PDB Short entry for 4PWQ HEADER HEPARIN BINDING PROTEIN 21-MAR-14 4PWQ TITLE HIGH-RESOLUTION CRYSTAL STRUCTURE OF THE E1-DOMAIN OF THE AMYLOID TITLE 2 PRECURSOR PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMYLOID BETA A4 PROTEIN; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: E1 DOMAIN; COMPND 5 SYNONYM: ABPP, APPI, APP, ALZHEIMER DISEASE AMYLOID PROTEIN, CEREBRAL COMPND 6 VASCULAR AMYLOID PEPTIDE, CVAP, PREA4, PROTEASE NEXIN-II, PN-II, N- COMPND 7 APP, SOLUBLE APP-ALPHA, S-APP-ALPHA, SOLUBLE APP-BETA, S-APP-BETA, COMPND 8 C99, BETA-AMYLOID PROTEIN 42, BETA-APP42, BETA-AMYLOID PROTEIN 40, COMPND 9 BETA-APP40, C83, P3(42), P3(40), C80, GAMMA-SECRETASE C-TERMINAL COMPND 10 FRAGMENT 59, AMYLOID INTRACELLULAR DOMAIN 59, AICD-59, AID(59), COMPND 11 GAMMA-CTF(59), GAMMA-SECRETASE C-TERMINAL FRAGMENT 57, AMYLOID COMPND 12 INTRACELLULAR DOMAIN 57, AICD-57, AID(57), GAMMA-CTF(57), GAMMA- COMPND 13 SECRETASE C-TERMINAL FRAGMENT 50, AMYLOID INTRACELLULAR DOMAIN 50, COMPND 14 AICD-50, AID(50), GAMMA-CTF(50), C31; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APP, A4, AD1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ORIGAMI B(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS HEPARIN BINDING, DIMERIZATION, HEPARIN BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.HOEFGEN,S.O.DAHMS,M.E.THAN REVDAT 1 04-FEB-15 4PWQ 0 JRNL AUTH S.HOEFGEN,S.O.DAHMS,K.OERTWIG,M.E.THAN JRNL TITL THE AMYLOID PRECURSOR PROTEIN SHOWS A PH-DEPENDENT JRNL TITL 2 CONFORMATIONAL SWITCH IN ITS E1 DOMAIN. JRNL REF J.MOL.BIOL. V. 427 433 2015 JRNL REFN ISSN 0022-2836 JRNL PMID 25528641 JRNL DOI 10.1016/J.JMB.2014.12.005 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.290 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 75220 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.5413 - 3.3016 0.93 3414 251 0.1198 0.1571 REMARK 3 2 3.3016 - 2.8136 0.93 3366 251 0.1335 0.2008 REMARK 3 3 2.8136 - 2.5265 0.93 3337 251 0.1521 0.2318 REMARK 3 4 2.5265 - 2.3294 1.00 3604 0 0.1537 0.0000 REMARK 3 5 2.3294 - 2.1823 0.92 3315 251 0.1619 0.1601 REMARK 3 6 2.1823 - 2.0664 0.92 3293 251 0.1643 0.1861 REMARK 3 7 2.0664 - 1.9718 0.98 3492 40 0.1770 0.1837 REMARK 3 8 1.9718 - 1.8924 0.93 3327 211 0.1807 0.2129 REMARK 3 9 1.8924 - 1.8245 0.92 3250 251 0.1795 0.2184 REMARK 3 10 1.8245 - 1.7653 0.91 3259 251 0.1897 0.2606 REMARK 3 11 1.7653 - 1.7132 0.99 3524 0 0.1885 0.0000 REMARK 3 12 1.7132 - 1.6667 0.92 3236 251 0.1922 0.2225 REMARK 3 13 1.6667 - 1.6249 0.91 3276 251 0.1927 0.1897 REMARK 3 14 1.6249 - 1.5870 0.98 3478 0 0.1988 0.0000 REMARK 3 15 1.5870 - 1.5524 0.91 3217 251 0.1992 0.2326 REMARK 3 16 1.5524 - 1.5206 0.91 3210 251 0.2053 0.2125 REMARK 3 17 1.5206 - 1.4913 0.98 3497 0 0.2025 0.0000 REMARK 3 18 1.4913 - 1.4641 0.91 3187 251 0.2025 0.2142 REMARK 3 19 1.4641 - 1.4388 0.91 3257 251 0.2146 0.2561 REMARK 3 20 1.4388 - 