PDB Short entry for 4Q65
HEADER    TRANSPORT PROTEIN                       21-APR-14   4Q65              
TITLE     STRUCTURE OF THE E. COLI PEPTIDE TRANSPORTER YBGH                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DIPEPTIDE PERMEASE D;                                      
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;                               
SOURCE   3 ORGANISM_TAXID: 83333;                                               
SOURCE   4 STRAIN: K12;                                                         
SOURCE   5 GENE: DTPD, YBGH, B0709, JW0699;                                     
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    MFS FOLD MOTIF A, PEPTIDE TRANSPORTER, TRANSPORT PROTEIN              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    C.ZHANG,Y.ZHAO,G.MAO,M.LIU,X.WANG                                     
REVDAT   2   24-AUG-22 4Q65    1       JRNL   SEQADV                            
REVDAT   1   13-AUG-14 4Q65    0                                                
JRNL        AUTH   Y.ZHAO,G.MAO,M.LIU,L.ZHANG,X.WANG,X.C.ZHANG                  
JRNL        TITL   CRYSTAL STRUCTURE OF THE E. COLI PEPTIDE TRANSPORTER YBGH.   
JRNL        REF    STRUCTURE                     V.  22  1152 2014              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   25066136                                                     
JRNL        DOI    10.1016/J.STR.2014.06.008                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    3.40 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE: 1.8_1069)                     
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 44.54                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.330                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 74.2                           
REMARK   3   NUMBER OF REFLECTIONS             : 9105                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.260                           
REMARK   3   R VALUE            (WORKING SET) : 0.258                           
REMARK   3   FREE R VALUE                     : 0.316                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.820                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 753                             
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 44.5435 -  5.8106    0.91     3648   172  0.2425 0.3010        
REMARK   3     2  5.8106 -  4.6136    0.94     3778   193  0.2632 0.3101        
REMARK   3     3  4.6136 -  4.0309    0.75     2983   145  0.2430 0.3099        
REMARK   3     4  4.0309 -  3.6625    0.61     2422   120  0.3046 0.3598        
REMARK   3     5  3.6625 -  3.4000    0.51     2023   123  0.3355 0.3971        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 0.60                                          
REMARK   3   SHRINKAGE RADIUS   : 0.00                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.560            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 39.360           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.007           3447                                  
REMARK   3   ANGLE     :  1.273           4687                                  
REMARK   3   CHIRALITY :  0.097            550                                  
REMARK   3   PLANARITY :  0.006            564                                  
REMARK   3   DIHEDRAL  : 16.967           1158                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 1                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN A                                                
REMARK   3    ORIGIN FOR THE GROUP (A): 190.9846  27.9697  99.3857              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.4793 T22:   0.5605                                     
REMARK   3      T33:   0.5548 T12:  -0.0109                                     
REMARK   3      T13:  -0.0468 T23:  -0.0885                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.7207 L22:   5.3523                                     
REMARK   3      L33:   2.9230 L12:   0.5721                                     
REMARK   3      L13:   0.4732 L23:  -0.1811                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.1840 S12:   0.6597 S13:  -0.0367                       
REMARK   3      S21:  -0.0923 S22:   0.0201 S23:  -0.2001                       
REMARK   3      S31:   0.0874 S32:   0.3984 S33:   0.1438                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: SF FILE CONTAINS FRIEDEL PAIRS UNDER      
REMARK   3  I/F_MINUS AND I/F_PLUS COLUMNS.                                     
REMARK   4                                                                      
REMARK   4 4Q65 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-APR-14.                  
