PDB Short entry for 4MEI HEADER PROTEIN TRANSPORT 26-AUG-13 4MEI TITLE CRYSTAL STRUCTURE OF A VIRB8 TYPE IV SECRETION SYSTEM MACHINERY TITLE 2 SOLUBLE DOMAIN FROM BARTONELLA TRIBOCORUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: VIRB8 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 51-222; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA TRIBOCORUM; SOURCE 3 ORGANISM_TAXID: 382640; SOURCE 4 STRAIN: CIP 105476; SOURCE 5 GENE: BT_1695, VIRB8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BG1861 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, TRANSMEMBRANE PROTEIN, TYPE IV SECRETION KEYWDS 4 SYSTEM, T4SS, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 28-FEB-24 4MEI 1 SEQADV REVDAT 3 23-MAR-16 4MEI 1 JRNL REVDAT 2 16-DEC-15 4MEI 1 JRNL REVDAT 1 05-MAR-14 4MEI 0 JRNL AUTH J.J.GILLESPIE,I.Q.PHAN,H.SCHEIB,S.SUBRAMANIAN,T.E.EDWARDS, JRNL AUTH 2 S.S.LEHMAN,H.PIITULAINEN,M.S.RAHMAN,K.E.RENNOLL-BANKERT, JRNL AUTH 3 B.L.STAKER,S.TAIRA,R.STACY,P.J.MYLER,A.F.AZAD,A.T.PULLIAINEN JRNL TITL STRUCTURAL INSIGHT INTO HOW BACTERIA PREVENT INTERFERENCE JRNL TITL 2 BETWEEN MULTIPLE DIVERGENT TYPE IV SECRETION SYSTEMS. JRNL REF MBIO V. 6 01867 2015 JRNL REFN ESSN 2150-7511 JRNL PMID 26646013 JRNL DOI 10.1128/MBIO.01867-15 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 6131 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 286 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 417 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1092 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 14 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.10000 REMARK 3 B22 (A**2) : -1.10000 REMARK 3 B33 (A**2) : 2.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.514 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.312 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.212 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.597 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.904 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1129 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1002 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1538 ; 1.477 ; 1.922 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2290 ; 0.814 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 137 ; 6.244 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 60 ;32.615 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 172 ;17.994 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;18.099 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 166 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1312 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 295 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 545 ; 2.788 ; 4.459 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 544 ; 2.778 ; 4.454 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 680 ; 4.383 ; 6.672 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 85 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2964 46.3940 20.7892 REMARK 3 T TENSOR REMARK 3 T11: 0.1577 T22: 0.0386 REMARK 3 T33: 0.0832 T12: -0.0209 REMARK 3 T13: -0.0486 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 1.8921 L22: 1.5407 REMARK 3 L33: 1.3480 L12: -0.2780 REMARK 3 L13: -0.4595 L23: 0.4404 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: 0.0447 S13: -0.0234 REMARK 3 S21: -0.1816 S22: 0.0523 S23: -0.0559 REMARK 3 S31: 0.0258 S32: -0.0796 S33: -0.0723 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 4MEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081809. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6166 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.58900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.860 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BATRA.18388.B.B2.PS01799 AT 3.84 MG/ML REMARK 280 AGAINST JCSG+ F10 1.1 M NA MALONATE, 0.1 M HEPES PH 7.0, 0.5% REMARK 280 JEFFAMINE ED2001 WITH 20% ETHYLENE GLYCOL AS CRYO-PROTECTANT, REMARK 280 CRYSTAL TRACKING ID 244429F10, UNIQUE PUCK ID JCP2-9, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.23500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.77000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.77000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.61750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.77000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.77000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.85250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.77000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.77000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.61750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.77000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.77000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 