO KHKEK) DBREF 4M1T A 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 4M1T B 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 4M1T C 1 169 UNP P01116 RASK_HUMAN 1 169 SEQADV 4M1T GLY A 0 UNP P01116 EXPRESSION TAG SEQADV 4M1T CYS A 12 UNP P01116 GLY 12 VARIANT SEQADV 4M1T SER A 51 UNP P01116 CYS 51 ENGINEERED MUTATION SEQADV 4M1T LEU A 80 UNP P01116 CYS 80 ENGINEERED MUTATION SEQADV 4M1T SER A 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQADV 4M1T GLY A 151 UNP P01116 ARG 151 SEE REMARK 999 SEQADV 4M1T ASP A 153 UNP P01116 GLU 153 SEE REMARK 999 SEQADV 4M1T LYS A 165 UNP P01116 GLN 165 SEE REMARK 999 SEQADV 4M1T HIS A 166 UNP P01116 TYR 166 SEE REMARK 999 SEQADV 4M1T LYS A 167 UNP P01116 ARG 167 SEE REMARK 999 SEQADV 4M1T GLU A 168 UNP P01116 LEU 168 SEE REMARK 999 SEQADV 4M1T GLY B 0 UNP P01116 EXPRESSION TAG SEQADV 4M1T CYS B 12 UNP P01116 GLY 12 VARIANT SEQADV 4M1T SER B 51 UNP P01116 CYS 51 ENGINEERED MUTATION SEQADV 4M1T LEU B 80 UNP P01116 CYS 80 ENGINEERED MUTATION SEQADV 4M1T SER B 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQADV 4M1T GLY B 151 UNP P01116 ARG 151 SEE REMARK 999 SEQADV 4M1T ASP B 153 UNP P01116 GLU 153 SEE REMARK 999 SEQADV 4M1T LYS B 165 UNP P01116 GLN 165 SEE REMARK 999 SEQADV 4M1T HIS B 166 UNP P01116 TYR 166 SEE REMARK 999 SEQADV 4M1T LYS B 167 UNP P01116 ARG 167 SEE REMARK 999 SEQADV 4M1T GLU B 168 UNP P01116 LEU 168 SEE REMARK 999 SEQADV 4M1T GLY C 0 UNP P01116 EXPRESSION TAG SEQADV 4M1T CYS C 12 UNP P01116 GLY 12 VARIANT SEQADV 4M1T SER C 51 UNP P01116 CYS 51 ENGINEERED MUTATION SEQADV 4M1T LEU C 80 UNP P01116 CYS 80 ENGINEERED MUTATION SEQADV 4M1T SER C 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQADV 4M1T GLY C 151 UNP P01116 ARG 151 SEE REMARK 999 SEQADV 4M1T ASP C 153 UNP P01116 GLU 153 SEE REMARK 999 SEQADV 4M1T LYS C 165 UNP P01116 GLN 165 SEE REMARK 999 SEQADV 4M1T HIS C 166 UNP P01116 TYR 166 SEE REMARK 999 SEQADV 4M1T LYS C 167 UNP P01116 ARG 167 SEE REMARK 999 SEQADV 4M1T GLU C 168 UNP P01116 LEU 168 SEE REMARK 999 SEQRES 1 A 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA CYS SEQRES 2 A 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR SER SEQRES 5 A 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 A 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 170 PHE LEU LEU VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 170 LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 A 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 A 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 A 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 A 170 LYS SEQRES 1 B 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA CYS SEQRES 2 B 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 B 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 B 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR SER SEQRES 5 B 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 B 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 B 170 PHE LEU LEU VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 B 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 B 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 B 170 LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 B 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 B 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 B 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 B 170 LYS SEQRES 1 C 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA CYS SEQRES 2 C 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 C 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 