REMARK 100 THE DEPOSITION ID IS D_1000085652.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 12-APR-12; NULL; NULL              
REMARK 200  TEMPERATURE           (KELVIN) : 100; NULL; NULL                    
REMARK 200  PH                             : 5.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 3                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y; Y; Y                            
REMARK 200  RADIATION SOURCE               : PHOTON FACTORY; SSRF; SPRING-8     
REMARK 200  BEAMLINE                       : BL-17A; BL17U; BL41XU              
REMARK 200  X-RAY GENERATOR MODEL          : NULL; NULL; NULL                   
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M; NULL; NULL                      
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9788; 1; 1.006                   
REMARK 200  MONOCHROMATOR                  : GRAPHITE; NULL; NULL               
REMARK 200  OPTICS                         : NULL; NULL; NULL                   
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD; NULL; NULL                    
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315; NULL; NULL       
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 9105                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 3.400                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 72.0                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 3.70                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 45.3                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL; NULL                  
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD                          
REMARK 200 SOFTWARE USED: SHELXS                                                
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS.    
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 66.21                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM NAAC (PH 5.0), 25%(V/V) PEG400,     
REMARK 280  50MM MG(AC)2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K       
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2                        
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z                                                 
REMARK 290       3555   -X+1/2,Y+1/2,-Z                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000       47.01750            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       54.72400            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       47.01750            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       54.72400            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     ASN A     2                                                      
REMARK 465     LYS A     3                                                      
REMARK 465     HIS A     4                                                      
REMARK 465     ALA A     5                                                      
REMARK 465     ASN A   199                                                      
REMARK 465     LYS A   200                                                      
REMARK 465     LYS A   201                                                      
REMARK 465     VAL A   202                                                      
REMARK 465     LEU A   203                                                      
REMARK 465     ARG A   256                                                      
REMARK 465     LYS A   257                                                      
REMARK 465     ALA A   258                                                      
REMARK 465     LYS A   265                                                      
REMARK 465     ARG A   301                                                      
REMARK 465     ASP A   302                                                      
REMARK 465     MET A   303                                                      
REMARK 465     PHE A   304                                                      
REMARK 465     GLY A   305                                                      
REMARK 465     TYR A   306                                                      
REMARK 465     LYS A   333                                                      
REMARK 465     GLU A   334                                                      
REMARK 465     SER A   335                                                      
REMARK 465     VAL A   336                                                      
REMARK 465     ALA A   337                                                      
REMARK 465     GLY A   338                                                      
REMARK 465     HIS A   374                                                      
