PDB Short entry for 4N35 HEADER SUGAR BINDING PROTEIN 06-OCT-13 4N35 TITLE STRUCTURE OF LANGERIN CRD I313 COMPLEXED WITH GLCNAC-BETA1-3GAL-BETA1- TITLE 2 4GLC-BETA-CH2CH2N3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER K; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: CARBOHYDRATE RECOGNITION DOMAIN; COMPND 5 SYNONYM: LANGERIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD207, CLEC4K; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CRD CARBOHYDRATE COMPLEX, CARBOHYDRATE-RECOGNITION DOMAIN, C-TYPE KEYWDS 2 LECTIN ON LANGERHANS CELLS, CARBOHYDRATE/SUGAR BINDING, RECEPTOR ON KEYWDS 3 LANGERHANS CELLS, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.FEINBERG,T.J.W.ROWNTREE,S.L.W.TAN,K.DRICKAMER,W.I.WEIS,M.E.TAYLOR REVDAT 6 20-SEP-23 4N35 1 HETSYN REVDAT 5 29-JUL-20 4N35 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 15-NOV-17 4N35 1 REMARK REVDAT 3 22-JAN-14 4N35 1 JRNL REVDAT 2 04-DEC-13 4N35 1 JRNL REVDAT 1 20-NOV-13 4N35 0 JRNL AUTH H.FEINBERG,T.J.ROWNTREE,S.L.TAN,K.DRICKAMER,W.I.WEIS, JRNL AUTH 2 M.E.TAYLOR JRNL TITL COMMON POLYMORPHISMS IN HUMAN LANGERIN CHANGE SPECIFICITY JRNL TITL 2 FOR GLYCAN LIGANDS. JRNL REF J.BIOL.CHEM. V. 288 36762 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 24217250 JRNL DOI 10.1074/JBC.M113.528000 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 47983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.5895 - 4.7526 0.99 2768 151 0.1530 0.1658 REMARK 3 2 4.7526 - 3.7736 1.00 2725 152 0.1269 0.1596 REMARK 3 3 3.7736 - 3.2970 1.00 2769 119 0.1546 0.1870 REMARK 3 4 3.2970 - 2.9957 0.99 2736 151 0.1735 0.2230 REMARK 3 5 2.9957 - 2.7811 1.00 2696 121 0.1809 0.2242 REMARK 3 6 2.7811 - 2.6172 1.00 2728 146 0.1736 0.2298 REMARK 3 7 2.6172 - 2.4861 1.00 2710 140 0.1722 0.2506 REMARK 3 8 2.4861 - 2.3779 1.00 2765 134 0.1828 0.2572 REMARK 3 9 2.3779 - 2.2864 1.00 2704 158 0.1834 0.2409 REMARK 3 10 2.2864 - 2.2075 1.00 2679 141 0.1778 0.2567 REMARK 3 11 2.2075 - 2.1385 1.00 2735 147 0.1737 0.2000 REMARK 3 12 2.1385 - 2.0774 1.00 2695 144 0.1780 0.2485 REMARK 3 13 2.0774 - 2.0227 1.00 2709 162 0.1768 0.2344 REMARK 3 14 2.0227 - 1.9734 1.00 2719 145 0.1794 0.2171 REMARK 3 15 1.9734 - 1.9285 1.00 2686 155 0.1887 0.2555 REMARK 3 16 1.9285 - 1.8875 1.00 2688 159 0.1890 0.2685 REMARK 3 17 1.8875 - 1.8497 0.75 2033 113 0.2044 0.2524 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4567 REMARK 3 ANGLE : 1.103 6191 REMARK 3 CHIRALITY : 0.084 640 REMARK 3 PLANARITY : 0.005 771 REMARK 3 DIHEDRAL : 21.697 1630 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N35 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : NA REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48723 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 36.