1.4151 0.90 3159 251 0.2208 0.2212 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4900 REMARK 3 OPERATOR: -H,-K,L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2591 REMARK 3 ANGLE : 1.056 3498 REMARK 3 CHIRALITY : 0.074 384 REMARK 3 PLANARITY : 0.005 451 REMARK 3 DIHEDRAL : 13.853 954 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PWQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-14. REMARK 100 THE RCSB ID CODE IS RCSB085314. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75220 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.050 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.89 REMARK 200 R MERGE FOR SHELL (I) : 0.48300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.990 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA-CITRATE, 20% PEG4000, 11% 2- REMARK 280 PROPANOLE, 10MM SARCOSINE, PH 5.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.34400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.67200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 26.67200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 53.34400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 360 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 567 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 588 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 488 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 436 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 551 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 563 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 470 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 17 REMARK 465 LEU B 18 REMARK 465 GLU B 19 REMARK 465 VAL B 20 REMARK 465 PRO B 21 REMARK 465 THR B 22 REMARK 465 ASP B 23 REMARK 465 GLY B 24 REMARK 465 ASN B 25 REMARK 465 ALA B 26 REMARK 465 GLY B 27 REMARK 465 LEU B 28 REMARK 465 LEU B 29 REMARK 465 ARG B 100 REMARK 465 GLY B 101 REMARK 465 ARG B 102 REMARK 465 LYS B 103 REMARK 465 GLN B 104 REMARK 465 CYS B 105 REMARK 465 LYS B 106 REMARK 465 ALA B 190 REMARK 465 ILE B 191 REMARK 465 GLU B 192 REMARK 465 GLY B 193 REMARK 465 ARG B 194 REMARK 465 LYS B 195 REMARK 465 LEU B 196 REMARK 465 ALA B 197 REMARK 465 ALA B 198 REMARK 465 ALA B 199 REMARK 465 LEU B 200 REMARK 465 GLU B 201 REMARK 465 HIS B 202 REMARK 465 HIS B 203 REMARK 465 HIS B 204 REMARK 465 HIS B 205 REMARK 465 HIS B 206 REMARK 465 HIS B 207 REMARK 465 MET A 17 REMARK 465 LEU A 18 REMARK 465 GLU A 19 REMARK 465 VAL A 20 REMARK 465 PRO A 21 REMARK 465 THR A 22 REMARK 465 ASP A 23 REMARK 465 GLY A 24 REMARK 465 ASN A 25 REMARK 465 ALA A 26 REMARK 465 GLY A 27 REMARK 465 ALA A 190 REMARK 465 ILE A 191 REMARK 465 GLU A 192 REMARK 465 GLY A 193 REMARK 465 ARG A 194 REMARK 465 LYS A 195 REMARK 465 LEU A 196 REMARK 465 ALA A 197 REMARK 465 ALA A 198 REMARK 465 ALA A 199 REMARK 465 LEU A 200 REMARK 465 GLU A 201 REMARK 465 