PDB Short entry for 4NQD HEADER IMMUNE SYSTEM 25-NOV-13 4NQD TITLE CRYSTAL STRUCTURE OF TCR-MR1 TERNARY COMPLEX AND NON-COVALENTLY BOUND TITLE 2 5-(2-OXOPROPYLIDENEAMINO)-6-D-RIBITYLAMINOURACIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR HISTOCOMPATIBILITY COMPLEX CLASS I-RELATED GENE COMPND 3 PROTEIN; COMPND 4 CHAIN: A, C; COMPND 5 SYNONYM: MHC CLASS I-RELATED GENE PROTEIN, CLASS I HISTOCOMPATIBILITY COMPND 6 ANTIGEN-LIKE PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 10 CHAIN: B, F; COMPND 11 SYNONYM: BETA-2-MICROGLOBULIN FORM PI 5.3; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: TCR ALPHA CHAIN; COMPND 15 CHAIN: D, G; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: TCR BETA CHAIN; COMPND 19 CHAIN: E, H; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: B2M, BETA-2 MICROGLOBULIN, CDABP0092, HDCMA22P; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 GENE: TCR-ALPHA; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 21 MOL_ID: 4; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 GENE: TCR-BETA; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNE COMPLEX, MR1, T-CELL RECEPTOR, IG-DOMAIN, PROTEIN BINDING, KEYWDS 2 SCHIFF BASE, MEMBRANE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.W.BIRKINSHAW,J.ROSSJOHN REVDAT 3 19-NOV-14 4NQD 1 TITLE REVDAT 2 28-MAY-14 4NQD 1 JRNL REVDAT 1 16-APR-14 4NQD 0 JRNL AUTH A.J.CORBETT,S.B.ECKLE,R.W.BIRKINSHAW,L.LIU,O.PATEL,J.MAHONY, JRNL AUTH 2 Z.CHEN,R.REANTRAGOON,B.MEEHAN,H.CAO,N.A.WILLIAMSON, JRNL AUTH 3 R.A.STRUGNELL,D.VAN SINDEREN,J.Y.MAK,D.P.FAIRLIE, JRNL AUTH 4 L.KJER-NIELSEN,J.ROSSJOHN,J.MCCLUSKEY JRNL TITL T-CELL ACTIVATION BY TRANSITORY NEO-ANTIGENS DERIVED FROM JRNL TITL 2 DISTINCT MICROBIAL PATHWAYS. JRNL REF NATURE V. 509 361 2014 JRNL REFN ISSN 0028-0836 JRNL PMID 24695216 JRNL DOI 10.1038/NATURE13160 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 101214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 5109 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.26 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.69 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 7376 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2076 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7023 REMARK 3 BIN R VALUE (WORKING SET) : 0.2058 REMARK 3 BIN FREE R VALUE : 0.2436 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.79 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 353 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12482 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 545 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.80700 REMARK 3 B22 (A**2) : -8.66700 REMARK 3 B33 (A**2) : 6.85990 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.04750 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.255 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.208 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 12928 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 17607 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 5758 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 323 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1882 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 12928 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1648 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 14491 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.69 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.91 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-NOV-13. REMARK 100 THE RCSB ID CODE IS RCSB083524. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101222 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 9.