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 30.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.16600 REMARK 200 R SYM FOR SHELL (I) : 0.16600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3P5G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 2.3-4.0 MG/ML REMARK 280 LANGERIN, 2.5 MM CACL2, 10-100 MM TRIS (PH 8.0), 25 MM NACL AND REMARK 280 15MM TR54. THE RESERVOIR SOLUTION CONTAINED 0.1 M HEPES (PH 7.0), REMARK 280 0.1-0.2 M MGCL2, AND 20-35% POLYETHYLENE GLYCOL 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.96500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.96500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, F, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 193 REMARK 465 VAL A 194 REMARK 465 VAL A 195 REMARK 465 SER A 196 REMARK 465 GLN A 197 REMARK 465 SER A 326 REMARK 465 GLU A 327 REMARK 465 PRO A 328 REMARK 465 GLN B 193 REMARK 465 VAL B 194 REMARK 465 VAL B 195 REMARK 465 SER B 196 REMARK 465 GLN B 197 REMARK 465 SER B 326 REMARK 465 GLU B 327 REMARK 465 PRO B 328 REMARK 465 GLN C 193 REMARK 465 VAL C 194 REMARK 465 VAL C 195 REMARK 465 SER C 326 REMARK 465 GLU C 327 REMARK 465 PRO C 328 REMARK 465 GLN D 193 REMARK 465 VAL D 194 REMARK 465 VAL D 195 REMARK 465 SER D 196 REMARK 465 PRO D 325 REMARK 465 SER D 326 REMARK 465 GLU D 327 REMARK 465 PRO D 328 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 646 O HOH D 665 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 292 33.31 -144.89 REMARK 500 ASN C 292 31.39 -143.13 REMARK 500 ASN D 292 28.84 -140.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 285 OE1 REMARK 620 2 ASN A 287 OD1 75.8 REMARK 620 3 GLU A 293 OE1 146.2 75.2 REMARK 620 4 ASN A 307 OD1 67.7 142.0 142.8 REMARK 620 5 ASP A 308 OD1 71.1 88.9 91.6 88.9 REMARK 620 6 ASP A 308 O 127.6 142.1 71.3 72.9 75.1 REMARK 620 7 NAG E 3 O4 80.0 73.3 107.4 90.1 149.1 133.6 REMARK 620 8 NAG E 3 O3 140.0 116.8 70.1 86.8 141.5 67.1 69.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 285 OE1 REMARK 620 2 ASN B 287 OD1 72.8 REMARK 620 3 GLU B 293 OE1 145.0 77.2 REMARK 620 4 ASN B 307 OD1 66.6 138.2 144.4 REMARK 620 5 ASP B 308 OD1 71.9 88.8 90.1 87.7 REMARK 620 6 ASP B 308 O 128.2 140.9 69.4 76.1 71.9 REMARK 620 7 NAG F 3 O3 136.9 122.3 75.3 84.0 140.2 68.3 REMARK 620 8 NAG F 3 O4 78.9 75.1 110.4 87.8 149.8 135.3 68.