HIS A 202 REMARK 465 HIS A 203 REMARK 465 HIS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN B 48 CD OE1 NE2 REMARK 480 LYS B 51 CD CE NZ REMARK 480 LEU A 29 CB CG CD1 CD2 REMARK 480 LYS A 51 CD CE NZ REMARK 480 LYS A 106 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 55 O HOH A 628 2.02 REMARK 500 O HOH A 606 O HOH A 625 2.02 REMARK 500 O HOH A 342 O HOH A 575 2.03 REMARK 500 O HOH B 325 O HOH B 528 2.04 REMARK 500 O HOH A 571 O HOH A 573 2.04 REMARK 500 O HOH B 548 O HOH B 564 2.06 REMARK 500 O HOH A 473 O HOH A 617 2.08 REMARK 500 O HOH A 510 O HOH A 586 2.10 REMARK 500 O HOH B 521 O HOH B 553 2.10 REMARK 500 O HOH B 449 O HOH B 556 2.11 REMARK 500 O HOH A 308 O HOH A 583 2.11 REMARK 500 O HOH A 578 O HOH A 594 2.11 REMARK 500 O HOH A 569 O HOH A 570 2.11 REMARK 500 O HOH A 594 O HOH A 632 2.12 REMARK 500 O HOH A 348 O HOH A 602 2.12 REMARK 500 O HOH B 509 O HOH B 511 2.13 REMARK 500 O HOH B 543 O HOH A 582 2.14 REMARK 500 O HOH A 438 O HOH A 593 2.14 REMARK 500 O HOH A 465 O HOH A 613 2.14 REMARK 500 O HOH A 612 O HOH A 615 2.15 REMARK 500 O HOH A 587 O HOH A 594 2.15 REMARK 500 O HOH B 361 O HOH B 493 2.15 REMARK 500 O HOH A 559 O HOH A 589 2.15 REMARK 500 O HOH A 541 O HOH A 549 2.16 REMARK 500 O HOH B 469 O HOH B 547 2.16 REMARK 500 NH1 ARG A 102 O HOH A 566 2.16 REMARK 500 O HOH A 359 O HOH A 502 2.16 REMARK 500 O ARG A 102 O HOH A 523 2.17 REMARK 500 O HOH A 467 O HOH A 621 2.17 REMARK 500 O HOH B 489 O HOH B 582 2.17 REMARK 500 O HOH B 512 O HOH B 513 2.18 REMARK 500 O HOH B 510 O HOH B 511 2.18 REMARK 500 O HOH B 542 O HOH B 569 2.18 REMARK 500 O HOH A 420 O HOH A 493 2.18 REMARK 500 O HOH A 432 O HOH A 592 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 606 O HOH A 606 4555 2.01 REMARK 500 O HOH A 625 O HOH A 625 4555 2.04 REMARK 500 O HOH B 517 O HOH B 533 5555 2.14 REMARK 500 O HOH B 379 O HOH B 531 5555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 61 -163.96 -116.07 REMARK 500 ASN B 96 60.21 62.47 REMARK 500 LYS B 132 -4.02 81.26 REMARK 500 LEU B 172 70.11 57.00 REMARK 500 THR A 61 -165.15 -121.55 REMARK 500 ASN A 96 52.59 -99.95 REMARK 500 CYS A 105 49.10 -84.56 REMARK 500 LYS A 132 -11.27 80.19 REMARK 500 LEU A 172 65.44 62.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 578 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B 579 DISTANCE = 5.83 ANGSTROMS DBREF 4PWQ B 18 190 UNP P05067 A4_HUMAN 18 190 DBREF 4PWQ A 18 190 UNP P05067 A4_HUMAN 18 190 SEQADV 4PWQ MET B 17 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ILE B 191 UNP P05067 EXPRESSION TAG SEQADV 4PWQ GLU B 192 UNP P05067 EXPRESSION TAG SEQADV 4PWQ GLY B 193 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ARG B 194 UNP P05067 EXPRESSION TAG SEQADV 4PWQ LYS B 195 UNP P05067 EXPRESSION TAG SEQADV 4PWQ LEU B 196 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ALA B 197 