PDB Short entry for 4OTZ HEADER TRANSPORT PROTEIN 14-FEB-14 4OTZ TITLE THE CRYSTAL STRUCTURE OF A SOLUTE-BINDING PROTEIN (N280D MUTANT) FROM TITLE 2 ANABAENA VARIABILIS ATCC 29413 IN COMPLEX WITH CYSTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINO ACID/AMIDE ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN, COMPND 3 HAAT FAMILY; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANABAENA VARIABILIS; SOURCE 3 ORGANISM_TAXID: 240292; SOURCE 4 STRAIN: ATCC 29413; SOURCE 5 GENE: AVA_0465; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,H.LI,R.JEDRZEJCZAK,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 3 06-DEC-23 4OTZ 1 REMARK REVDAT 2 20-SEP-23 4OTZ 1 REMARK SEQADV LINK REVDAT 1 05-MAR-14 4OTZ 0 JRNL AUTH K.TAN,H.LI,R.JEDRZEJCZAK,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A SOLUTE-BINDING PROTEIN (N280D JRNL TITL 2 MUTANT) FROM ANABAENA VARIABILIS ATCC 29413 IN COMPLEX WITH JRNL TITL 3 CYSTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 157966 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.139 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 7914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.8517 - 4.2203 0.99 5278 275 0.1453 0.1660 REMARK 3 2 4.2203 - 3.3521 1.00 5167 293 0.1406 0.1433 REMARK 3 3 3.3521 - 2.9290 1.00 5170 255 0.1560 0.1913 REMARK 3 4 2.9290 - 2.6615 1.00 5107 289 0.1510 0.1799 REMARK 3 5 2.6615 - 2.4709 1.00 5103 267 0.1432 0.1553 REMARK 3 6 2.4709 - 2.3253 1.00 5137 256 0.1379 0.1540 REMARK 3 7 2.3253 - 2.2089 1.00 5033 278 0.1334 0.1553 REMARK 3 8 2.2089 - 2.1128 1.00 5084 275 0.1260 0.1584 REMARK 3 9 2.1128 - 2.0315 1.00 5096 254 0.1212 0.1574 REMARK 3 10 2.0315 - 1.9614 1.00 5078 245 0.1245 0.1558 REMARK 3 11 1.9614 - 1.9001 1.00 5095 265 0.1226 0.1679 REMARK 3 12 1.9001 - 1.8458 1.00 5066 269 0.1227 0.1816 REMARK 3 13 1.8458 - 1.7973 1.00 5027 282 0.1185 0.1424 REMARK 3 14 1.7973 - 1.7534 1.00 5081 248 0.1137 0.1505 REMARK 3 15 1.7534 - 1.7136 1.00 5029 265 0.1143 0.1524 REMARK 3 16 1.7136 - 1.6771 1.00 5038 269 0.1111 0.1595 REMARK 3 17 1.6771 - 1.6436 1.00 5064 252 0.1133 0.1765 REMARK 3 18 1.6436 - 1.6126 1.00 5066 268 0.1171 0.1572 REMARK 3 19 1.6126 - 1.5838 1.00 5066 239 0.1183 0.1662 REMARK 3 20 1.5838 - 1.5569 1.00 5096 248 0.1208 0.1584 REMARK 3 21 1.5569 - 1.5318 1.00 4989 259 0.1236 0.1611 REMARK 3 22 1.5318 - 1.5082 1.00 5049 262 0.1306 0.1848 REMARK 3 23 1.5082 - 1.4861 1.00 4995 311 0.1435 0.1863 REMARK 3 24 1.4861 - 1.4651 1.00 5036 279 0.1514 0.1981 REMARK 3 25 1.4651 - 1.4453 1.00 5009 253 0.1655 0.2035 REMARK 3 26 1.4453 - 1.4266 1.00 5049 292 0.1781 0.2067 REMARK 3 27 1.4266 - 1.4087 0.98 4888 265 0.1944 0.2309 REMARK 3 28 1.4087 - 1.3918 0.94 4765 252 0.2132 0.2742 REMARK 3 29 1.3918 - 1.3756 0.88 4404 249 0.2288 0.2591 REMARK 3 30 1.3756 - 1.3601 0.80 3987 200 0.2362 0.2825 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5713 REMARK 3 ANGLE : 1.044 7787 REMARK 3 CHIRALITY : 0.074 914 REMARK 3 PLANARITY : 0.005 1034 REMARK 3 DIHEDRAL : 13.216 2133 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OTZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000084945. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97883 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 158080 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 26.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 31.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.58800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY: 4NQR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ORIGINAL CRYSTALLIZATION CONDITION: REMARK 280 0.2 M POTASSIUM CHLORIDE, 20% (W/V) PEG 3350, 10MM VALINE. REMARK 280 CRYSTAL SOAKING CONDITION: 0.2 M POTASSIUM CHLORIDE, 20% (W/V) REMARK 280 PEG 3350, 10MM CYSTEIN, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.22900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.22900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 49.36900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.47600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 49.36900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.47600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 75.22900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 49.36900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.47600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 75.22900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 49.36900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.47600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 832 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 997 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 22 REMARK 465 ASN A 23 REMARK 465 ALA A 24 REMARK 465 THR A 25 REMARK 465 ASN A 26 REMARK 465 THR A 27 REMARK 465 ASP A 28 REMARK 465 THR A 29 REMARK 465 ASN A 30 REMARK 465 SER A 31 REMARK 465 THR A 32 REMARK 465 ASN A 33 REMARK 465 ASN A 34 REMARK 465 SER A 35 REMARK 465 PRO A 36 REMARK 465 ASN A 37 REMARK 465 ASN A 38 REMARK 465 THR A 39 REMARK 465 THR A 40 REMARK 465 ASN A 41 REMARK 465 THR A 42 REMARK 465 THR A 43 REMARK 465 THR A 44 REMARK 465 ASN A 45 REMARK 465 VAL A 46 REMARK 465 THR A 47 REMARK 465 THR A 48 REMARK 465 THR A 49 REMARK 465 SER A 50 REMARK 465 ASP A 51 REMARK 465 LYS A 52 REMARK 465 SER B 22 REMARK 465 ASN B 23 REMARK 465 ALA B 24 REMARK 465 THR B 25 REMARK 465 ASN B 26 REMARK 465 THR B 27 REMARK 465 ASP B 28 REMARK 465 THR B 29 REMARK 465 ASN B 30 REMARK 465 SER B 31 REMARK 465 THR B 32 REMARK 465 ASN B 33 REMARK 465 ASN B 34 REMARK 465 SER B 35 REMARK 465 PRO B 36 REMARK 465 ASN B 37 REMARK 465 ASN B 38 REMARK 465 THR B 39 REMARK 465 THR B 40 REMARK 465 ASN B 41 REMARK 465 THR B 42 REMARK 