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% (W/V) PEG3350, 0.2 M SODIUM REMARK 280 CITRATE, 0.1 M BIS-TRIS PROPANE, PH 6.3, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 107.79000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.43700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 107.79000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.43700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, H REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -177.98501 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -34.43700 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 277.20453 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 VAL A 222 REMARK 465 GLN A 223 REMARK 465 LEU A 246 REMARK 465 ASP A 247 REMARK 465 PRO A 248 REMARK 465 GLN A 249 REMARK 465 SER A 250 REMARK 465 SER A 251 REMARK 465 ASN A 252 REMARK 465 PRO A 270 REMARK 465 ARG B 97 REMARK 465 ASP B 98 REMARK 465 MET B 99 REMARK 465 HIS C 17 REMARK 465 GLY C 18 REMARK 465 LYS C 189 REMARK 465 GLU C 190 REMARK 465 THR C 191 REMARK 465 PHE C 192 REMARK 465 PRO C 193 REMARK 465 GLY C 194 REMARK 465 VAL C 195 REMARK 465 THR C 196 REMARK 465 GLY C 218 REMARK 465 GLU C 219 REMARK 465 GLU C 220 REMARK 465 ILE C 221 REMARK 465 VAL C 222 REMARK 465 GLN C 223 REMARK 465 GLU C 224 REMARK 465 LEU C 246 REMARK 465 ASP C 247 REMARK 465 PRO C 248 REMARK 465 GLN C 249 REMARK 465 SER C 250 REMARK 465 PRO C 270 REMARK 465 GLU D 201 REMARK 465 SER D 202 REMARK 465 SER D 203 REMARK 465 ASN E 1 REMARK 465 ASP E 245 REMARK 465 ASP F 98 REMARK 465 MET F 99 REMARK 465 SER G 124 REMARK 465 LYS G 125 REMARK 465 SER G 126 REMARK 465 SER G 127 REMARK 465 ASP G 128 REMARK 465 LYS G 129 REMARK 465 LYS G 147 REMARK 465 ASP G 148 REMARK 465 SER G 149 REMARK 465 PRO G 200 REMARK 465 GLU G 201 REMARK 465 SER G 202 REMARK 465 SER G 203 REMARK 465 ASN H 1 REMARK 465 ALA H 2 REMARK 465 ASP H 245 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 17 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 ASN A 134 CG OD1 ND2 REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 GLU A 219 CG CD OE1 OE2 REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 ILE A 221 CG1 CG2 CD1 REMARK 470 GLU A 224 CG CD OE1 OE2 REMARK 470 LEU A 253 CG CD1 CD2 REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 LYS C 43 CG CD CE NZ REMARK 470 ARG C 79 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 188 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 216 CG CD CE NZ REMARK 470 GLU C 245 CG CD OE1 OE2 REMARK 470 ASN C 252 CG OD1 ND2 REMARK 470 LEU C 253 CG CD1 CD2 REMARK 470 GLN D 112 CG CD OE1 NE2 REMARK 470 ARG D 122 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 145 CG CD OE1 NE2 REMARK 470 LYS D 147 CG CD CE NZ REMARK 470 ASP D 194 CG OD1 OD2 REMARK 470 LYS E 9 CG CD CE NZ REMARK 470 GLU E 116 CG CD OE1 OE2 REMARK 470 GLU E 133 CG CD OE1 OE2 REMARK 470 LYS E 165 CG CD CE NZ REMARK 470 GLU E 220 CG CD OE1 OE2 REMARK 470 GLU E 223 CG CD OE1 OE2 REMARK 470 ARG E 243 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 19 CG CD CE NZ REMARK 470 ASP F 34 CG OD1 OD2 REMARK 470 ARG F 45 CG CD NE CZ NH1 NH2 REMARK 470 GLU F 47 CG CD OE1 OE2 REMARK 470 LYS F 48 CG CD CE NZ REMARK 470 LYS F 75 CG CD CE NZ REMARK 470 GLU F 77 CG CD OE1 OE2 REMARK 470 GLN F 89 CG CD OE1 NE2 REMARK 470 LYS F 94 CG CD CE NZ REMARK 470 ARG F 97 CG CD NE CZ NH1 NH2 REMARK 470 GLN G 2 CG CD OE1 NE2 REMARK 470 GLN G 112 CG CD OE1 NE2 REMARK 470 ARG G 122 CG CD NE CZ NH1 NH2 REMARK 470 GLN G 140 CG CD OE1 NE2 REMARK 470 ASP G 150 CG OD1 OD2 REMARK 