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ALA B 198 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ALA B 199 UNP P05067 EXPRESSION TAG SEQADV 4PWQ LEU B 200 UNP P05067 EXPRESSION TAG SEQADV 4PWQ GLU B 201 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS B 202 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS B 203 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS B 204 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS B 205 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS B 206 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS B 207 UNP P05067 EXPRESSION TAG SEQADV 4PWQ MET A 17 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ILE A 191 UNP P05067 EXPRESSION TAG SEQADV 4PWQ GLU A 192 UNP P05067 EXPRESSION TAG SEQADV 4PWQ GLY A 193 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ARG A 194 UNP P05067 EXPRESSION TAG SEQADV 4PWQ LYS A 195 UNP P05067 EXPRESSION TAG SEQADV 4PWQ LEU A 196 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ALA A 197 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ALA A 198 UNP P05067 EXPRESSION TAG SEQADV 4PWQ ALA A 199 UNP P05067 EXPRESSION TAG SEQADV 4PWQ LEU A 200 UNP P05067 EXPRESSION TAG SEQADV 4PWQ GLU A 201 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS A 202 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS A 203 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS A 204 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS A 205 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS A 206 UNP P05067 EXPRESSION TAG SEQADV 4PWQ HIS A 207 UNP P05067 EXPRESSION TAG SEQRES 1 B 191 MET LEU GLU VAL PRO THR ASP GLY ASN ALA GLY LEU LEU SEQRES 2 B 191 ALA GLU PRO GLN ILE ALA MET PHE CYS GLY ARG LEU ASN SEQRES 3 B 191 MET HIS MET ASN VAL GLN ASN GLY LYS TRP ASP SER ASP SEQRES 4 B 191 PRO SER GLY THR LYS THR CYS ILE ASP THR LYS GLU GLY SEQRES 5 B 191 ILE LEU GLN TYR CYS GLN GLU VAL TYR PRO GLU LEU GLN SEQRES 6 B 191 ILE THR ASN VAL VAL GLU ALA ASN GLN PRO VAL THR ILE SEQRES 7 B 191 GLN ASN TRP CYS LYS ARG GLY ARG LYS GLN CYS LYS THR SEQRES 8 B 191 HIS PRO HIS PHE VAL ILE PRO TYR ARG CYS LEU VAL GLY SEQRES 9 B 191 GLU PHE VAL SER ASP ALA LEU LEU VAL PRO ASP LYS CYS SEQRES 10 B 191 LYS PHE LEU HIS GLN GLU ARG MET ASP VAL CYS GLU THR SEQRES 11 B 191 HIS LEU HIS TRP HIS THR VAL ALA LYS GLU THR CYS SER SEQRES 12 B 191 GLU LYS SER THR ASN LEU HIS ASP TYR GLY MET LEU LEU SEQRES 13 B 191 PRO CYS GLY ILE ASP LYS PHE ARG GLY VAL GLU PHE VAL SEQRES 14 B 191 CYS CYS PRO LEU ALA ILE GLU GLY ARG LYS LEU ALA ALA SEQRES 15 B 191 ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 A 191 MET LEU GLU VAL PRO THR ASP GLY ASN ALA GLY LEU LEU SEQRES 2 A 191 ALA GLU PRO GLN ILE ALA MET PHE CYS GLY ARG LEU ASN SEQRES 3 A 191 MET HIS MET ASN VAL GLN ASN GLY LYS TRP ASP SER ASP SEQRES 4 A 191 PRO SER GLY THR LYS THR CYS ILE ASP THR LYS GLU GLY SEQRES 5 A 191 