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 285 OE1 REMARK 620 2 ASN C 287 OD1 71.7 REMARK 620 3 GLU C 293 OE1 142.2 75.3 REMARK 620 4 ASN C 307 OD1 70.4 140.5 144.2 REMARK 620 5 ASP C 308 OD1 72.0 87.4 88.8 91.1 REMARK 620 6 ASP C 308 O 129.5 138.7 69.3 76.7 71.5 REMARK 620 7 NAG G 2 O4 76.4 78.2 114.4 82.6 148.0 135.9 REMARK 620 8 NAG G 2 O3 139.0 116.7 73.4 86.2 143.8 72.8 67.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 285 OE1 REMARK 620 2 ASN D 287 OD1 73.2 REMARK 620 3 GLU D 293 OE1 144.4 74.8 REMARK 620 4 ASN D 307 OD1 67.5 139.3 145.9 REMARK 620 5 ASP D 308 OD1 70.8 85.6 91.7 90.8 REMARK 620 6 ASP D 308 O 130.6 139.8 70.2 77.3 76.4 REMARK 620 7 NAG H 3 O4 75.6 76.1 111.2 84.5 145.2 135.2 REMARK 620 8 NAG H 3 O3 137.0 117.2 72.8 86.7 146.3 70.3 68.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4N32 RELATED DB: PDB REMARK 900 RELATED ID: 4N33 RELATED DB: PDB REMARK 900 RELATED ID: 4N34 RELATED DB: PDB REMARK 900 RELATED ID: 4N36 RELATED DB: PDB REMARK 900 RELATED ID: 4N37 RELATED DB: PDB REMARK 900 RELATED ID: 4N38 RELATED DB: PDB DBREF 4N35 A 193 328 UNP Q9UJ71 CLC4K_HUMAN 193 328 DBREF 4N35 B 193 328 UNP Q9UJ71 CLC4K_HUMAN 193 328 DBREF 4N35 C 193 328 UNP Q9UJ71 CLC4K_HUMAN 193 328 DBREF 4N35 D 193 328 UNP Q9UJ71 CLC4K_HUMAN 193 328 SEQADV 4N35 ALA A 278 UNP Q9UJ71 VAL 278 VARIANT SEQADV 4N35 ILE A 313 UNP Q9UJ71 LYS 313 ENGINEERED MUTATION SEQADV 4N35 ALA B 278 UNP Q9UJ71 VAL 278 VARIANT SEQADV 4N35 ILE B 313 UNP Q9UJ71 LYS 313 ENGINEERED MUTATION SEQADV 4N35 ALA C 278 UNP Q9UJ71 VAL 278 VARIANT SEQADV 4N35 ILE C 313 UNP Q9UJ71 LYS 313 ENGINEERED MUTATION SEQADV 4N35 ALA D 278 UNP Q9UJ71 VAL 278 VARIANT SEQADV 4N35 ILE D 313 UNP Q9UJ71 LYS 313 ENGINEERED MUTATION SEQRES 1 A 136 GLN VAL VAL SER GLN GLY TRP LYS TYR PHE LYS GLY ASN SEQRES 2 A 136 PHE TYR TYR PHE SER LEU ILE PRO LYS THR TRP TYR SER SEQRES 3 A 136 ALA GLU GLN PHE CYS VAL SER ARG ASN SER HIS LEU THR SEQRES 4 A 136 SER VAL THR SER GLU SER GLU GLN GLU PHE LEU TYR LYS SEQRES 5 A 136 THR ALA GLY GLY LEU ILE TYR TRP ILE GLY LEU THR LYS SEQRES 6 A 136 ALA GLY MET GLU GLY ASP TRP SER TRP VAL ASP ASP THR SEQRES 7 A 136 PRO PHE ASN LYS VAL GLN SER ALA ARG PHE TRP ILE PRO SEQRES 8 A 136 GLY GLU PRO ASN ASN ALA GLY ASN ASN GLU HIS CYS GLY SEQRES 9 A 136 ASN ILE LYS ALA PRO SER LEU GLN ALA TRP ASN ASP ALA SEQRES 10 A 136 PRO CYS ASP ILE THR PHE LEU PHE ILE CYS LYS ARG PRO SEQRES 11 A 136 TYR VAL PRO SER GLU PRO SEQRES 1 B 136 GLN VAL VAL SER GLN GLY TRP LYS TYR PHE LYS GLY ASN SEQRES 2 B 136 PHE TYR TYR PHE SER LEU ILE PRO LYS THR TRP TYR SER SEQRES 3 B 136 ALA GLU GLN PHE CYS VAL SER ARG ASN