C 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR SER SEQRES 5 C 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 C 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 C 170 PHE LEU LEU VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 C 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 C 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 C 170 LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 C 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 C 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 C 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 C 170 LYS HET GDP A 201 32 HET 21M B 201 43 HET GDP B 202 32 HET GDP C 201 32 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM 21M N-{1-[(2,4-DICHLOROPHENOXY)ACETYL]PIPERIDIN-4- HETNAM 2 21M YL}ETHANESULFONAMIDE FORMUL 4 GDP 3(C10 H15 N5 O11 P2) FORMUL 5 21M C15 H20 CL2 N2 O4 S FORMUL 8 HOH *163(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 TYR A 64 GLY A 75 1 12 HELIX 3 3 ASN A 86 ASP A 92 1 7 HELIX 4 4 ASP A 92 ASP A 105 1 14 HELIX 5 5 ASP A 126 GLY A 138 1 13 HELIX 6 6 GLY A 151 GLU A 168 1 18 HELIX 7 7 GLY B 15 ASN B 26 1 12 HELIX 8 8 TYR B 64 GLY B 75 1 12 HELIX 9 9 ASN B 86 ASP B 92 1 7 HELIX 10 10 ASP B 92 ASP B 105 1 14 HELIX 11 11 ASP B 126 GLY B 138 1 13 HELIX 12 12 GLY B 151 GLU B 168 1 18 HELIX 13 13 GLY C 15 ASN C 26 1 12 HELIX 14 14 GLN C 70 GLY C 75 1 6 HELIX 15 15 ASN C 86 ASP C 105 1 20 HELIX 16 16 ASP C 126 GLY C 138 1 13 HELIX 17 17 GLY C 151 GLU C 168 1 18 SHEET 1 A 6 SER A 39 ILE A 46 0 SHEET 2 A 6 GLU A 49 THR A 58 -1 O SER A 51 N VAL A 44 SHEET 3 A 6 THR A 2 VAL A 9 1 N VAL A 8 O LEU A 56 SHEET 4 A 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 A 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 A 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 B 6 ARG B 41 ILE B 46 0 SHEET 2 B 6 GLU B 49 ILE B 55 -1 O SER B 51 N VAL B 44 SHEET 3 B 6 THR B 2 VAL B 9 1 N TYR B 4 O ASP B 54 SHEET 4 B 6 GLY B 77 ALA B 83 1 O VAL B 81 N VAL B 9 SHEET 5 B 6 MET B 111 ASN B 116 1 O VAL B 114 N LEU B 80 SHEET 6 B 6 PHE B 141 GLU B 143 1 O ILE B 142 N LEU B 113 SHEET 1 C 6 TYR C 40 ILE C 46 0 SHEET 2 C 6 GLU C 49 ASP C 57 -1 O ILE C 55 N TYR C 40 SHEET 3 C 6 THR C 2 VAL C 9 1 N LEU C 6 O LEU C 56 SHEET 4 C 6 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 5 C 6 MET C 111 ASN C 116 1 O ASN C 116 N PHE C 82 SHEET 6 C 6 PHE C 141 GLU C 143 1 O ILE C 142 N LEU C 113 LINK SG CYS B 12 C16 21M B 201 1555 1555 1.83 SITE 1 AC1 19 GLY A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC1 19 SER A 17 ALA A 18 PHE A 28 VAL A 29 SITE 3 AC1 19 ASP A 30 ASN A 116 LYS A 117 ASP A 119 SITE 4 AC1 19 LEU A 120 SER A 145 ALA A 146 LYS A 147 SITE 5 AC1 19 HOH A 312 HOH A 318 HOH A 324 SITE 1 AC2 11 VAL B 9 GLY B 10 CYS B 12 GLU B 62 SITE 2 AC2 11 ARG B 68 TYR B 71 MET B 72 TYR B 96 SITE 3 AC2 11 GLN B 99 HOH B 344 ARG C 73 SITE 1 AC3 18 GLY B 13 VAL B 14 GLY B 15 LYS B 16 SITE 2 AC3 18 SER B 17 ALA B 18 PHE B 28 ASP B 30 SITE 3 AC3 18 ASN B 116 LYS B 117 ASP B 119 LEU B 120 SITE 4 AC3 18 SER B 145 ALA B 146 LYS B 147 HOH B 319 SITE 5 AC3 18 HOH B 327 HOH B 336 SITE 1 AC4 16 GLY C 13 VAL C 14 GLY C 15 LYS C 16 SITE 2 AC4 16 SER C 17 ALA C 18 PHE C 28 ASN C 116 SITE 3 AC4 16 LYS C 117 ASP C 119 LEU C 120 SER C 145 SITE 4 AC4 16 ALA C 146 LYS C 147 HOH C 313 HOH C 319 CRYST1 68.166 83.480 85.747 90.00 110.63 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014670 0.000000 0.005523 0.00000 SCALE2 0.000000 0.011979 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012461 0.00000