470 ARG G 162 CG CD NE CZ NH1 NH2 REMARK 470 LYS G 177 CG CD CE NZ REMARK 470 ASN G 188 CG OD1 ND2 REMARK 470 GLU G 193 CG CD OE1 OE2 REMARK 470 LYS H 14 CG CD CE NZ REMARK 470 GLU H 116 CG CD OE1 OE2 REMARK 470 LYS H 119 CG CD CE NZ REMARK 470 GLN H 140 CG CD OE1 NE2 REMARK 470 LYS H 165 CG CD CE NZ REMARK 470 ARG H 206 CG CD NE CZ NH1 NH2 REMARK 470 GLU H 220 CG CD OE1 OE2 REMARK 470 ASN H 221 CG OD1 ND2 REMARK 470 ASP H 227 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -128.08 59.48 REMARK 500 PHE A 119 -60.29 -132.98 REMARK 500 THR A 191 -96.86 -95.90 REMARK 500 GLU A 220 172.39 -50.60 REMARK 500 ASP C 29 -122.21 58.20 REMARK 500 PHE C 119 -55.56 -126.19 REMARK 500 THR C 175 -62.50 -90.32 REMARK 500 SER C 261 64.22 36.14 REMARK 500 GLN D 2 -70.20 -159.73 REMARK 500 VAL D 50 -33.03 -140.88 REMARK 500 LYS D 57 74.23 -161.07 REMARK 500 LYS F 48 48.04 -88.52 REMARK 500 TRP F 60 -1.72 82.22 REMARK 500 GLN G 2 -54.00 -121.19 REMARK 500 ALA G 16 -159.80 -92.66 REMARK 500 VAL G 50 -31.79 -135.49 REMARK 500 LYS G 57 78.72 -119.75 REMARK 500 PHE G 186 45.14 -107.48 REMARK 500 ASN H 70 -173.08 -172.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2LJ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2LJ C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NQC RELATED DB: PDB REMARK 900 RELATED ID: 4NQE RELATED DB: PDB REMARK 900 RELATED ID: 4L4V RELATED DB: PDB REMARK 900 RELATED ID: 4GUP RELATED DB: PDB DBREF 4NQD A 1 270 UNP Q95460 HMR1_HUMAN 23 292 DBREF 4NQD B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 4NQD C 1 270 UNP Q95460 HMR1_HUMAN 23 292 DBREF 4NQD F 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 4NQD D 1 203 PDB 4NQD 4NQD 1 203 DBREF 4NQD G 1 203 PDB 4NQD 4NQD 1 203 DBREF 4NQD E 1 245 PDB 4NQD 4NQD 1 245 DBREF 4NQD H 1 245 PDB 4NQD 4NQD 1 245 SEQADV 4NQD MET A 0 UNP Q95460 EXPRESSION TAG SEQADV 4NQD SER A 261 UNP Q95460 CYS 283 ENGINEERED MUTATION SEQADV 4NQD MET C 0 UNP Q95460 EXPRESSION TAG SEQADV 4NQD SER C 261 UNP Q95460 CYS 283 ENGINEERED MUTATION SEQRES 1 A 271 MET ARG THR HIS SER LEU ARG TYR PHE ARG LEU GLY VAL SEQRES 2 A 271 SER ASP PRO ILE HIS GLY VAL PRO GLU PHE ILE SER VAL SEQRES 3 A 271 GLY TYR VAL ASP SER HIS PRO ILE THR THR TYR ASP SER SEQRES 4 A 271 VAL THR ARG GLN LYS GLU PRO ARG ALA PRO TRP MET ALA SEQRES 5 A 271 GLU ASN LEU ALA PRO ASP HIS TRP GLU ARG TYR THR GLN SEQRES 6 A 271 LEU LEU ARG GLY TRP GLN GLN MET PHE LYS VAL GLU LEU SEQRES 7 A 271 LYS ARG LEU GLN ARG HIS TYR ASN HIS SER GLY SER HIS SEQRES 8 A 271 THR TYR GLN ARG MET ILE GLY CYS GLU LEU LEU GLU ASP SEQRES 9 A 271 GLY SER THR THR GLY PHE LEU GLN TYR ALA TYR ASP GLY SEQRES 10 A 271 GLN ASP PHE LEU ILE PHE ASN LYS ASP THR LEU SER TRP SEQRES 11 A 271 LEU ALA VAL ASP ASN VAL ALA HIS THR ILE LYS GLN ALA SEQRES 12 A 271 TRP GLU ALA ASN GLN HIS GLU LEU LEU TYR GLN LYS ASN SEQRES 13 A 271 TRP LEU GLU GLU GLU CYS ILE ALA TRP LEU LYS ARG PHE SEQRES 14 A 271 LEU GLU TYR GLY LYS ASP THR LEU GLN ARG THR GLU PRO SEQRES 15 A 271 PRO LEU VAL ARG VAL ASN ARG LYS GLU THR PHE PRO GLY SEQRES 16 A 271 VAL THR ALA LEU PHE CYS LYS ALA HIS GLY PHE TYR PRO SEQRES 17 A 271 PRO GLU ILE TYR MET THR TRP MET LYS ASN GLY GLU GLU SEQRES 18 A 271 ILE VAL GLN GLU ILE ASP TYR GLY ASP ILE LEU PRO SER SEQRES 19 A 271 GLY ASP GLY THR TYR GLN ALA TRP ALA SER ILE GLU LEU SEQRES 20 A 271 ASP PRO GLN SER SER ASN LEU TYR SER CYS HIS VAL GLU SEQRES 21 A 271 HIS SER GLY VAL HIS MET VAL LEU GLN VAL PRO SEQRES 1 B 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 B 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 B 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 