SER HIS LEU THR SEQRES 4 B 136 SER VAL THR SER GLU SER GLU GLN GLU PHE LEU TYR LYS SEQRES 5 B 136 THR ALA GLY GLY LEU ILE TYR TRP ILE GLY LEU THR LYS SEQRES 6 B 136 ALA GLY MET GLU GLY ASP TRP SER TRP VAL ASP ASP THR SEQRES 7 B 136 PRO PHE ASN LYS VAL GLN SER ALA ARG PHE TRP ILE PRO SEQRES 8 B 136 GLY GLU PRO ASN ASN ALA GLY ASN ASN GLU HIS CYS GLY SEQRES 9 B 136 ASN ILE LYS ALA PRO SER LEU GLN ALA TRP ASN ASP ALA SEQRES 10 B 136 PRO CYS ASP ILE THR PHE LEU PHE ILE CYS LYS ARG PRO SEQRES 11 B 136 TYR VAL PRO SER GLU PRO SEQRES 1 C 136 GLN VAL VAL SER GLN GLY TRP LYS TYR PHE LYS GLY ASN SEQRES 2 C 136 PHE TYR TYR PHE SER LEU ILE PRO LYS THR TRP TYR SER SEQRES 3 C 136 ALA GLU GLN PHE CYS VAL SER ARG ASN SER HIS LEU THR SEQRES 4 C 136 SER VAL THR SER GLU SER GLU GLN GLU PHE LEU TYR LYS SEQRES 5 C 136 THR ALA GLY GLY LEU ILE TYR TRP ILE GLY LEU THR LYS SEQRES 6 C 136 ALA GLY MET GLU GLY ASP TRP SER TRP VAL ASP ASP THR SEQRES 7 C 136 PRO PHE ASN LYS VAL GLN SER ALA ARG PHE TRP ILE PRO SEQRES 8 C 136 GLY GLU PRO ASN ASN ALA GLY ASN ASN GLU HIS CYS GLY SEQRES 9 C 136 ASN ILE LYS ALA PRO SER LEU GLN ALA TRP ASN ASP ALA SEQRES 10 C 136 PRO CYS ASP ILE THR PHE LEU PHE ILE CYS LYS ARG PRO SEQRES 11 C 136 TYR VAL PRO SER GLU PRO SEQRES 1 D 136 GLN VAL VAL SER GLN GLY TRP LYS TYR PHE LYS GLY ASN SEQRES 2 D 136 PHE TYR TYR PHE SER LEU ILE PRO LYS THR TRP TYR SER SEQRES 3 D 136 ALA GLU GLN PHE CYS VAL SER ARG ASN SER HIS LEU THR SEQRES 4 D 136 SER VAL THR SER GLU SER GLU GLN GLU PHE LEU TYR LYS SEQRES 5 D 136 THR ALA GLY GLY LEU ILE TYR TRP ILE GLY LEU THR LYS SEQRES 6 D 136 ALA GLY MET GLU GLY ASP TRP SER TRP VAL ASP ASP THR SEQRES 7 D 136 PRO PHE ASN LYS VAL GLN SER ALA ARG PHE TRP ILE PRO SEQRES 8 D 136 GLY GLU PRO ASN ASN ALA GLY ASN ASN GLU HIS CYS GLY SEQRES 9 D 136 ASN ILE LYS ALA PRO SER LEU GLN ALA TRP ASN ASP ALA SEQRES 10 D 136 PRO CYS ASP ILE THR PHE LEU PHE ILE CYS LYS ARG PRO SEQRES 11 D 136 TYR VAL PRO SER GLU PRO HET BGC E 1 12 HET GAL E 2 11 HET NAG E 3 14 HET BGC F 1 12 HET GAL F 2 11 HET NAG F 3 14 HET GAL G 1 12 HET NAG G 2 14 HET BGC H 1 12 HET GAL H 2 11 HET NAG H 3 14 HET CA A 404 1 HET CA B 404 1 HET CA C 403 1 HET CA D 404 1 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 BGC 3(C6 H12 O6) FORMUL 5 GAL 4(C6 H12 O6) FORMUL 5 NAG 4(C8 H15 N O6) FORMUL 9 CA 4(CA 2+) FORMUL 13 HOH *591(H2 O) HELIX 1 1 THR A 215 ARG A 226 1 12 HELIX 2 2 SER A 235 GLY A 247 1 13 HELIX 3 3 ASN A 273 ALA A 278 1 6 HELIX 4 4 ARG A 279 TRP A 281 5 3 HELIX 5 5 ASN A 288 ASN A 292 5 5 HELIX 6 6 THR B 215 ARG B 226 1 12 HELIX 7 7 SER