465 THR B 43 REMARK 465 THR B 44 REMARK 465 ASN B 45 REMARK 465 VAL B 46 REMARK 465 THR B 47 REMARK 465 THR B 48 REMARK 465 THR B 49 REMARK 465 SER B 50 REMARK 465 ASP B 51 REMARK 465 LYS B 52 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 122 CE NZ REMARK 470 LYS A 247 NZ REMARK 470 GLU A 307 CD OE1 OE2 REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 LYS A 314 CG CD CE NZ REMARK 470 LYS A 357 CE NZ REMARK 470 LYS A 394 CG CD CE NZ REMARK 470 LYS A 402 CD CE NZ REMARK 470 LYS A 405 CG CD CE NZ REMARK 470 LYS A 416 CE NZ REMARK 470 LYS B 97 CE NZ REMARK 470 LYS B 247 NZ REMARK 470 GLU B 311 CG CD OE1 OE2 REMARK 470 LYS B 314 NZ REMARK 470 LYS B 357 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 65 171.21 78.76 REMARK 500 ALA A 104 -153.54 55.29 REMARK 500 LEU A 256 -162.12 -102.11 REMARK 500 LYS A 292 -130.45 50.41 REMARK 500 ASN A 353 94.63 -162.74 REMARK 500 SER B 65 173.15 79.53 REMARK 500 ALA B 104 -152.46 53.19 REMARK 500 SER B 153 23.76 -149.48 REMARK 500 LYS B 292 -137.03 54.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 160 O REMARK 620 2 GLY A 163 O 80.9 REMARK 620 3 VAL A 166 O 92.5 97.1 REMARK 620 4 ILE A 388 O 89.0 161.7 98.6 REMARK 620 5 HOH A 990 O 172.0 100.0 79.5 92.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO B 160 O REMARK 620 2 GLY B 163 O 80.6 REMARK 620 3 VAL B 166 O 93.6 95.8 REMARK 620 4 ILE B 388 O 89.6 162.4 99.4 REMARK 620 5 HOH B 619 O 174.0 101.8 80.8 89.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYS A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYS B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NQR RELATED DB: PDB REMARK 900 N280D IN COMPLEX WITH ALANINE REMARK 900 RELATED ID: 4NV3 RELATED DB: PDB REMARK 900 N280D IN COMPLEX WITH VALINE REMARK 900 RELATED ID: 4OAT RELATED DB: PDB REMARK 900 N280D IN COMPLEX WITH ISOLEUCINE REMARK 900 RELATED ID: 4NBB RELATED DB: PDB REMARK 900 WT IN COMPLEX WITH (3S)-3-METHYL-2-OXOPENTANOIC ACID REMARK 900 RELATED ID: 4OG2 RELATED DB: PDB REMARK 900 N280D IN COMPLEX WITH LEUCINE REMARK 900 RELATED ID: MCSG-APC110063 RELATED DB: TARGETTRACK DBREF 4OTZ A 25 416 UNP Q3MFZ5 Q3MFZ5_ANAVT 25 416 DBREF 4OTZ B 25 416 UNP Q3MFZ5 Q3MFZ5_ANAVT 25 416 SEQADV 4OTZ SER A 22 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4OTZ ASN A 23 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4OTZ ALA A 24 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4OTZ ASP A 280 UNP Q3MFZ5 ASN 280 ENGINEERED MUTATION SEQADV 4OTZ SER B 22 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4OTZ ASN B 23 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4OTZ ALA B 24 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4OTZ ASP B 280 UNP Q3MFZ5 ASN 280 ENGINEERED MUTATION SEQRES 1 A 395 SER ASN ALA THR ASN THR ASP THR ASN SER THR ASN ASN SEQRES 2 A 395 SER PRO ASN ASN THR THR