B 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 B 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 B 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 B 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 B 99 ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 271 MET ARG THR HIS SER LEU ARG TYR PHE ARG LEU GLY VAL SEQRES 2 C 271 SER ASP PRO ILE HIS GLY VAL PRO GLU PHE ILE SER VAL SEQRES 3 C 271 GLY TYR VAL ASP SER HIS PRO ILE THR THR TYR ASP SER SEQRES 4 C 271 VAL THR ARG GLN LYS GLU PRO ARG ALA PRO TRP MET ALA SEQRES 5 C 271 GLU ASN LEU ALA PRO ASP HIS TRP GLU ARG TYR THR GLN SEQRES 6 C 271 LEU LEU ARG GLY TRP GLN GLN MET PHE LYS VAL GLU LEU SEQRES 7 C 271 LYS ARG LEU GLN ARG HIS TYR ASN HIS SER GLY SER HIS SEQRES 8 C 271 THR TYR GLN ARG MET ILE GLY CYS GLU LEU LEU GLU ASP SEQRES 9 C 271 GLY SER THR THR GLY PHE LEU GLN TYR ALA TYR ASP GLY SEQRES 10 C 271 GLN ASP PHE LEU ILE PHE ASN LYS ASP THR LEU SER TRP SEQRES 11 C 271 LEU ALA VAL ASP ASN VAL ALA HIS THR ILE LYS GLN ALA SEQRES 12 C 271 TRP GLU ALA ASN GLN HIS GLU LEU LEU TYR GLN LYS ASN SEQRES 13 C 271 TRP LEU GLU GLU GLU CYS ILE ALA TRP LEU LYS ARG PHE SEQRES 14 C 271 LEU GLU TYR GLY LYS ASP THR LEU GLN ARG THR GLU PRO SEQRES 15 C 271 PRO LEU VAL ARG VAL ASN ARG LYS GLU THR PHE PRO GLY SEQRES 16 C 271 VAL THR ALA LEU PHE CYS LYS ALA HIS GLY PHE TYR PRO SEQRES 17 C 271 PRO GLU ILE TYR MET THR TRP MET LYS ASN GLY GLU GLU SEQRES 18 C 271 ILE VAL GLN GLU ILE ASP TYR GLY ASP ILE LEU PRO SER SEQRES 19 C 271 GLY ASP GLY THR TYR GLN ALA TRP ALA SER ILE GLU LEU SEQRES 20 C 271 ASP PRO GLN SER SER ASN LEU TYR SER CYS HIS VAL GLU SEQRES 21 C 271 HIS SER GLY VAL HIS MET VAL LEU GLN VAL PRO SEQRES 1 D 203 GLY GLN ASN ILE ASP GLN PRO THR GLU MET THR ALA THR SEQRES 2 D 203 GLU GLY ALA ILE VAL GLN ILE ASN CYS THR TYR GLN THR SEQRES 3 D 203 SER GLY PHE ASN GLY LEU PHE TRP TYR GLN GLN HIS ALA SEQRES 4 D 203 GLY GLU ALA PRO THR PHE LEU SER TYR ASN VAL LEU ASP SEQRES 5 D 203 GLY LEU GLU GLU LYS GLY ARG PHE SER SER PHE LEU SER SEQRES 6 D 203 ARG SER LYS GLY TYR SER TYR LEU LEU LEU LYS GLU LEU SEQRES 7 D 203 GLN MET LYS ASP SER ALA SER TYR LEU CYS ALA VAL LYS SEQRES 8 D 203 ASP SER ASN TYR GLN LEU ILE TRP GLY ALA GLY THR LYS SEQRES 9 D 203 LEU ILE ILE LYS PRO ASP ILE GLN ASN PRO ASP PRO ALA SEQRES 10 D 203 VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP LYS SER SEQRES 11 D 203 VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR ASN VAL SEQRES 12 D 203 SER GLN SER LYS ASP SER ASP VAL TYR ILE THR ASP LYS SEQRES 13 D 203 CYS VAL LEU ASP MET ARG SER MET ASP PHE LYS SER ASN SEQRES 14 D 203 SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE ALA CYS SEQRES 15 D 203 ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU ASP THR SEQRES 16 D 203 PHE PHE PRO SER PRO GLU SER SER SEQRES 1 E 245 ASN ALA GLY VAL THR GLN THR PRO LYS PHE GLN VAL LEU SEQRES 2 E 245 LYS THR GLY GLN SER MET THR LEU GLN CYS ALA GLN ASP SEQRES 3 E 245 MET ASN HIS ASN SER MET TYR TRP TYR ARG GLN ASP PRO SEQRES 4 E 245 GLY MET GLY LEU ARG LEU ILE TYR TYR SER ALA SER GLU SEQRES 5 E 245 GLY THR THR ASP LYS GLY GLU VAL PRO ASN GLY TYR ASN SEQRES 6 E 245 VAL SER ARG LEU ASN LYS ARG GLU PHE SER LEU ARG LEU SEQRES 7 E 245 GLU SER ALA ALA PRO SER GLN THR SER VAL TYR PHE CYS SEQRES 8 E 245 ALA SER SER VAL TRP THR GLY GLU GLY SER GLY GLU LEU SEQRES 9 E 245 PHE PHE GLY GLU GLY SER ARG LEU THR VAL LEU GLU ASP SEQRES 10 E 245 LEU LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU SEQRES 11 E 245 PRO SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR SEQRES 12 E 245 LEU VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL SEQRES 13 E 245 GLU LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER SEQRES 14 E 245 GLY VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO SEQRES 15 E 245 ALA LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG LEU SEQRES 16 E 245 ARG VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS SEQRES 17 E 245 PHE ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN SEQRES 18 E 245 ASP GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN SEQRES 19 E 245 ILE VAL SER ALA GLU ALA TRP GLY ARG ALA ASP SEQRES 1 F 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 F 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 F 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 F 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 F 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 F 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 F 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 F 99 ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 G 203 GLY GLN ASN ILE ASP GLN PRO THR GLU MET THR ALA THR SEQRES 2 G 203 GLU GLY ALA ILE VAL GLN ILE ASN CYS THR TYR GLN THR SEQRES 3 G 203 SER GLY PHE ASN GLY LEU PHE TRP TYR GLN GLN HIS ALA SEQRES 4 G 203 GLY GLU ALA PRO THR PHE LEU SER TYR ASN VAL LEU ASP SEQRES 5 G 203 GLY LEU GLU GLU LYS GLY ARG PHE SER SER PHE LEU SER SEQRES 6 G 203 ARG SER LYS GLY TYR SER TYR LEU LEU LEU LYS GLU LEU SEQRES 7 G 203 GLN MET LYS ASP SER ALA SER TYR LEU CYS ALA VAL LYS SEQRES 8 G 203 ASP SER ASN TYR GLN LEU ILE TRP GLY ALA GLY THR LYS SEQRES 9 G 203 LEU ILE ILE LYS PRO ASP ILE GLN ASN PRO ASP PRO ALA SEQRES 10 G 203 VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP LYS SER SEQRES 11 G 203 VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR ASN VAL SEQRES 12 G 203 SER GLN SER LYS ASP SER ASP VAL TYR ILE THR ASP LYS SEQRES 13 G 203 CYS VAL LEU ASP MET ARG SER MET ASP PHE LYS SER ASN SEQRES 14 G 203 SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE ALA CYS SEQRES 15 G 203 ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU ASP THR SEQRES 16 G 203 PHE PHE PRO SER PRO GLU SER SER SEQRES 1 H 245 ASN ALA GLY VAL THR GLN THR PRO LYS PHE GLN VAL LEU SEQRES 2 H 245 LYS THR GLY GLN SER MET THR LEU GLN CYS ALA GLN ASP SEQRES 3 H 245 MET ASN HIS ASN SER MET TYR TRP TYR ARG GLN ASP PRO SEQRES 4 H 245 GLY MET GLY LEU ARG LEU ILE TYR TYR SER ALA SER GLU SEQRES 5 H 245 GLY THR THR ASP LYS GLY GLU VAL PRO ASN GLY TYR ASN SEQRES 6 H 245 VAL SER ARG LEU ASN LYS ARG GLU PHE SER LEU ARG LEU SEQRES 7 H 245 GLU SER ALA ALA PRO SER GLN THR SER VAL TYR PHE CYS SEQRES 8 H 245 ALA SER SER VAL TRP THR GLY GLU GLY SER GLY GLU LEU SEQRES 9 H 245 PHE PHE GLY GLU GLY SER ARG LEU THR VAL LEU GLU ASP SEQRES 10 H 245 LEU LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU SEQRES 11 H 245 PRO SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR SEQRES 12 H 245 LEU VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL SEQRES 13 H 245 GLU LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER SEQRES 14 H 245 GLY VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO SEQRES 15 H 245 ALA LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG LEU SEQRES 16 H 245 ARG VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS SEQRES 17 H 245 PHE ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN SEQRES 18 H 245 ASP GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN SEQRES 19 H 245 ILE VAL SER ALA GLU ALA TRP GLY ARG ALA ASP HET 2LJ A 301 23 HET 2LJ C 301 23 HET GOL D 301 6 HETNAM 2LJ 1-DEOXY-1-({2,6-DIOXO-5-[(E)-(2-OXOPROPYLIDENE)AMINO]- HETNAM 2 2LJ 