ILE LEU GLN TYR CYS GLN GLU VAL TYR PRO GLU LEU GLN SEQRES 6 A 191 ILE THR ASN VAL VAL GLU ALA ASN GLN PRO VAL THR ILE SEQRES 7 A 191 GLN ASN TRP CYS LYS ARG GLY ARG LYS GLN CYS LYS THR SEQRES 8 A 191 HIS PRO HIS PHE VAL ILE PRO TYR ARG CYS LEU VAL GLY SEQRES 9 A 191 GLU PHE VAL SER ASP ALA LEU LEU VAL PRO ASP LYS CYS SEQRES 10 A 191 LYS PHE LEU HIS GLN GLU ARG MET ASP VAL CYS GLU THR SEQRES 11 A 191 HIS LEU HIS TRP HIS THR VAL ALA LYS GLU THR CYS SER SEQRES 12 A 191 GLU LYS SER THR ASN LEU HIS ASP TYR GLY MET LEU LEU SEQRES 13 A 191 PRO CYS GLY ILE ASP LYS PHE ARG GLY VAL GLU PHE VAL SEQRES 14 A 191 CYS CYS PRO LEU ALA ILE GLU GLY ARG LYS LEU ALA ALA SEQRES 15 A 191 ALA LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *624(H2 O) HELIX 1 1 THR B 65 TYR B 77 1 13 HELIX 2 2 HIS B 147 LYS B 161 1 15 HELIX 3 3 THR A 65 TYR A 77 1 13 HELIX 4 4 HIS A 147 GLU A 160 1 14 SHEET 1 A 5 LYS B 51 SER B 54 0 SHEET 2 A 5 MET B 43 ASN B 46 -1 N HIS B 44 O ASP B 53 SHEET 3 A 5 GLN B 33 ALA B 35 -1 N ALA B 35 O MET B 43 SHEET 4 A 5 TYR B 115 VAL B 119 -1 O TYR B 115 N ILE B 34 SHEET 5 A 5 ILE B 82 GLU B 87 -1 N VAL B 86 O ARG B 116 SHEET 1 B 2 VAL B 92 ILE B 94 0 SHEET 2 B 2 HIS B 110 VAL B 112 -1 O VAL B 112 N VAL B 92 SHEET 1 C 3 LYS B 134 GLU B 139 0 SHEET 2 C 3 LYS B 178 PRO B 188 -1 O PHE B 184 N LEU B 136 SHEET 3 C 3 GLU B 145 THR B 146 -1 N GLU B 145 O PHE B 179 SHEET 1 D 3 LYS B 134 GLU B 139 0 SHEET 2 D 3 LYS B 178 PRO B 188 -1 O PHE B 184 N LEU B 136 SHEET 3 D 3 THR B 163 GLY B 175 -1 N ASN B 164 O CYS B 187 SHEET 1 E 5 TRP A 52 SER A 54 0 SHEET 2 E 5 MET A 43 MET A 45 -1 N HIS A 44 O ASP A 53 SHEET 3 E 5 GLN A 33 ALA A 35 -1 N ALA A 35 O MET A 43 SHEET 4 E 5 TYR A 115 VAL A 119 -1 O TYR A 115 N ILE A 34 SHEET 5 E 5 ILE A 82 GLU A 87 -1 N VAL A 86 O ARG A 116 SHEET 1 F 2 VAL A 92 ILE A 94 0 SHEET 2 F 2 HIS A 110 VAL A 112 -1 O VAL A 112 N VAL A 92 SHEET 1 G 3 LYS A 134 GLU A 139 0 SHEET 2 G 3 LYS A 178 PRO A 188 -1 O PHE A 184 N LEU A 136 SHEET 3 G 3 GLU A 145 THR A 146 -1 N GLU A 145 O PHE A 179 SHEET 1 H 3 LYS A 134 GLU A 139 0 SHEET 2 H 3 LYS A 178 PRO A 188 -1 O PHE A 184 N LEU A 136 SHEET 3 H 3 THR A 163 GLY A 175 -1 N ASN A 164 O CYS A 187 SSBOND 1 CYS B 38 CYS B 62 1555 1555 2.03 SSBOND 2 CYS B 73 CYS B 117 1555 1555 2.04 SSBOND 3 CYS B 133 CYS B 187 1555 1555 2.03 SSBOND 4 CYS B 144 CYS B 174 1555 1555 2.04 SSBOND 5 CYS B 158 CYS B 186 1555 1555 2.03 SSBOND 6 CYS A 38 CYS A 62 1555 1555 2.04 SSBOND 7 CYS A 73 CYS A 117 1555 1555 2.03 SSBOND 8 CYS A 98 CYS A 105 1555 1555 2.03 SSBOND 9 CYS A 133 CYS A 187 1555 1555 2.04 SSBOND 10 CYS A 144 CYS A 174 1555 1555 2.04 SSBOND 11 CYS A 158 CYS A 186 1555 1555 2.03 CRYST1 91.400 91.400 80.016 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010941 0.006317 0.000000 0.00000 SCALE2 0.000000 0.012633 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012498 0.00000