PDB Short entry for 4PAL HEADER CALCIUM BINDING PROTEIN 08-NOV-90 4PAL TITLE IONIC INTERACTIONS WITH PARVALBUMINS. CRYSTAL STRUCTURE TITLE 2 DETERMINATION OF PIKE 4.10 PARVALBUMIN IN FOUR DIFFERENT TITLE 3 IONIC ENVIRONMENTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PARVALBUMIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESOX LUCIUS; SOURCE 3 ORGANISM_COMMON: NORTHERN PIKE; SOURCE 4 ORGANISM_TAXID: 8010 KEYWDS CALCIUM BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.P.DECLERCQ,B.TINANT,J.PARELLO,J.RAMBAUD REVDAT 4 24-FEB-09 4PAL 1 VERSN REVDAT 3 01-APR-03 4PAL 1 JRNL REVDAT 2 15-MAY-95 4PAL 1 COMPND SOURCE JRNL REMARK REVDAT 1 15-JAN-92 4PAL 0 JRNL AUTH J.P.DECLERCQ,B.TINANT,J.PARELLO,J.RAMBAUD JRNL TITL IONIC INTERACTIONS WITH PARVALBUMINS. CRYSTAL JRNL TITL 2 STRUCTURE DETERMINATION OF PIKE 4.10 PARVALBUMIN JRNL TITL 3 IN FOUR DIFFERENT IONIC ENVIRONMENTS. JRNL REF J.MOL.BIOL. V. 220 1017 1991 JRNL REFN ISSN 0022-2836 JRNL PMID 1880797 JRNL DOI 10.1016/0022-2836(91)90369-H REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.-P.DECLERCQ,B.TINANT,J.PARELLO,G.ETIENNE,R.HUBER REMARK 1 TITL CRYSTAL STRUCTURE DETERMINATION AND REFINEMENT OF REMARK 1 TITL 2 PIKE 4.10 PARVALBUMIN (MINOR COMPONENT FROM ESOX REMARK 1 TITL 3 LUCIUS) REMARK 1 REF J.MOL.BIOL. V. 202 349 1988 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : EREF REMARK 3 AUTHORS : JACK,LEVITT REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 805 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 88 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.030 REMARK 3 BOND ANGLES (DEGREES) : 2.90 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PAL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.70000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.75000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.85000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.75000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.75000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.55000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.75000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.75000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 21.85000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.75000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.75000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 65.55000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 43.70000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 1 CB OG REMARK 480 LYS A 7 CD CE NZ REMARK 480 LYS A 25 CE NZ REMARK 480 LYS A 83 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 285 O HOH A 285 7645 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 54 CD LYS A 54 CE 0.157 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 22 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 41 CB - CA - C ANGL. DEV. = -12.8 DEGREES REMARK 500 ASP A 41 CB - CG - OD1 ANGL. DEV. = 9.6 DEGREES REMARK 500 ASP A 53 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 75 NH1 - CZ - NH2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 75 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 75 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP A 79 CA - CB - CG ANGL. DEV. = -14.9 DEGREES REMARK 500 ASP A 88 CB - CG - OD2 ANGL. DEV. = 9.1 DEGREES REMARK 500 ASP A 90 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 2 179.50 -33.02 REMARK 500 ALA A 3 21.49 49.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP A 22 -14.33 REMARK 500 LYS A 32 11.95 REMARK 500 LYS A 38 -10.77 REMARK 500 PHE A 57 -10.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLU A 101 24.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 250 DISTANCE = 5.75 ANGSTROMS REMARK 525 HOH A 255 DISTANCE = 5.06 ANGSTROMS REMARK 525 HOH A 258 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH A 260 DISTANCE = 5.80 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 110 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD1 REMARK 620 2 ASP A 94 OD1 90.4 REMARK 620 3 MET A 96 O 167.9 81.3 REMARK 620 4 GLU A 101 OE1 98.1 165.9 91.7 REMARK 620 5 HOH A 246 O 99.7 79.1 87.4 88.3 REMARK 620 6 ASP A 90 OD2 85.5 84.9 85.0 106.9 163.