REMARK 465     SER A   375                                                      
REMARK 465     SER A   376                                                      
REMARK 465     ILE A   407                                                      
REMARK 465     PRO A   408                                                      
REMARK 465     GLY A   409                                                      
REMARK 465     GLN A   439                                                      
REMARK 465     ALA A   440                                                      
REMARK 465     SER A   441                                                      
REMARK 465     PHE A   442                                                      
REMARK 465     ASP A   443                                                      
REMARK 465     ALA A   444                                                      
REMARK 465     SER A   445                                                      
REMARK 465     GLY A   446                                                      
REMARK 465     ALA A   447                                                      
REMARK 465     ILE A   448                                                      
REMARK 465     ASN A   449                                                      
REMARK 465     TYR A   450                                                      
REMARK 465     LEU A   482                                                      
REMARK 465     LYS A   483                                                      
REMARK 465     PHE A   484                                                      
REMARK 465     ARG A   485                                                      
REMARK 465     ASN A   486                                                      
REMARK 465     ARG A   487                                                      
REMARK 465     ALA A   488                                                      
REMARK 465     LEU A   489                                                      
REMARK 465     ALA A   490                                                      
REMARK 465     LEU A   491                                                      
REMARK 465     GLU A   492                                                      
REMARK 465     SER A   493                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     THR A 193    OG1  CG2                                            
REMARK 470     LYS A 233    CG   CD   CE   NZ                                   
REMARK 470     GLU A 234    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 259    CG   CD   OE1  OE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    LEU A   220     OG1  THR A   223              2.16            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LEU A  40      -52.96   -143.99                                   
REMARK 500    LYS A  41       -1.67     92.78                                   
REMARK 500    ILE A  63      -71.08    -58.14                                   
REMARK 500    LYS A  71      -72.70   -102.90                                   
REMARK 500    VAL A  72      -62.31    -92.51                                   
REMARK 500    HIS A  99      153.81     68.58                                   
REMARK 500    SER A 101      -61.04   -125.43                                   
REMARK 500    LYS A 118      -73.15    -58.68                                   
REMARK 500    PRO A 131       48.98    -85.79                                   
REMARK 500    THR A 132      -55.87   -129.19                                   
REMARK 500    GLN A 162      -71.98    -60.71                                   
REMARK 500    TYR A 165      -77.41   -124.27                                   
REMARK 500    SER A 166      168.27    177.63                                   
REMARK 500    ARG A 190       -1.76     87.93                                   
REMARK 500    THR A 193       -8.66     90.29                                   
REMARK 500    HIS A 194       76.59     46.00                                   
REMARK 500    ARG A 196     -174.17   -173.63                                   
REMARK 500    ALA A 205      -80.66   -101.17                                   
REMARK 500    ASN A 207      -70.54    -74.98                                   
REMARK 500    PRO A 211     -164.53    -79.22                                   
REMARK 500    LEU A 220      -70.97    -50.75                                   
REMARK 500    LYS A 233      -14.92     66.27                                   
REMARK 500    ASN A 260      -77.90    -87.50                                   
REMARK 500    GLN A 261       -0.89     67.51                                   
REMARK 500    LYS A 262     -123.70     64.85                                   