B 235 GLY B 247 1 13 HELIX 8 8 ASN B 273 ALA B 278 1 6 HELIX 9 9 ARG B 279 TRP B 281 5 3 HELIX 10 10 ASN B 288 ASN B 292 5 5 HELIX 11 11 THR C 215 ARG C 226 1 12 HELIX 12 12 SER C 235 GLY C 247 1 13 HELIX 13 13 ASN C 273 ALA C 278 1 6 HELIX 14 14 ARG C 279 TRP C 281 5 3 HELIX 15 15 ASN C 288 ASN C 292 5 5 HELIX 16 16 THR D 215 ARG D 226 1 12 HELIX 17 17 SER D 235 GLY D 247 1 13 HELIX 18 18 ASN D 273 ALA D 278 1 6 HELIX 19 19 ARG D 279 TRP D 281 5 3 HELIX 20 20 ASN D 288 ASN D 292 5 5 SHEET 1 A 5 LYS A 200 PHE A 202 0 SHEET 2 A 5 ASN A 205 PHE A 209 -1 O ASN A 205 N PHE A 202 SHEET 3 A 5 LEU A 316 PRO A 322 -1 O ARG A 321 N PHE A 206 SHEET 4 A 5 TYR A 251 ALA A 258 1 N TRP A 252 O LEU A 316 SHEET 5 A 5 ASP A 263 TRP A 266 -1 O ASP A 263 N ALA A 258 SHEET 1 B 5 HIS A 229 LEU A 230 0 SHEET 2 B 5 LEU A 316 PRO A 322 -1 O LYS A 320 N HIS A 229 SHEET 3 B 5 TYR A 251 ALA A 258 1 N TRP A 252 O LEU A 316 SHEET 4 B 5 CYS A 295 ILE A 298 -1 O ILE A 298 N TYR A 251 SHEET 5 B 5 TRP A 306 ALA A 309 -1 O ASN A 307 N ASN A 297 SHEET 1 C 5 LYS B 200 PHE B 202 0 SHEET 2 C 5 ASN B 205 PHE B 209 -1 O TYR B 207 N LYS B 200 SHEET 3 C 5 LEU B 316 PRO B 322 -1 O ARG B 321 N PHE B 206 SHEET 4 C 5 TYR B 251 ALA B 258 1 N TRP B 252 O LEU B 316 SHEET 5 C 5 ASP B 263 TRP B 266 -1 O SER B 265 N THR B 256 SHEET 1 D 5 HIS B 229 LEU B 230 0 SHEET 2 D 5 LEU B 316 PRO B 322 -1 O LYS B 320 N HIS B 229 SHEET 3 D 5 TYR B 251 ALA B 258 1 N TRP B 252 O LEU B 316 SHEET 4 D 5 CYS B 295 ILE B 298 -1 O ILE B 298 N TYR B 251 SHEET 5 D 5 TRP B 306 ALA B 309 -1 O ASN B 307 N ASN B 297 SHEET 1 E 5 TRP C 199 PHE C 202 0 SHEET 2 E 5 ASN C 205 PHE C 209 -1 O TYR C 207 N LYS C 200 SHEET 3 E 5 LEU C 316 PRO C 322 -1 O ARG C 321 N PHE C 206 SHEET 4 E 5 TYR C 251 ALA C 258 1 N TRP C 252 O LEU C 316 SHEET 5 E 5 ASP C 263 TRP C 266 -1 O ASP C 263 N ALA C 258 SHEET 1 F 5 HIS C 229 LEU C 230 0 SHEET 2 F 5 LEU C 316 PRO C 322 -1 O LYS C 320 N HIS C 229 SHEET 3 F 5 TYR C 251 ALA C 258 1 N TRP C 252 O LEU C 316 SHEET 4 F 5 CYS C 295 ILE C 298 -1 O ILE C 298 N TYR C 251 SHEET 5 F 5 TRP C 306 ALA C 309 -1 O ASN C 307 N ASN C 297 SHEET 1 G 5 LYS D 200 PHE D 202 0 SHEET 2 G 5 ASN D 205 PHE D 209 -1 O TYR D 207 N LYS D 200 SHEET 3 G 5 LEU D 316 PRO D 322 -1 O ARG D 321 N PHE D 206 SHEET 4 G 5 TYR D 251 ALA D 258 1 N TRP D 252 O LEU D 316 SHEET 5 G 5 ASP D 263 TRP D 266 -1 O SER D 265 N THR D 256 SHEET 1 H 5 HIS D 229 LEU D 230 0 SHEET 2 H 5 LEU D 316 PRO D 322 -1 O LYS D 320 N HIS D 229 SHEET 3 H 5 TYR D 251 ALA D 258 1 N TRP D 252 O LEU D 316 SHEET 4 H 5 CYS D 295 ILE D 298 -1 O ILE