PDB Short entry for 4MXP HEADER PI(4)P-BINDING PROTEIN 26-SEP-13 4MXP TITLE STRUCTURAL BASIS FOR PI(4)P-SPECIFIC MEMBRANE RECRUITMENT OF THE TITLE 2 LEGIONELLA PNEUMOPHILA EFFECTOR DRRA/SIDM COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEFECTS IN RAB1 RECRUITMENT PROTEIN A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GEF AND P4M DOMAINS, UNP RESIDUES 330-647; COMPND 5 SYNONYM: MULTIFUNCTIONAL VIRULENCE EFFECTOR PROTEIN DRRA, ADENOSINE COMPND 6 MONOPHOSPHATE-PROTEIN TRANSFERASE, AMPYLATOR, GUANOSINE COMPND 7 MONOPHOSPHATE-PROTEIN TRANSFERASE, GMPYLATOR, RAB1 GUANINE NUCLEOTIDE COMPND 8 EXCHANGE FACTOR; COMPND 9 EC: 2.7.7.-; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 272624; SOURCE 4 STRAIN: PHILADELPHIA 1 / ATCC 33152 / DSM 7513; SOURCE 5 GENE: DRRA, LPG2464, SIDM; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-LIPID COMPLEX, GUANINE NUCLEOTIDE EXCHANGE FACTOR, RAB1 KEYWDS 2 BINDING, PI(4)P-BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.M.DEL CAMPO,A.K.MISHRA,Y.H.WANG,C.R.ROY,P.A.JANMEY,D.G.LAMBRIGHT REVDAT 3 20-SEP-23 4MXP 1 REMARK SEQADV LINK REVDAT 2 26-MAR-14 4MXP 1 JRNL REVDAT 1 19-MAR-14 4MXP 0 JRNL AUTH C.M.DEL CAMPO,A.K.MISHRA,Y.H.WANG,C.R.ROY,P.A.JANMEY, JRNL AUTH 2 D.G.LAMBRIGHT JRNL TITL STRUCTURAL BASIS FOR PI(4)P-SPECIFIC MEMBRANE RECRUITMENT OF JRNL TITL 2 THE LEGIONELLA PNEUMOPHILA EFFECTOR DRRA/SIDM. JRNL REF STRUCTURE V. 22 397 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 24530282 JRNL DOI 10.1016/J.STR.2013.12.018 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 38240 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1906 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.83 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.86 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2649 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2455 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 195 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.266 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2535 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2474 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3409 ; 1.220 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5740 ; 0.735 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 313 ; 4.922 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 113 ;35.410 ;25.752 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 507 ;13.085 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.709 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 385 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2802 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 522 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1243 ; 1.502 ; 2.442 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1242 ; 1.498 ; 2.440 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1553 ; 2.273 ; 3.656 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4MXP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082496. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : CHANNEL-CUT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38272 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3L0M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4-6% PEG 3350, 100 MM TRIS, 0.5 M REMARK 280 NACL, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 64.27600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 64.27600 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.61100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 64.27600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.30550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 64.27600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.91650 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 64.27600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.27600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 26.61100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 64.27600 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 39.91650 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 64.27600 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 13.30550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 320 REMARK 465 GLY A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 GLY A 328 REMARK 465 SER A 329 REMARK 465 ALA A 330 REMARK 465 LYS A 331 REMARK 465 ILE A 332 REMARK 465 ARG A 333 REMARK 465 GLU A 334 REMARK 465 LEU A 335 REMARK 465 GLY A 336 REMARK 465 LYS A 647 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 640 O HOH A 940 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 426 21.76 -140.61 REMARK 500 TRP A 486 -125.84 54.14 REMARK 500 ASN A 508 59.45 24.71 REMARK 500 ASP A 538 -156.71 -100.