ASN THR THR THR ASN VAL THR SEQRES 3 A 395 THR THR SER ASP LYS ASN THR ILE PRO ILE GLY ILE ALA SEQRES 4 A 395 LEU ALA GLN THR SER ASN VAL ALA LEU LEU GLY GLN GLU SEQRES 5 A 395 GLN VAL ALA GLY ALA LYS ILE ALA GLU LYS TYR PHE ASN SEQRES 6 A 395 ASP LYS GLY GLY VAL ASN GLY THR PRO ILE LYS LEU ILE SEQRES 7 A 395 PHE GLN ASP THR ALA GLY ASP GLU ALA GLY THR ILE ASN SEQRES 8 A 395 ALA PHE GLN THR LEU ILE ASN LYS ASP LYS VAL VAL GLY SEQRES 9 A 395 ILE VAL GLY PRO THR LEU SER GLN GLN ALA PHE SER ALA SEQRES 10 A 395 ASN PRO ILE ALA GLU ARG ALA LYS VAL PRO VAL VAL GLY SEQRES 11 A 395 PRO SER ASN THR ALA LYS GLY ILE PRO GLU ILE GLY ASP SEQRES 12 A 395 TYR VAL ALA ARG VAL SER ALA PRO VAL SER VAL VAL ALA SEQRES 13 A 395 PRO ASN SER VAL LYS ALA ALA LEU LYS GLN ASN PRO ASN SEQRES 14 A 395 ILE LYS LYS VAL ALA VAL PHE PHE ALA GLN ASN ASP ALA SEQRES 15 A 395 PHE SER LYS SER GLU THR GLU ILE PHE GLN GLN THR VAL SEQRES 16 A 395 LYS ASP GLN GLY LEU GLU LEU VAL THR VAL GLN LYS PHE SEQRES 17 A 395 GLN THR THR ASP THR ASP PHE GLN SER GLN ALA THR ASN SEQRES 18 A 395 ALA ILE ASN LEU LYS PRO ASP LEU VAL ILE ILE SER GLY SEQRES 19 A 395 LEU ALA ALA ASP GLY GLY ASN LEU VAL ARG GLN LEU ARG SEQRES 20 A 395 GLU LEU GLY TYR GLN GLY ALA ILE ILE GLY GLY ASP GLY SEQRES 21 A 395 LEU ASN THR SER ASN VAL PHE ALA VAL CYS LYS ALA LEU SEQRES 22 A 395 CYS ASP GLY VAL LEU ILE ALA GLN ALA TYR SER PRO GLU SEQRES 23 A 395 TYR THR GLY GLU ILE ASN LYS ALA PHE ARG GLN ALA TYR SEQRES 24 A 395 VAL ASP GLN TYR LYS LYS GLU PRO PRO GLN PHE SER ALA SEQRES 25 A 395 GLN ALA PHE ALA ALA VAL GLN VAL TYR VAL GLU SER LEU SEQRES 26 A 395 LYS ALA LEU ASP THR LYS ASN LYS VAL SER LYS ILE GLN SEQRES 27 A 395 LEU PRO GLU LEU ARG THR GLU LEU ASN LYS GLN LEU LEU SEQRES 28 A 395 THR GLY LYS TYR ASN THR PRO LEU GLY GLU ILE SER PHE SEQRES 29 A 395 THR PRO ILE GLY GLU VAL VAL GLN LYS ASP PHE TYR VAL SEQRES 30 A 395 ALA GLN ILE LYS MSE GLU LYS ASP GLY SER GLN GLY LYS SEQRES 31 A 395 PHE THR PHE LEU LYS SEQRES 1 B 395 SER ASN ALA THR ASN THR ASP THR ASN SER THR ASN ASN SEQRES 2 B 395 SER PRO ASN ASN THR THR ASN THR THR THR ASN VAL THR SEQRES 3 B 395 THR THR SER ASP LYS ASN THR ILE PRO ILE GLY ILE ALA SEQRES 4 B 395 LEU ALA GLN THR SER ASN VAL ALA LEU LEU GLY GLN GLU SEQRES 5 B 395 GLN VAL ALA GLY ALA LYS ILE ALA GLU LYS TYR PHE ASN SEQRES 6 B 395 ASP LYS GLY GLY VAL ASN GLY THR PRO ILE LYS LEU ILE SEQRES 7 B 395 PHE GLN ASP THR ALA GLY ASP GLU ALA GLY THR ILE ASN SEQRES 8 B 395 ALA PHE GLN THR LEU ILE ASN LYS ASP LYS VAL VAL GLY SEQRES 9 B 395 ILE VAL GLY PRO THR LEU SER GLN GLN ALA PHE SER ALA SEQRES 10 B 395 ASN PRO ILE ALA GLU ARG ALA LYS VAL PRO VAL VAL GLY SEQRES 11 B 395 PRO SER ASN THR ALA LYS GLY ILE PRO GLU ILE GLY ASP SEQRES 12 B 395 TYR VAL ALA ARG VAL SER ALA PRO VAL SER VAL VAL ALA SEQRES 13 B 395 PRO ASN SER VAL LYS ALA ALA LEU LYS GLN ASN PRO ASN