1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL}AMINO)-D-RIBITOL HETNAM GOL GLYCEROL HETSYN 2LJ 5-(2-OXOPROPYLIDENEAMINO)-6-D-RIBITYLAMINOURACIL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 9 2LJ 2(C12 H18 N4 O7) FORMUL 11 GOL C3 H8 O3 FORMUL 12 HOH *545(H2 O) HELIX 1 1 ALA A 47 LEU A 54 1 8 HELIX 2 2 ALA A 55 ASN A 85 1 31 HELIX 3 3 ASP A 133 ALA A 145 1 13 HELIX 4 4 ASN A 146 GLU A 159 1 14 HELIX 5 5 GLU A 159 GLY A 172 1 14 HELIX 6 6 GLY A 172 GLN A 177 1 6 HELIX 7 7 ALA C 47 GLU C 52 1 6 HELIX 8 8 ALA C 55 ASN C 85 1 31 HELIX 9 9 ASP C 133 ALA C 145 1 13 HELIX 10 10 ASN C 146 GLU C 159 1 14 HELIX 11 11 GLU C 159 GLY C 172 1 14 HELIX 12 12 GLY C 172 GLN C 177 1 6 HELIX 13 13 GLN D 79 SER D 83 5 5 HELIX 14 14 ALA D 181 PHE D 186 1 6 HELIX 15 15 ALA E 82 THR E 86 5 5 HELIX 16 16 ASP E 117 VAL E 121 5 5 HELIX 17 17 SER E 132 GLN E 140 1 9 HELIX 18 18 ALA E 199 GLN E 203 1 5 HELIX 19 19 GLN G 79 SER G 83 5 5 HELIX 20 20 ALA H 82 THR H 86 5 5 HELIX 21 21 SER H 132 GLN H 140 1 9 HELIX 22 22 ALA H 199 ASN H 204 1 6 SHEET 1 A 8 GLU A 44 PRO A 45 0 SHEET 2 A 8 HIS A 31 ASP A 37 -1 N THR A 35 O GLU A 44 SHEET 3 A 8 PHE A 22 VAL A 28 -1 N GLY A 26 O ILE A 33 SHEET 4 A 8 HIS A 3 VAL A 12 -1 N PHE A 8 O VAL A 25 SHEET 5 A 8 THR A 91 LEU A 100 -1 O TYR A 92 N GLY A 11 SHEET 6 A 8 THR A 106 TYR A 114 -1 O ALA A 113 N GLN A 93 SHEET 7 A 8 GLN A 117 ASN A 123 -1 O LEU A 120 N TYR A 112 SHEET 8 A 8 SER A 128 ALA A 131 -1 O SER A 128 N ASN A 123 SHEET 1 B 4 LEU A 183 GLU A 190 0 SHEET 2 B 4 THR A 196 PHE A 205 -1 O ALA A 197 N LYS A 189 SHEET 3 B 4 TYR A 238 ILE A 244 -1 O ALA A 240 N ALA A 202 SHEET 4 B 4 ASP A 226 TYR A 227 -1 N ASP A 226 O SER A 243 SHEET 1 C 4 LEU A 183 GLU A 190 0 SHEET 2 C 4 THR A 196 PHE A 205 -1 O ALA A 197 N LYS A 189 SHEET 3 C 4 TYR A 238 ILE A 244 -1 O ALA A 240 N ALA A 202 SHEET 4 C 4 LEU A 231 PRO A 232 -1 N LEU A 231 O GLN A 239 SHEET 1 D 3 TYR A 211 LYS A 216 0 SHEET 2 D 3 TYR A 254 HIS A 260 -1 O HIS A 257 N THR A 213 SHEET 3 D 3 VAL A 263 GLN A 268 -1 O MET A 265 N VAL A 258 SHEET 1 E 4 LYS B 6 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 E 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 F 4 LYS B 6 SER B 11 0 SHEET 2 F 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 F 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 F 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 G 4 GLU B 44 ARG B 45 0 SHEET 2 G 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 G 4 TYR B 78 ASN B 83 -1 O ALA B 79 N LEU B 40 SHEET 4 G 4 LYS B 91 LYS B 94 -1 O VAL B 93 N CYS B 80 SHEET 1 H 8 GLU C 44 PRO C 45 0 SHEET 2 H 8 HIS C 31 ASP C 37 -1 N THR C 35 O GLU C 44 SHEET 3 H 8 PHE C 22 VAL C 28 -1 N SER C 24 O TYR C 36 SHEET 4 H 8 HIS C 3 VAL C 12 -1 N PHE C 8 O VAL C 25 SHEET 5 H 8 THR C 91 LEU C 100 -1 O TYR C 92 N GLY C 11 SHEET 6 H 8 THR C 106 TYR C 114 -1 O ALA C 113 N GLN C 93 SHEET 7 H 8 GLN C 117 ASN C 123 -1 O LEU C 120 N TYR C 112 SHEET 8 H 8 SER C 128 ALA C 131 -1 O LEU C 130 N ILE C 121 SHEET 1 I 4 LEU C 183 ASN C 187 0 SHEET 2 I 4 LEU C 198 PHE C 205 -1 O HIS C 203 N LEU C 183 SHEET 3 I 4 TYR C 238 ILE C 244 -1 O ILE C 244 N LEU C 198 SHEET 4 I 4 ASP C 226 TYR C 227 -1 N ASP C 226 O SER C 243 SHEET 1 J 4 LEU C 183 ASN C 187 0 SHEET 2 J 4 LEU C 198 PHE C 205 -1 O HIS C 203 N LEU C 183 SHEET 3 J 4 TYR C 238 ILE C 244 -1 O ILE C 244 N LEU C 198 SHEET 4 J 4 LEU C 231 PRO C 232 -1 N LEU C 231 O GLN C 239 SHEET 1 K 3 TYR C 211 LYS C 216 0 SHEET 2 K 3 TYR C 254 HIS C 260 -1 O HIS C 257 N THR C 213 SHEET 3 K 3 VAL C 263 GLN C 268 -1 O MET C 265 N VAL C 258 SHEET 1 L 5 ASN D 3 ASP D 5 0 SHEET 2 L 5 VAL D 18 GLN D 