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 702 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 543 O REMARK 620 2 THR A 546 OG1 91.0 REMARK 620 3 HOH A 978 O 87.0 78.7 REMARK 620 4 HOH A 979 O 87.1 88.8 166.1 REMARK 620 5 HOH A 980 O 97.0 166.3 90.7 102.6 REMARK 620 6 HOH A 981 O 169.0 87.2 103.2 82.1 87.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DB4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 702 DBREF 4MXP A 330 647 UNP Q5ZSQ3 DRRA_LEGPH 330 647 SEQADV 4MXP MET A 320 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP GLY A 321 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP HIS A 322 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP HIS A 323 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP HIS A 324 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP HIS A 325 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP HIS A 326 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP HIS A 327 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP GLY A 328 UNP Q5ZSQ3 EXPRESSION TAG SEQADV 4MXP SER A 329 UNP Q5ZSQ3 EXPRESSION TAG SEQRES 1 A 328 MET GLY HIS HIS HIS HIS HIS HIS GLY SER ALA LYS ILE SEQRES 2 A 328 ARG GLU LEU GLY VAL GLN ARG VAL THR ARG ILE GLU ASN SEQRES 3 A 328 LEU GLU ASN ALA LYS LYS LEU TRP ASP ASN ALA ASN SER SEQRES 4 A 328 MET LEU GLU LYS GLY ASN ILE SER GLY TYR LEU LYS ALA SEQRES 5 A 328 ALA ASN GLU LEU HIS LYS PHE MET LYS GLU LYS ASN LEU SEQRES 6 A 328 LYS GLU ASP ASP LEU ARG PRO GLU LEU SER ASP LYS THR SEQRES 7 A 328 ILE SER PRO LYS GLY TYR ALA ILE LEU GLN SER LEU TRP SEQRES 8 A 328 GLY ALA ALA SER ASP TYR SER ARG ALA ALA ALA THR LEU SEQRES 9 A 328 THR GLU SER THR VAL GLU PRO GLY LEU VAL SER ALA VAL SEQRES 10 A 328 ASN LYS MET SER ALA PHE PHE MET ASP CYS LYS LEU SER SEQRES 11 A 328 PRO ASN GLU ARG ALA THR PRO ASP PRO ASP PHE LYS VAL SEQRES 12 A 328 GLY LYS SER LYS ILE LEU VAL GLY ILE MET GLN PHE ILE SEQRES 13 A 328 LYS ASP VAL ALA ASP PRO THR SER LYS ILE TRP MET HIS SEQRES 14 A 328 ASN THR LYS ALA LEU MET ASN HIS LYS ILE ALA ALA ILE SEQRES 15 A 328 GLN LYS LEU GLU ARG SER ASN ASN VAL ASN ASP GLU THR SEQRES 16 A 328 LEU GLU SER VAL LEU SER SER LYS GLY GLU ASN LEU SER SEQRES 17 A 328 GLU TYR LEU SER TYR LYS TYR ALA THR LYS ASP GLU GLY SEQRES 18 A 328 ARG GLU HIS ARG TYR THR ALA SER THR GLU ASN PHE LYS SEQRES 19 A 328 ASN VAL LYS GLU LYS TYR GLN GLN MET ARG GLY ASP ALA SEQRES 20 A 328 LEU LYS THR GLU ILE LEU ALA ASP PHE LYS ASP LYS LEU SEQRES 21 A 328 ALA GLU ALA THR ASP GLU GLN SER LEU LYS GLN ILE VAL SEQRES 22 A 328 ALA GLU LEU LYS SER LYS ASP GLU TYR ARG ILE LEU ALA SEQRES 23 A 328 LYS GLY GLN GLY LEU THR THR GLN LEU LEU GLY LEU LYS SEQRES 24 A 328 THR SER SER VAL SER SER PHE GLU LYS MET VAL GLU GLU SEQRES 25 A 328 THR ARG GLU SER ILE LYS SER GLN GLU ARG GLN THR ILE SEQRES 26 A 328 LYS ILE LYS HET DB4 A 701 35 HET NA A 702 1 HETNAM DB4 (2R)-3-{[(R)-HYDROXY{[(1R,2R,3R,4R,5S,6R)-2,3,5,6- HETNAM 2 DB4 TETRAHYDROXY-4-(PHOSPHONOOXY) HETNAM 3 DB4 CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1,2-DIYL HETNAM 4 DB4 DIBUTANOATE HETNAM NA SODIUM ION FORMUL 2 DB4 C17 H32 O16 P2 FORMUL 3 NA NA 1+ FORMUL 4 HOH *195(H2 O) HELIX 1 1 GLN A 338 LYS A 362 1 25 HELIX 2 2 ASN A 364 LYS A 382 1 19 HELIX 3 3 LYS A 385 ARG A 390 1 6 HELIX 4 4 PRO A 391 SER A 394 5 4 HELIX 5 5 SER A 399 ALA A 420 1 22 HELIX 6 6 THR A 427 LEU A 448 1 22 HELIX 7 7 GLY A 463 ALA A 479 1 17 HELIX 8 8 THR A 490 SER A 507 1 18 HELIX 9 9 ASN A 511 SER A 521 1 11 HELIX 10 10 ASN A 525 LEU A 530 1 6 HELIX 11 11 LYS A 556 GLN A 560 5 5 HELIX 12 12 ARG A 563 ALA A 580 1 18 HELIX 13 13 ASP A 584 SER A 597 1 14 HELIX 14 14 LYS A 598 LYS A 606 1 9 HELIX 15 15 GLY A 609 GLY A 616 1 8 HELIX 16 16 THR A 619 ILE A 646 1 28 SHEET 1 A 2 LYS A 484 ILE A 485 0 SHEET 2 A 2 HIS A 488 ASN A 489 -1 O HIS A 488 N ILE A 485 LINK O HIS A 543 NA NA A 702 1555 1555 2.29 LINK OG1 THR A 546 NA NA A 702 1555 1555 2.53 LINK NA NA A 702 O HOH A 978 1555 1555 2.55 LINK NA NA A 702 O HOH A 979 1555 1555 2.37 LINK NA NA A 702 O HOH A 980 1555 1555 2.38 LINK NA NA A 702 O HOH A 981 1555 1555 2.57 SITE 1 AC1 21 ASN A 373 LYS A 377 LYS A 380 TYR A 532 SITE 2 AC1 21 TYR A 534 ARG A 541 HIS A 543 LYS A 568 SITE 3 AC1 21 GLY A 607 GLN A 608 GLY A 609 THR A 611 SITE 4 AC1 21 THR A 612 LEU A 617 THR A 619 SER A 620 SITE 5 AC1 21 SER A 621 HOH A 823 HOH A 831 HOH A 836 SITE 6 AC1 21 HOH A 948 SITE 1 AC2 6 HIS A 543 THR A 546 HOH A 978 HOH A 979 SITE 2 AC2 6 HOH A 980 HOH A 981 CRYST1 128.552 128.552 53.222 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007779 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018789 0.00000