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 111 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 57 O REMARK 620 2 GLU A 62 OE2 83.5 REMARK 620 3 GLU A 62 OE1 131.1 48.5 REMARK 620 4 GLU A 59 OE1 87.8 82.1 93.2 REMARK 620 5 ASP A 53 OD1 153.2 122.5 74.1 101.1 REMARK 620 6 SER A 55 OG 77.1 155.9 151.5 82.8 79.0 REMARK 620 7 ASP A 51 OD1 82.3 101.7 97.1 168.9 85.7 90.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 223 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 257 O REMARK 620 2 HOH A 287 O 86.1 REMARK 620 3 HOH A 256 O 95.6 173.6 REMARK 620 4 HOH A 231 O 171.0 85.0 93.4 REMARK 620 5 HOH A 230 O 87.9 85.0 88.9 92.3 REMARK 620 6 ASP A 53 OD2 94.0 90.4 95.7 85.1 174.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CD REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: CALCIUM BINDING SITE REMARK 800 SITE_IDENTIFIER: EF REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: MAGNESIUM BINDING SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 110 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 111 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 223 DBREF 4PAL A 1 108 UNP P02619 PRVB_ESOLU 1 107 SEQRES 1 A 108 ACE SER PHE ALA GLY LEU LYS ASP ALA ASP VAL ALA ALA SEQRES 2 A 108 ALA LEU ALA ALA CYS SER ALA ALA ASP SER PHE LYS HIS SEQRES 3 A 108 LYS GLU PHE PHE ALA LYS VAL GLY LEU ALA SER LYS SER SEQRES 4 A 108 LEU ASP ASP VAL LYS LYS ALA PHE TYR VAL ILE ASP GLN SEQRES 5 A 108 ASP LYS SER GLY PHE ILE GLU GLU ASP GLU LEU LYS LEU SEQRES 6 A 108 PHE LEU GLN ASN PHE SER PRO SER ALA ARG ALA LEU THR SEQRES 7 A 108 ASP ALA GLU THR LYS ALA PHE LEU ALA ASP GLY ASP LYS SEQRES 8 A 108 ASP GLY ASP GLY MET ILE GLY VAL ASP GLU PHE ALA ALA SEQRES 9 A 108 MET ILE LYS ALA HET ACE A 0 3 HET MG A 110 1 HET CA A 111 1 HET MG A 223 1 HETNAM ACE ACETYL GROUP HETNAM MG MAGNESIUM ION HETNAM CA CALCIUM ION FORMUL 1 ACE C2 H4 O FORMUL 2 MG 2(MG 2+) FORMUL 3 CA CA 2+ FORMUL 5 HOH *88(H2 O) HELIX 1 A ASP A 8 ALA A 17 1 10 HELIX 2 B HIS A 26 VAL A 33 1 8 HELIX 3 C LEU A 40 ILE A 50 1 11 HELIX 4 D GLU A 60 PHE A 70 1BENDING AT RESIDUE 65 11 HELIX 5 E ASP A 79 GLY A 89 1 11 HELIX 6 F VAL A 99 LYS A 107 1 9 LINK C ACE A 0 N SER A 1 1555 1555 1.48 LINK MG MG A 110 OD1 ASP A 92 1555 1555 2.09 LINK MG MG A 110 OD1 ASP A 94 1555 1555 2.18 LINK MG MG A 110 O MET A 96 1555 1555 2.14 LINK MG MG A 110 OE1 GLU A 101 1555 1555 2.05 LINK MG MG A 110 O HOH A 246 1555 1555 2.15 LINK MG MG A 110 OD2 ASP A 90 1555 1555 2.07 LINK CA CA A 111 O PHE A 57 1555 1555 2.43 LINK CA CA A 111 OE2 GLU A 62 1555 1555 2.50 LINK CA CA A 111 OE1 GLU A 62 1555 1555 2.70 LINK CA CA A 111 OE1 GLU A 59 1555 1555 2.33 LINK CA CA A 111 OD1 ASP A 53 1555 1555 2.34 LINK CA CA A 111 OG SER A 55 1555 1555 2.55 LINK CA CA A 111 OD1 ASP A 51 1555 1555 2.17 LINK MG MG A 223 O HOH A 257 1555 1555 2.16 LINK MG MG A 223 O HOH A 287 1555 1555 2.28 LINK MG MG A 223 O HOH A 256 1555 1555 2.11 LINK MG MG A 223 O HOH A 231 1555 1555 2.15 LINK MG MG A 223 O HOH A 230 1555 1555 2.21 LINK MG MG A 223 OD2 ASP A 53 1555 1555 2.16 SITE 1 CD 12 ASP A 51 GLN A 52 ASP A 53 LYS A 54 SITE 2 CD 12 SER A 55 GLY A 56 PHE A 57 ILE A 58 SITE 3 CD 12 GLU A 59 GLU A 60 ASP A 61 GLU A 62 SITE 1 EF 12 ASP A 90 LYS A 91 ASP A 92 GLY A 93 SITE 2 EF 12 ASP A 94 GLY A 95 MET A 96 ILE A 97 SITE 3 EF 12 GLY A 98 VAL A 99 ASP A 100 GLU A 101 SITE 1 AC1 6 ASP A 90 ASP A 92 ASP A 94 MET A 96 SITE 2 AC1 6 GLU A 101 HOH A 246 SITE 1 AC2 6 ASP A 51 ASP A 53 SER A 55 PHE A 57 SITE 2 AC2 6 GLU A 59 GLU A 62 SITE 1 AC3 6 ASP A 53 HOH A 230 HOH A 231 HOH A 256 SITE 2 AC3 6 HOH A 257 HOH A 287 CRYST1 57.500 57.500 87.400 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017391 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017391 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011442 0.00000 HETATM 1 C ACE A 0 49.072 10.784 13.781 1.00 40.07 C HETATM 2 O ACE A 0 49.422 11.353 14.849 1.00 40.01 O HETATM 3 CH3 ACE A 0 47.683 11.163 13.364 1.00 38.19 C