PDB Short entry for 4MU7 HEADER APOPTOSIS INHIBITOR 20-SEP-13 4MU7 TITLE CRYSTAL STRUCTURE OF CIAP1 BIR3 BOUND TO T3450325 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BIR3 (UNP RESIDUES 260-352); COMPND 5 SYNONYM: C-IAP1, IAP HOMOLOG B, INHIBITOR OF APOPTOSIS PROTEIN 2, COMPND 6 IAP-2, HIAP-2, HIAP2, RING FINGER PROTEIN 48, TNFR2-TRAF-SIGNALING COMPND 7 COMPLEX PROTEIN 2; COMPND 8 EC: 6.3.2.-; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: API1, BIRC2, IAP2, MIHB, RNF48; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BI21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS RING-TYPE ZINC FINGER, LIGASE, APOPTOSIS INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR G.P.SNELL,D.R.DOUGAN REVDAT 2 28-FEB-24 4MU7 1 REMARK SEQADV LINK REVDAT 1 11-DEC-13 4MU7 0 JRNL AUTH Z.SHIOKAWA,K.HASHIMOTO,B.SAITO,Y.OGURO,H.SUMI,M.YABUKI, JRNL AUTH 2 M.YOSHIMATSU,Y.KOSUGI,Y.DEBORI,N.MORISHITA,D.R.DOUGAN, JRNL AUTH 3 G.P.SNELL,S.YOSHIDA,T.ISHIKAWA JRNL TITL DESIGN, SYNTHESIS, AND BIOLOGICAL ACTIVITIES OF NOVEL JRNL TITL 2 HEXAHYDROPYRAZINO[1,2-A]INDOLE DERIVATIVES AS POTENT JRNL TITL 3 INHIBITORS OF APOPTOSIS (IAP) PROTEINS ANTAGONISTS WITH JRNL TITL 4 IMPROVED MEMBRANE PERMEABILITY ACROSS MDR1 EXPRESSING CELLS. JRNL REF BIOORG.MED.CHEM. V. 21 7938 2013 JRNL REFN ISSN 0968-0896 JRNL PMID 24169315 JRNL DOI 10.1016/J.BMC.2013.09.067 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 23487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1265 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1307 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1496 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.71000 REMARK 3 B22 (A**2) : -1.44000 REMARK 3 B33 (A**2) : 3.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.111 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.440 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1689 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1157 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2294 ; 1.281 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2767 ; 0.864 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 192 ; 4.573 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;32.524 ;22.472 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 262 ;15.869 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.641 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 218 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1873 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 393 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 257 A 346 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2023 -6.4608 -12.2215 REMARK 3 T TENSOR REMARK 3 T11: 0.0736 T22: 0.0998 REMARK 3 T33: 0.1066 T12: 0.0047 REMARK 3 T13: -0.0291 T23: 0.0613 REMARK 3 L TENSOR REMARK 3 L11: 1.3700 L22: 1.2851 REMARK 3 L33: 2.0918 L12: 0.0177 REMARK 3 L13: -0.0595 L23: -1.6222 REMARK 3 S TENSOR REMARK 3 S11: 0.0044 S12: -0.1636 S13: -0.2289 REMARK 3 S21: -0.0754 S22: -0.0602 S23: -0.0206 REMARK 3 S31: 0.0412 S32: 0.0718 S33: 0.0558 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 255 B 345 REMARK 3 ORIGIN FOR THE GROUP (A): -0.1524 18.0784 -26.3886 REMARK 3 T TENSOR REMARK 3 T11: 0.1799 T22: 0.0315 REMARK 3 T33: 0.1511 T12: -0.0150 REMARK 3 T13: -0.0256 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 1.2948 L22: 2.0764 REMARK 3 L33: 2.6466 L12: -0.6827 REMARK 3 L13: 0.8056 L23: -2.2867 REMARK 3 S TENSOR REMARK 3 S11: -0.2297 S12: 0.0546 S13: 0.1800 REMARK 3 S21: 0.1944 S22: -0.0876 S23: -0.2283 REMARK 3 S31: -0.1030 S32: 0.1031 S33: 0.3173 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4MU7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000082370. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : SINGLE-CRYSTAL SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25323 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5M AMMONIUM CHLORIDE, 0.1M TRIS, PH REMARK 280 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 15.49100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.81100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.16000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.81100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 15.49100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.16000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 232 REMARK 465 GLY A 233 REMARK 465 SER A 234 REMARK 465 SER A 235 REMARK 465 HIS A 236 REMARK 465 HIS A 237 REMARK 465 HIS A 238 REMARK 465 HIS A 239 REMARK 465 HIS A 240 REMARK 465 HIS A 241 REMARK 465 SER A 242 REMARK 465 SER A 243 REMARK 465 GLY A 244 REMARK 465 GLU A 245 REMARK 465 ASN A 246 REMARK 465 LEU A 247 REMARK 465 TYR A 248 REMARK 465 PHE A 249 REMARK 465 GLN A 250 REMARK 465 GLY A 251 REMARK 465 GLY A 252 REMARK 465 SER A 253 REMARK 465 SER A 254 REMARK 465 ILE A 255 REMARK 465 SER A 256 REMARK 465 MET B 232 REMARK 465 GLY B 233 REMARK 465 SER B 234 REMARK 465 SER B 235 REMARK 465 HIS B 236 REMARK 465 HIS B 237 REMARK 465 HIS B 238 REMARK 465 HIS B 239 REMARK 465 HIS B 240 REMARK 465 HIS B 241 REMARK 465 SER B 242 REMARK 465 SER B 243 REMARK 465 GLY B 244 REMARK 465 GLU B 245 REMARK 465 ASN B 246 REMARK 465 LEU B 247 REMARK 465 TYR B 248 REMARK 465 PHE B 249 REMARK 465 GLN B 250 REMARK 465 GLY B 251 REMARK 465 GLY B 252 REMARK 465 TYR B 346 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 514 O HOH B 547 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 295 -123.08 48.11 REMARK 500 ASN B 295 -128.30 51.21 REMARK 500 CYS B 302 -62.47 -90.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 300 SG REMARK 620 2 CYS A 303 SG 108.6 REMARK 620 3 HIS A 320 NE2 98.4 117.6 REMARK 620 4 CYS A 327 SG 114.1 109.7 108.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 300 SG REMARK 620 2 CYS B 303 SG 107.8 REMARK 620 3 HIS B 320 NE2 104.0 115.4 REMARK 620 4 CYS B 327 SG 115.4 108.7 105.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2DY A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2DY B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4MTI RELATED DB: PDB DBREF 4MU7 A 254 346 UNP Q13490 BIRC2_HUMAN 260 352 DBREF 4MU7 B 254 346 UNP Q13490 BIRC2_HUMAN 260 352 SEQADV 4MU7 MET A 232 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLY A 233 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER A 234 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER A 235 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS A 236 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS A 237 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS A 238 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS A 239 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS A 240 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS A 241 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER A 242 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER A 243 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLY A 244 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLU A 245 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 ASN A 246 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 LEU A 247 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 TYR A 248 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 PHE A 249 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLN A 250 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLY A 251 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLY A 252 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER A 253 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 MET B 232 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLY B 233 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER B 234 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER B 235 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS B 236 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS B 237 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS B 238 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS B 239 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS B 240 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 HIS B 241 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER B 242 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER B 243 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLY B 244 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLU B 245 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 ASN B 246 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 LEU B 247 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 TYR B 248 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 PHE B 249 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLN B 250 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLY B 251 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 GLY B 252 UNP Q13490 EXPRESSION TAG SEQADV 4MU7 SER B 253 UNP Q13490 EXPRESSION TAG SEQRES 1 A 115 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 115 GLU ASN LEU TYR PHE GLN GLY GLY SER SER ILE SER ASN SEQRES 3 A 115 LEU SER MET GLN THR HIS ALA ALA ARG MET ARG THR PHE SEQRES 4 A 115 MET TYR TRP PRO SER SER VAL PRO VAL GLN PRO GLU GLN SEQRES 5 A 115 LEU ALA SER ALA GLY PHE TYR TYR VAL GLY ARG ASN ASP SEQRES 6 A 115 ASP VAL LYS CYS PHE CYS CYS ASP GLY GLY LEU ARG CYS SEQRES 7 A 115 TRP GLU SER GLY ASP ASP PRO TRP VAL GLU HIS ALA LYS SEQRES 8 A 115 TRP PHE PRO ARG CYS GLU PHE LEU ILE ARG MET LYS GLY SEQRES 9 A 115 GLN GLU PHE VAL ASP GLU ILE GLN GLY ARG TYR SEQRES 1 B 115 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 115 GLU ASN LEU TYR PHE GLN GLY GLY SER SER ILE SER ASN SEQRES 3 B 115 LEU SER MET GLN THR HIS ALA ALA ARG MET ARG THR PHE SEQRES 4 B 115 MET TYR TRP PRO SER SER VAL PRO VAL GLN PRO GLU GLN SEQRES 5 B 115 LEU ALA SER ALA GLY PHE TYR TYR VAL GLY ARG ASN ASP SEQRES 6 B 115 ASP VAL LYS CYS PHE CYS CYS ASP GLY GLY LEU ARG CYS SEQRES 7 B 115 TRP GLU SER GLY ASP ASP PRO TRP VAL GLU HIS ALA LYS SEQRES 8 B 115 TRP PHE PRO ARG CYS GLU PHE LEU ILE ARG MET LYS GLY SEQRES 9 B 115 GLN GLU PHE VAL ASP GLU ILE GLN GLY ARG TYR HET ZN A 401 1 HET 2DY A 402 43 HET ZN B 401 1 HET 2DY B 402 43 HETNAM ZN ZINC ION HETNAM 2DY (3S,10AS)-2-[(2S)-2-CYCLOHEXYL-2-{[(2S)-2- HETNAM 2 2DY (METHYLAMINO)BUTANOYL]AMINO}ACETYL]-N-[(4R)-3,4- HETNAM 3 2DY DIHYDRO-2H-CHROMEN-4-YL]-1,2,3,4,10,10A- HETNAM 4 2DY HEXAHYDROPYRAZINO[1,2-A]INDOLE-3-CARBOXAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 2DY 2(C34 H45 N5 O4) FORMUL 7 HOH *133(H2 O) HELIX 1 1 ASN A 257 GLN A 261 5 5 HELIX 2 2 THR A 262 THR A 269 1 8 HELIX 3 3 GLN A 280 ALA A 287 1 8 HELIX 4 4 ASP A 315 PHE A 324 1 10 HELIX 5 5 CYS A 327 GLY A 335 1 9 HELIX 6 6 GLY A 335 GLN A 343 1 9 HELIX 7 7 ASN B 257 GLN B 261 5 5 HELIX 8 8 THR B 262 THR B 269 1 8 HELIX 9 9 PHE B 270 TRP B 273 5 4 HELIX 10 10 GLN B 280 ALA B 287 1 8 HELIX 11 11 ASP B 315 PHE B 324 1 10 HELIX 12 12 CYS B 327 GLY B 335 1 9 HELIX 13 13 GLY B 335 ARG B 345 1 11 SHEET 1 A 3 PHE A 289 TYR A 291 0 SHEET 2 A 3 VAL A 298 CYS A 300 -1 O LYS A 299 N TYR A 290 SHEET 3 A 3 GLY A 306 LEU A 307 -1 O LEU A 307 N VAL A 298 SHEET 1 B 3 PHE B 289 TYR B 291 0 SHEET 2 B 3 VAL B 298 CYS B 300 -1 O LYS B 299 N TYR B 290 SHEET 3 B 3 GLY B 306 LEU B 307 -1 O LEU B 307 N VAL B 298 LINK SG CYS A 300 ZN ZN A 401 1555 1555 2.35 LINK SG CYS A 303 ZN ZN A 401 1555 1555 2.35 LINK NE2 HIS A 320 ZN ZN A 401 1555 1555 2.12 LINK SG CYS A 327 ZN ZN A 401 1555 1555 2.29 LINK SG CYS B 300 ZN ZN B 401 1555 1555 2.28 LINK SG CYS B 303 ZN ZN B 401 1555 1555 2.34 LINK NE2 HIS B 320 ZN ZN B 401 1555 1555 2.09 LINK SG CYS B 327 ZN ZN B 401 1555 1555 2.31 SITE 1 AC1 4 CYS A 300 CYS A 303 HIS A 320 CYS A 327 SITE 1 AC2 14 GLN A 261 ARG A 294 VAL A 298 GLY A 306 SITE 2 AC2 14 LEU A 307 ARG A 308 CYS A 309 GLU A 311 SITE 3 AC2 14 ASP A 314 GLU A 319 HOH A 514 HOH A 546 SITE 4 AC2 14 MET B 267 ARG B 268 SITE 1 AC3 4 CYS B 300 CYS B 303 HIS B 320 CYS B 327 SITE 1 AC4 10 VAL B 298 GLY B 306 LEU B 307 ARG B 308 SITE 2 AC4 10 CYS B 309 TRP B 310 GLU B 311 ASP B 314 SITE 3 AC4 10 GLU B 319 TRP B 323 CRYST1 30.982 68.320 121.622 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032277 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014637 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008222 0.00000