D 298 N TYR D 251 SHEET 5 H 5 TRP D 306 ALA D 309 -1 O ALA D 309 N CYS D 295 SSBOND 1 CYS A 223 CYS A 319 1555 1555 2.06 SSBOND 2 CYS A 295 CYS A 311 1555 1555 2.06 SSBOND 3 CYS B 223 CYS B 319 1555 1555 2.05 SSBOND 4 CYS B 295 CYS B 311 1555 1555 2.07 SSBOND 5 CYS C 223 CYS C 319 1555 1555 2.06 SSBOND 6 CYS C 295 CYS C 311 1555 1555 2.05 SSBOND 7 CYS D 223 CYS D 319 1555 1555 2.05 SSBOND 8 CYS D 295 CYS D 311 1555 1555 2.07 LINK O4 BGC E 1 C1 GAL E 2 1555 1555 1.44 LINK O3 GAL E 2 C1 NAG E 3 1555 1555 1.43 LINK O4 BGC F 1 C1 GAL F 2 1555 1555 1.44 LINK O3 GAL F 2 C1 NAG F 3 1555 1555 1.44 LINK O3 GAL G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 BGC H 1 C1 GAL H 2 1555 1555 1.44 LINK O3 GAL H 2 C1 NAG H 3 1555 1555 1.43 LINK OE1 GLU A 285 CA CA A 404 1555 1555 2.46 LINK OD1 ASN A 287 CA CA A 404 1555 1555 2.49 LINK OE1 GLU A 293 CA CA A 404 1555 1555 2.40 LINK OD1 ASN A 307 CA CA A 404 1555 1555 2.43 LINK OD1 ASP A 308 CA CA A 404 1555 1555 2.41 LINK O ASP A 308 CA CA A 404 1555 1555 2.45 LINK CA CA A 404 O4 NAG E 3 1555 1555 2.46 LINK CA CA A 404 O3 NAG E 3 1555 1555 2.58 LINK OE1 GLU B 285 CA CA B 404 1555 1555 2.48 LINK OD1 ASN B 287 CA CA B 404 1555 1555 2.44 LINK OE1 GLU B 293 CA CA B 404 1555 1555 2.42 LINK OD1 ASN B 307 CA CA B 404 1555 1555 2.47 LINK OD1 ASP B 308 CA CA B 404 1555 1555 2.44 LINK O ASP B 308 CA CA B 404 1555 1555 2.49 LINK CA CA B 404 O3 NAG F 3 1555 1555 2.52 LINK CA CA B 404 O4 NAG F 3 1555 1555 2.53 LINK OE1 GLU C 285 CA CA C 403 1555 1555 2.47 LINK OD1 ASN C 287 CA CA C 403 1555 1555 2.42 LINK OE1 GLU C 293 CA CA C 403 1555 1555 2.42 LINK OD1 ASN C 307 CA CA C 403 1555 1555 2.44 LINK OD1 ASP C 308 CA CA C 403 1555 1555 2.41 LINK O ASP C 308 CA CA C 403 1555 1555 2.50 LINK CA CA C 403 O4 NAG G 2 1555 1555 2.53 LINK CA CA C 403 O3 NAG G 2 1555 1555 2.57 LINK OE1 GLU D 285 CA CA D 404 1555 1555 2.50 LINK OD1 ASN D 287 CA CA D 404 1555 1555 2.45 LINK OE1 GLU D 293 CA CA D 404 1555 1555 2.41 LINK OD1 ASN D 307 CA CA D 404 1555 1555 2.43 LINK OD1 ASP D 308 CA CA D 404 1555 1555 2.42 LINK O ASP D 308 CA CA D 404 1555 1555 2.50 LINK CA CA D 404 O4 NAG H 3 1555 1555 2.52 LINK CA CA D 404 O3 NAG H 3 1555 1555 2.59 CISPEP 1 GLU A 285 PRO A 286 0 -4.35 CISPEP 2 GLU B 285 PRO B 286 0 -2.30 CISPEP 3 GLU C 285 PRO C 286 0 -4.27 CISPEP 4 GLU D 285 PRO D 286 0 -1.43 CRYST1 79.490 79.490 91.930 90.00 90.00 90.00 P 42 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012580 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012580 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010878 0.00000