SEQRES 14 B 395 ILE LYS LYS VAL ALA VAL PHE PHE ALA GLN ASN ASP ALA SEQRES 15 B 395 PHE SER LYS SER GLU THR GLU ILE PHE GLN GLN THR VAL SEQRES 16 B 395 LYS ASP GLN GLY LEU GLU LEU VAL THR VAL GLN LYS PHE SEQRES 17 B 395 GLN THR THR ASP THR ASP PHE GLN SER GLN ALA THR ASN SEQRES 18 B 395 ALA ILE ASN LEU LYS PRO ASP LEU VAL ILE ILE SER GLY SEQRES 19 B 395 LEU ALA ALA ASP GLY GLY ASN LEU VAL ARG GLN LEU ARG SEQRES 20 B 395 GLU LEU GLY TYR GLN GLY ALA ILE ILE GLY GLY ASP GLY SEQRES 21 B 395 LEU ASN THR SER ASN VAL PHE ALA VAL CYS LYS ALA LEU SEQRES 22 B 395 CYS ASP GLY VAL LEU ILE ALA GLN ALA TYR SER PRO GLU SEQRES 23 B 395 TYR THR GLY GLU ILE ASN LYS ALA PHE ARG GLN ALA TYR SEQRES 24 B 395 VAL ASP GLN TYR LYS LYS GLU PRO PRO GLN PHE SER ALA SEQRES 25 B 395 GLN ALA PHE ALA ALA VAL GLN VAL TYR VAL GLU SER LEU SEQRES 26 B 395 LYS ALA LEU ASP THR LYS ASN LYS VAL SER LYS ILE GLN SEQRES 27 B 395 LEU PRO GLU LEU ARG THR GLU LEU ASN LYS GLN LEU LEU SEQRES 28 B 395 THR GLY LYS TYR ASN THR PRO LEU GLY GLU ILE SER PHE SEQRES 29 B 395 THR PRO ILE GLY GLU VAL VAL GLN LYS ASP PHE TYR VAL SEQRES 30 B 395 ALA GLN ILE LYS MSE GLU LYS ASP GLY SER GLN GLY LYS SEQRES 31 B 395 PHE THR PHE LEU LYS MODRES 4OTZ MSE A 403 MET SELENOMETHIONINE MODRES 4OTZ MSE B 403 MET SELENOMETHIONINE HET MSE A 403 8 HET MSE B 403 8 HET CYS A 501 7 HET MG A 502 1 HET CYS B 501 7 HET MG B 502 1 HETNAM MSE SELENOMETHIONINE HETNAM CYS CYSTEINE HETNAM MG MAGNESIUM ION FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 CYS 2(C3 H7 N O2 S) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *783(H2 O) HELIX 1 1 VAL A 67 LYS A 88 1 22 HELIX 2 2 ASP A 106 LYS A 120 1 15 HELIX 3 3 LEU A 131 LYS A 146 1 16 HELIX 4 4 ILE A 159 GLY A 163 5 5 HELIX 5 5 PRO A 172 ALA A 177 1 6 HELIX 6 6 ALA A 177 ASN A 188 1 12 HELIX 7 7 ASP A 202 GLN A 219 1 18 HELIX 8 8 PHE A 236 ASN A 245 1 10 HELIX 9 9 LEU A 256 LEU A 270 1 15 HELIX 10 10 ASP A 280 ASN A 283 5 4 HELIX 11 11 THR A 284 ASN A 286 5 3 HELIX 12 12 VAL A 287 LYS A 292 1 6 HELIX 13 13 ALA A 293 ASP A 296 5 4 HELIX 14 14 GLY A 310 LYS A 325 1 16 HELIX 15 15 PRO A 329 ASN A 353 1 25 HELIX 16 16 LYS A 354 ILE A 358 5 5 HELIX 17 17 GLN A 359 GLY A 374 1 16 HELIX 18 18 VAL B 67 LYS B 88 1 22 HELIX 19 19 ASP B 106 LYS B 120 1 15 HELIX 20 20 LEU B 131 LYS B 146 1 16 HELIX 21 21 ILE B 159 GLY B 163 5 5 HELIX 22 22 PRO B 172 ASN B 188 1 17 HELIX 23 23 ASP B 202 GLY B 220 1 19 HELIX 24 24 PHE B 236 ASN B 245 1 10 HELIX 25 25 LEU B 256 LEU B 270 1 15 HELIX 26 26 ASP B 280 ASN B 283 5 4 HELIX 27 27 THR B 284 ASN B 286 5 3 HELIX 28 28 VAL B 287 LYS B 292 1 6 HELIX 29 29 ALA B 293 ASP B 296 5 4 HELIX 30 30 GLY B 310 LYS B 325 1 16 HELIX 31 31 PRO B 329 ASN B 353 1 25 HELIX 32 32 LYS B 354 ILE B 358 5 5 HELIX 33 33 GLN B 359 GLY B 374 1 16 SHEET 1 A 5 ILE A 96 PHE A 100 0 SHEET 2 A 5 ILE A 55 ILE A 59 1 N