25 -1 O THR D 23 N ASP D 5 SHEET 3 L 5 TYR D 70 LEU D 75 -1 O LEU D 73 N ILE D 20 SHEET 4 L 5 PHE D 60 SER D 65 -1 N SER D 61 O LEU D 74 SHEET 5 L 5 GLY D 53 LYS D 57 -1 N GLU D 55 O SER D 62 SHEET 1 M 5 GLU D 9 THR D 13 0 SHEET 2 M 5 THR D 103 LYS D 108 1 O ILE D 106 N MET D 10 SHEET 3 M 5 ALA D 84 LYS D 91 -1 N ALA D 84 O LEU D 105 SHEET 4 M 5 LEU D 32 GLN D 37 -1 N PHE D 33 O ALA D 89 SHEET 5 M 5 THR D 44 ASN D 49 -1 O LEU D 46 N TRP D 34 SHEET 1 N 4 GLU D 9 THR D 13 0 SHEET 2 N 4 THR D 103 LYS D 108 1 O ILE D 106 N MET D 10 SHEET 3 N 4 ALA D 84 LYS D 91 -1 N ALA D 84 O LEU D 105 SHEET 4 N 4 LEU D 97 TRP D 99 -1 O ILE D 98 N VAL D 90 SHEET 1 O 4 ALA D 117 GLN D 120 0 SHEET 2 O 4 SER D 130 THR D 135 -1 O LEU D 133 N TYR D 119 SHEET 3 O 4 PHE D 166 SER D 175 -1 O ALA D 173 N CYS D 132 SHEET 4 O 4 TYR D 152 ILE D 153 -1 N TYR D 152 O TRP D 174 SHEET 1 P 4 ALA D 117 GLN D 120 0 SHEET 2 P 4 SER D 130 THR D 135 -1 O LEU D 133 N TYR D 119 SHEET 3 P 4 PHE D 166 SER D 175 -1 O ALA D 173 N CYS D 132 SHEET 4 P 4 CYS D 157 MET D 161 -1 N MET D 161 O PHE D 166 SHEET 1 Q 4 VAL E 4 THR E 7 0 SHEET 2 Q 4 MET E 19 GLN E 25 -1 O ALA E 24 N THR E 5 SHEET 3 Q 4 PHE E 74 LEU E 78 -1 O LEU E 78 N MET E 19 SHEET 4 Q 4 TYR E 64 ARG E 68 -1 N ASN E 65 O ARG E 77 SHEET 1 R 6 PHE E 10 LYS E 14 0 SHEET 2 R 6 SER E 110 LEU E 115 1 O LEU E 115 N LEU E 13 SHEET 3 R 6 SER E 87 SER E 94 -1 N TYR E 89 O SER E 110 SHEET 4 R 6 SER E 31 GLN E 37 -1 N TYR E 35 O PHE E 90 SHEET 5 R 6 ARG E 44 SER E 49 -1 O ILE E 46 N TRP E 34 SHEET 6 R 6 ASP E 56 LYS E 57 -1 O ASP E 56 N TYR E 48 SHEET 1 S 4 PHE E 10 LYS E 14 0 SHEET 2 S 4 SER E 110 LEU E 115 1 O LEU E 115 N LEU E 13 SHEET 3 S 4 SER E 87 SER E 94 -1 N TYR E 89 O SER E 110 SHEET 4 S 4 PHE E 105 PHE E 106 -1 O PHE E 105 N SER E 93 SHEET 1 T 4 GLU E 125 PHE E 129 0 SHEET 2 T 4 LYS E 141 PHE E 151 -1 O VAL E 145 N PHE E 129 SHEET 3 T 4 TYR E 189 SER E 198 -1 O TYR E 189 N PHE E 151 SHEET 4 T 4 VAL E 171 THR E 173 -1 N CYS E 172 O ARG E 194 SHEET 1 U 4 GLU E 125 PHE E 129 0 SHEET 2 U 4 LYS E 141 PHE E 151 -1 O VAL E 145 N PHE E 129 SHEET 3 U 4 TYR E 189 SER E 198 -1 O TYR E 189 N PHE E 151 SHEET 4 U 4 LEU E 178 LYS E 179 -1 N LEU E 178 O ALA E 190 SHEET 1 V 4 LYS E 165 VAL E 167 0 SHEET 2 V 4 VAL E 156 VAL E 162 -1 N VAL E 162 O LYS E 165 SHEET 3 V 4 HIS E 208 PHE E 215 -1 O GLN E 214 N GLU E 157 SHEET 4 V 4 GLN E 234 TRP E 241 -1 O GLN E 234 N PHE E 215 SHEET 1 W 4 LYS F 6 SER F 11 0 SHEET 2 W 4 ASN F 21 PHE F 30 -1 O ASN F 24 N TYR F 10 SHEET 3 W 4 PHE F 62 PHE F 70 -1 O TYR F 66 N CYS F 25 SHEET 4 W 4 GLU F 50 HIS F 51 -1 N GLU F 50 O TYR F 67 SHEET 1 X 4 LYS F 6 SER F 11 0 SHEET 2 X 4 ASN F 21 PHE F 30 -1 O ASN F 24 N TYR F 10 SHEET 3 X 4 PHE F 62 PHE F 70 -1 O TYR F 66 N CYS F 25 SHEET 4 X 4 SER F 55 PHE F 56 -1 N SER F 55 O TYR F 63 SHEET 1 Y 4 GLU F 44 ARG F 45 0 SHEET 2 Y 4 GLU F 36 LYS F 41 -1 N LYS F 41 O GLU F 44 SHEET 3 Y 4 TYR F 78 ASN F 83 -1 O ARG F 81 N ASP F 38 SHEET 4 Y 4 LYS F 91 LYS F 94 -1 O LYS F 91 N VAL F 82 SHEET 1 Z 5 ASN G 3 ASP G 5 0 SHEET 2 Z 5 VAL G 18 GLN G 25 -1 O THR G 23 N ASP G 5 SHEET 3 Z 5 TYR G 70 LEU G 75 -1 O LEU G 73 N ILE G 20 SHEET 4 Z 5 PHE G 60 SER G 65 -1 N SER G 61 O LEU G 74 SHEET 5 Z 5 GLY G 53 LYS G 57 -1 N LYS G 57 O PHE G 60 SHEET 1 AA 5 GLU G 9 THR G 13 0 SHEET 2 AA 5 THR G 103 LYS G 108 1 O ILE G 106 N MET G 10 SHEET 3 AA 5 ALA G 84 LYS G 91 -1 N ALA G 84 O LEU G 105 SHEET 4 AA 5 LEU G 32 GLN G 37 -1 N GLN G 37 O SER G 85 SHEET 5 AA 5 THR G 44 ASN G 49 -1 O ASN G 49 N LEU G 32 SHEET 1 AB 4 GLU G 9 THR G 13 0 SHEET 2 AB 4 THR G 103 LYS G 108 1 O ILE G 106 N MET G 10 SHEET 3 