94.85250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 63.23500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 61.54000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 61.54000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 63.23500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 42 REMARK 465 ALA A 43 REMARK 465 HIS A 44 REMARK 465 HIS A 45 REMARK 465 HIS A 46 REMARK 465 HIS A 47 REMARK 465 HIS A 48 REMARK 465 HIS A 49 REMARK 465 MET A 50 REMARK 465 ALA A 51 REMARK 465 LEU A 52 REMARK 465 THR A 53 REMARK 465 PRO A 54 REMARK 465 LEU A 55 REMARK 465 LYS A 56 REMARK 465 THR A 57 REMARK 465 VAL A 58 REMARK 465 GLU A 59 REMARK 465 PRO A 60 REMARK 465 PHE A 61 REMARK 465 VAL A 62 REMARK 465 ILE A 63 REMARK 465 ARG A 64 REMARK 465 VAL A 65 REMARK 465 ASP A 66 REMARK 465 ASN A 67 REMARK 465 SER A 68 REMARK 465 THR A 69 REMARK 465 GLY A 70 REMARK 465 ILE A 71 REMARK 465 ILE A 72 REMARK 465 ASP A 73 REMARK 465 THR A 74 REMARK 465 VAL A 75 REMARK 465 SER A 76 REMARK 465 ALA A 77 REMARK 465 LEU A 78 REMARK 465 LYS A 79 REMARK 465 GLU A 80 REMARK 465 SER A 81 REMARK 465 PRO A 82 REMARK 465 SER A 83 REMARK 465 ASP A 84 REMARK 465 ILE A 221 REMARK 465 LYS A 222 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 114 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 LYS A 161 CG CD CE NZ REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 ASN A 194 CG OD1 ND2 REMARK 470 ILE A 197 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 194 54.82 -93.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JF8 RELATED DB: PDB REMARK 900 TRWG T4SS FROM BARTONELLA BIRTLESII REMARK 900 RELATED ID: 4KZ1 RELATED DB: PDB REMARK 900 VIRB8 T4SS FROM BARTONELLA GRAHAMII REMARK 900 RELATED ID: 4LSO RELATED DB: PDB REMARK 900 VIRB8 T4SS FROM BARTONELLA QUINTANA REMARK 900 RELATED ID: 2BHM RELATED DB: PDB REMARK 900 VIRB8 T4SS FROM BRUCELLA SUIS REMARK 900 RELATED ID: 2CC3 RELATED DB: PDB REMARK 900 VIRB8 FROM AGROBACTERIUM TUMEFACIENS REMARK 900 RELATED ID: SSGCID-BATRA.18388.B RELATED DB: TARGETTRACK DBREF 4MEI A 51 222 UNP A9IWN6 A9IWN6_BART1 51 222 SEQADV 4MEI MET A 42 UNP A9IWN6 EXPRESSION TAG SEQADV 4MEI ALA A 43 UNP A9IWN6 EXPRESSION TAG SEQADV 4MEI HIS A 44 UNP A9IWN6 EXPRESSION TAG SEQADV 4MEI HIS A 45 UNP A9IWN6 EXPRESSION TAG SEQADV 4MEI HIS A 46 UNP A9IWN6 EXPRESSION TAG SEQADV 4MEI HIS A 47 UNP A9IWN6 EXPRESSION TAG SEQADV 4MEI HIS A 48 UNP A9IWN6 EXPRESSION TAG SEQADV 4MEI HIS A 49 UNP A9IWN6 EXPRESSION TAG SEQADV 4MEI MET A 50 UNP A9IWN6 EXPRESSION TAG SEQRES 1 A 181 MET ALA HIS HIS HIS HIS HIS HIS MET ALA LEU THR PRO SEQRES 2 A 181 LEU LYS THR VAL GLU PRO PHE VAL ILE ARG VAL ASP ASN SEQRES 3 A 181 SER THR GLY ILE ILE ASP THR VAL SER ALA LEU LYS GLU SEQRES 4 A 181 SER PRO SER ASP TYR ASP GLU ALA ILE THR ARG TYR PHE SEQRES 5 A 181 ALA SER GLN TYR VAL ARG ALA ARG GLU GLY PHE GLN ALA SEQRES 6 A 181 SER GLU ALA GLU ASN SER PHE ARG LEU VAL SER LEU LEU SEQRES 7 A 181 SER SER PRO LYS GLU GLN ASN ARG PHE ALA LYS TRP TYR SEQRES 8 A 181 ALA GLY ASN ASN PRO GLU SER PRO GLN ASN ILE TYR HIS SEQRES 9 A 181 ASN MET ILE ALA THR VAL THR ILE LYS SER ILE SER PHE SEQRES 10 A 181 ILE SER LYS ASP LEU ILE GLN VAL ARG TYR TYR LYS THR SEQRES 11 A 181 VAL ARG ASP PHE SER GLU LYS GLU THR ILE SER HIS TRP SEQRES 12 A 181 VAL SER ILE LEU ASN PHE SER TYR VAL ASN ALA HIS ILE SEQRES 13 A 181 SER THR SER ASP ARG LEU ILE ASN PRO LEU GLY PHE GLN SEQRES 14 A 181 VAL SER GLU TYR ARG SER ASP PRO GLU VAL ILE LYS FORMUL 2 HOH *14(H2 O) HELIX 1 1 ASP A 86 GLY A 103 1 18 HELIX 2 2 GLN A 105 SER A 107 5 3 HELIX 3 3 GLU A 108 LEU A 119 1 12 HELIX 4 4 SER A 121 ALA A 133 1 13 HELIX 5 5 SER A 139 TYR A 144 1 6 SHEET 1 A 4 ILE A 148 SER A 160 0 SHEET 2 A 4 LEU A 163 ARG A 173 -1 O GLN A 165 N SER A 157 SHEET 3 A 4 THR A 180 TYR A 192 -1 O TRP A 184 N TYR A 168 SHEET 4 A 4 PHE A 209 PRO A 218 -1 O ASP A 217 N VAL A 185 CRYST1 61.540 61.540 126.470 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016250 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016250 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007907 0.00000