ILE A 59 O ILE A 99 SHEET 3 A 5 ILE A 126 VAL A 127 1 O VAL A 127 N GLY A 58 SHEET 4 A 5 VAL A 149 GLY A 151 1 O VAL A 150 N ILE A 126 SHEET 5 A 5 VAL A 166 ARG A 168 1 O ALA A 167 N GLY A 151 SHEET 1 B 4 GLU A 222 PHE A 229 0 SHEET 2 B 4 LYS A 193 ALA A 199 1 N VAL A 196 O GLN A 227 SHEET 3 B 4 LEU A 250 SER A 254 1 O ILE A 252 N PHE A 197 SHEET 4 B 4 ALA A 275 GLY A 278 1 O ILE A 277 N VAL A 251 SHEET 1 C 3 LEU A 299 GLN A 302 0 SHEET 2 C 3 TYR A 397 MSE A 403 -1 O TYR A 397 N GLN A 302 SHEET 3 C 3 GLY A 410 PHE A 414 -1 O THR A 413 N GLN A 400 SHEET 1 D 3 LYS A 375 THR A 378 0 SHEET 2 D 3 GLY A 381 PHE A 385 -1 O ILE A 383 N TYR A 376 SHEET 3 D 3 VAL A 391 VAL A 392 -1 O VAL A 392 N SER A 384 SHEET 1 E 5 ILE B 96 PHE B 100 0 SHEET 2 E 5 ILE B 55 ILE B 59 1 N ILE B 59 O ILE B 99 SHEET 3 E 5 ILE B 126 VAL B 127 1 O VAL B 127 N GLY B 58 SHEET 4 E 5 VAL B 149 GLY B 151 1 O VAL B 150 N ILE B 126 SHEET 5 E 5 VAL B 166 ARG B 168 1 O ALA B 167 N GLY B 151 SHEET 1 F 4 GLU B 222 PHE B 229 0 SHEET 2 F 4 LYS B 193 ALA B 199 1 N VAL B 196 O GLN B 227 SHEET 3 F 4 LEU B 250 SER B 254 1 O ILE B 252 N PHE B 197 SHEET 4 F 4 ALA B 275 GLY B 278 1 O ILE B 277 N VAL B 251 SHEET 1 G 3 LEU B 299 GLN B 302 0 SHEET 2 G 3 TYR B 397 MSE B 403 -1 O TYR B 397 N GLN B 302 SHEET 3 G 3 GLY B 410 PHE B 414 -1 O LYS B 411 N LYS B 402 SHEET 1 H 3 LYS B 375 THR B 378 0 SHEET 2 H 3 GLY B 381 PHE B 385 -1 O ILE B 383 N TYR B 376 SHEET 3 H 3 VAL B 391 VAL B 392 -1 O VAL B 392 N SER B 384 SSBOND 1 CYS A 291 CYS A 295 1555 1555 2.02 SSBOND 2 CYS B 291 CYS B 295 1555 1555 2.03 LINK C LYS A 402 N MSE A 403 1555 1555 1.33 LINK C MSE A 403 N GLU A 404 1555 1555 1.32 LINK C LYS B 402 N MSE B 403 1555 1555 1.33 LINK C MSE B 403 N GLU B 404 1555 1555 1.32 LINK O PRO A 160 MG MG A 502 1555 1555 2.51 LINK O GLY A 163 MG MG A 502 1555 1555 2.42 LINK O VAL A 166 MG MG A 502 1555 1555 2.51 LINK O ILE A 388 MG MG A 502 1555 1555 2.36 LINK MG MG A 502 O HOH A 990 1555 1555 2.36 LINK O PRO B 160 MG MG B 502 1555 1555 2.54 LINK O GLY B 163 MG MG B 502 1555 1555 2.42 LINK O VAL B 166 MG MG B 502 1555 1555 2.50 LINK O ILE B 388 MG MG B 502 1555 1555 2.37 LINK MG MG B 502 O HOH B 619 1555 1555 2.36 CISPEP 1 GLY A 128 PRO A 129 0 -8.18 CISPEP 2 GLY B 128 PRO B 129 0 -6.98 SITE 1 AC1 10 LEU A 70 THR A 130 LEU A 131 SER A 132 SITE 2 AC1 10 SER A 153 ASN A 154 THR A 155 PHE A 204 SITE 3 AC1 10 ASP A 280 HOH A 657 SITE 1 AC2 5 PRO A 160 GLY A 163 VAL A 166 ILE A 388 SITE 2 AC2 5 HOH A 990 SITE 1 AC3 9 THR B 130 LEU B 131 SER B 132 SER B 153 SITE 2 AC3 9 ASN B 154 THR B 155 PHE B 204 ASP B 280 SITE 3 AC3 9 HOH B 617 SITE 1 AC4 5 PRO B 160 GLY B 163 VAL B 166 ILE B 388 SITE 2 AC4 5 HOH B 619 CRYST1 98.738 100.952 150.458 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010128 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006646 0.00000