AB 4 ALA G 84 LYS G 91 -1 N ALA G 84 O LEU G 105 SHEET 4 AB 4 LEU G 97 TRP G 99 -1 O ILE G 98 N VAL G 90 SHEET 1 AC 4 ALA G 117 LEU G 121 0 SHEET 2 AC 4 VAL G 131 THR G 135 -1 O VAL G 131 N LEU G 121 SHEET 3 AC 4 PHE G 166 SER G 175 -1 O ALA G 173 N CYS G 132 SHEET 4 AC 4 VAL G 151 ILE G 153 -1 N TYR G 152 O TRP G 174 SHEET 1 AD 4 ALA G 117 LEU G 121 0 SHEET 2 AD 4 VAL G 131 THR G 135 -1 O VAL G 131 N LEU G 121 SHEET 3 AD 4 PHE G 166 SER G 175 -1 O ALA G 173 N CYS G 132 SHEET 4 AD 4 CYS G 157 MET G 161 -1 N MET G 161 O PHE G 166 SHEET 1 AE 4 VAL H 4 THR H 7 0 SHEET 2 AE 4 MET H 19 GLN H 25 -1 O ALA H 24 N THR H 5 SHEET 3 AE 4 PHE H 74 LEU H 78 -1 O LEU H 76 N LEU H 21 SHEET 4 AE 4 TYR H 64 ARG H 68 -1 N ASN H 65 O ARG H 77 SHEET 1 AF 6 PHE H 10 LYS H 14 0 SHEET 2 AF 6 SER H 110 LEU H 115 1 O LEU H 115 N LEU H 13 SHEET 3 AF 6 SER H 87 SER H 94 -1 N TYR H 89 O SER H 110 SHEET 4 AF 6 SER H 31 GLN H 37 -1 N TYR H 35 O PHE H 90 SHEET 5 AF 6 ARG H 44 SER H 49 -1 O ILE H 46 N TRP H 34 SHEET 6 AF 6 ASP H 56 LYS H 57 -1 O ASP H 56 N TYR H 48 SHEET 1 AG 4 PHE H 10 LYS H 14 0 SHEET 2 AG 4 SER H 110 LEU H 115 1 O LEU H 115 N LEU H 13 SHEET 3 AG 4 SER H 87 SER H 94 -1 N TYR H 89 O SER H 110 SHEET 4 AG 4 PHE H 105 PHE H 106 -1 O PHE H 105 N SER H 93 SHEET 1 AH 4 GLU H 125 PHE H 129 0 SHEET 2 AH 4 LYS H 141 PHE H 151 -1 O LEU H 147 N ALA H 127 SHEET 3 AH 4 TYR H 189 SER H 198 -1 O VAL H 197 N ALA H 142 SHEET 4 AH 4 VAL H 171 THR H 173 -1 N CYS H 172 O ARG H 194 SHEET 1 AI 4 GLU H 125 PHE H 129 0 SHEET 2 AI 4 LYS H 141 PHE H 151 -1 O LEU H 147 N ALA H 127 SHEET 3 AI 4 TYR H 189 SER H 198 -1 O VAL H 197 N ALA H 142 SHEET 4 AI 4 LEU H 178 LYS H 179 -1 N LEU H 178 O ALA H 190 SHEET 1 AJ 4 LYS H 165 VAL H 167 0 SHEET 2 AJ 4 VAL H 156 VAL H 162 -1 N VAL H 162 O LYS H 165 SHEET 3 AJ 4 HIS H 208 PHE H 215 -1 O GLN H 212 N SER H 159 SHEET 4 AJ 4 GLN H 234 TRP H 241 -1 O GLN H 234 N PHE H 215 SSBOND 1 CYS A 98 CYS A 161 1555 1555 2.05 SSBOND 2 CYS A 200 CYS A 256 1555 1555 2.02 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS C 98 CYS C 161 1555 1555 2.05 SSBOND 5 CYS C 200 CYS C 256 1555 1555 2.01 SSBOND 6 CYS D 22 CYS D 88 1555 1555 2.03 SSBOND 7 CYS D 132 CYS D 182 1555 1555 2.04 SSBOND 8 CYS D 157 CYS E 172 1555 1555 2.05 SSBOND 9 CYS E 23 CYS E 91 1555 1555 2.02 SSBOND 10 CYS E 146 CYS E 211 1555 1555 2.02 SSBOND 11 CYS F 25 CYS F 80 1555 1555 2.04 SSBOND 12 CYS G 22 CYS G 88 1555 1555 2.02 SSBOND 13 CYS G 132 CYS G 182 1555 1555 2.05 SSBOND 14 CYS G 157 CYS H 172 1555 1555 2.05 SSBOND 15 CYS H 23 CYS H 91 1555 1555 2.03 SSBOND 16 CYS H 146 CYS H 211 1555 1555 2.03 CISPEP 1 TYR A 206 PRO A 207 0 3.35 CISPEP 2 HIS B 31 PRO B 32 0 4.47 CISPEP 3 TYR C 206 PRO C 207 0 0.59 CISPEP 4 THR E 7 PRO E 8 0 -1.60 CISPEP 5 TYR E 152 PRO E 153 0 -1.94 CISPEP 6 HIS F 31 PRO F 32 0 0.99 CISPEP 7 THR H 7 PRO H 8 0 -4.36 CISPEP 8 TYR H 152 PRO H 153 0 1.91 SITE 1 AC1 17 TYR A 7 ARG A 9 SER A 24 THR A 34 SITE 2 AC1 17 HIS A 58 TYR A 62 LEU A 66 ARG A 94 SITE 3 AC1 17 ILE A 96 TYR A 152 GLN A 153 TRP A 156 SITE 4 AC1 17 HOH A 427 HOH A 432 HOH A 438 TYR G 95 SITE 5 AC1 17 HOH H 345 SITE 1 AC2 17 TYR C 7 ARG C 9 SER C 24 THR C 34 SITE 2 AC2 17 HIS C 58 TYR C 62 LEU C 66 ARG C 94 SITE 3 AC2 17 ILE C 96 TYR C 152 GLN C 153 TRP C 156 SITE 4 AC2 17 HOH C 413 HOH C 414 HOH C 447 TYR D 95 SITE 5 AC2 17 HOH E 398 SITE 1 AC3 4 TYR D 24 THR D 26 GLY D 28 HOH D 484 CRYST1 215.580 68.874 142.977 90.00 104.21 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004639 0.000000 0.001175 0.00000 SCALE2 0.000000 0.014519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007215 0.00000