REMARK 500    THR A 310     -119.54     66.15                                   
REMARK 500    ALA A 311       -9.59    -58.36                                   
REMARK 500    THR A 341      -74.08    -97.75                                   
REMARK 500    TRP A 345      -71.14    -43.31                                   
REMARK 500    ALA A 370      -73.78   -115.05                                   
REMARK 500    ASP A 395       47.64   -154.43                                   
REMARK 500    LEU A 420      -70.90    -58.93                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 ILE A  394     ASP A  395                  105.31                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  4Q65 A    1   493  UNP    P75742   DTPD_ECOLI       1    493             
SEQADV 4Q65 VAL A  472  UNP  P75742    LEU   472 ENGINEERED MUTATION            
SEQRES   1 A  493  MET ASN LYS HIS ALA SER GLN PRO ARG ALA ILE TYR TYR          
SEQRES   2 A  493  VAL VAL ALA LEU GLN ILE TRP GLU TYR PHE SER PHE TYR          
SEQRES   3 A  493  GLY MET ARG ALA LEU LEU ILE LEU TYR LEU THR ASN GLN          
SEQRES   4 A  493  LEU LYS TYR ASN ASP THR HIS ALA TYR GLU LEU PHE SER          
SEQRES   5 A  493  ALA TYR CYS SER LEU VAL TYR VAL THR PRO ILE LEU GLY          
SEQRES   6 A  493  GLY PHE LEU ALA ASP LYS VAL LEU GLY ASN ARG MET ALA          
SEQRES   7 A  493  VAL MET LEU GLY ALA LEU LEU MET ALA ILE GLY HIS VAL          
SEQRES   8 A  493  VAL LEU GLY ALA SER GLU ILE HIS PRO SER PHE LEU TYR          
SEQRES   9 A  493  LEU SER LEU ALA ILE ILE VAL CYS GLY TYR GLY LEU PHE          
SEQRES  10 A  493  LYS SER ASN VAL SER CYS LEU LEU GLY GLU LEU TYR GLU          
SEQRES  11 A  493  PRO THR ASP PRO ARG ARG ASP GLY GLY PHE SER LEU MET          
SEQRES  12 A  493  TYR ALA ALA GLY ASN VAL GLY SER ILE ILE ALA PRO ILE          
SEQRES  13 A  493  ALA CYS GLY TYR ALA GLN GLU GLU TYR SER TRP ALA MET          
SEQRES  14 A  493  GLY PHE GLY LEU ALA ALA VAL GLY MET ILE ALA GLY LEU          
SEQRES  15 A  493  VAL ILE PHE LEU CYS GLY ASN ARG HIS PHE THR HIS THR          
SEQRES  16 A  493  ARG GLY VAL ASN LYS LYS VAL LEU ARG ALA THR ASN PHE          
SEQRES  17 A  493  LEU LEU PRO ASN TRP GLY TRP LEU LEU VAL LEU LEU VAL          
SEQRES  18 A  493  ALA THR PRO ALA LEU ILE THR ILE LEU PHE TRP LYS GLU          
SEQRES  19 A  493  TRP SER VAL TYR ALA LEU ILE VAL ALA THR ILE ILE GLY          
SEQRES  20 A  493  LEU GLY VAL LEU ALA LYS ILE TYR ARG LYS ALA GLU ASN          
SEQRES  21 A  493  GLN LYS GLN ARG LYS GLU LEU GLY LEU ILE VAL THR LEU          
SEQRES  22 A  493  THR PHE PHE SER MET LEU PHE TRP ALA PHE ALA GLN GLN          
SEQRES  23 A  493  GLY GLY SER SER ILE SER LEU TYR ILE ASP ARG PHE VAL          
SEQRES  24 A  493  ASN ARG ASP MET PHE GLY TYR THR VAL PRO THR ALA MET          
SEQRES  25 A  493  PHE GLN SER ILE ASN ALA PHE ALA VAL MET LEU CYS GLY          
SEQRES  26 A  493  VAL PHE LEU ALA TRP VAL VAL LYS GLU SER VAL ALA GLY          
SEQRES  27 A  493  ASN ARG THR VAL ARG ILE TRP GLY LYS PHE ALA LEU GLY          
SEQRES  28 A  493  LEU GLY LEU MET SER ALA GLY PHE CYS ILE LEU THR LEU          
SEQRES  29 A  493  SER ALA ARG TRP SER ALA MET TYR GLY HIS SER SER LEU          
SEQRES  30 A  493  PRO LEU MET VAL LEU GLY LEU ALA VAL MET GLY PHE ALA          
SEQRES  31 A  493  GLU LEU PHE ILE ASP PRO VAL ALA MET SER GLN ILE THR          
SEQRES  32 A  493  ARG ILE GLU ILE PRO GLY VAL THR GLY VAL LEU THR GLY          
SEQRES  33 A  493  ILE TYR MET LEU LEU SER GLY ALA ILE ALA ASN TYR LEU          
SEQRES  34 A  493  ALA GLY VAL ILE ALA ASP GLN THR SER GLN ALA SER PHE          
SEQRES  35 A  493  ASP ALA SER GLY ALA ILE ASN TYR SER ILE ASN ALA TYR          
SEQRES  36 A  493  ILE GLU VAL PHE ASP GLN ILE THR TRP GLY ALA LEU ALA          
SEQRES  37 A  493  CYS VAL GLY VAL VAL LEU MET ILE TRP LEU TYR GLN ALA          
SEQRES  38 A  493  LEU LYS PHE ARG ASN ARG ALA LEU ALA LEU GLU SER              
HELIX    1   1 PRO A    8  GLN A   39  1                                  32    
HELIX    2   2 ASN A   43  THR A   61  1                                  19    
HELIX    3   3 THR A   61  VAL A   72  1                                  12    
HELIX    4   4 ARG A   76  LEU A   93  1                                  18    
HELIX    5   5 SER A  101  GLU A  127  1                                  27    
HELIX    6   6 PRO A  134  GLU A  163  1                                  30    
HELIX    7   7 SER A  166  CYS A  187  1                                  22    
HELIX    8   8 PRO A  211  LYS A  233  1                                  23    
HELIX    9   9 LYS A  233  TYR A  255  1                                  23    
HELIX   10  10 LEU A  267  PHE A  298  1                                  32    
HELIX   11  11 PRO A  309  MET A  312  5                                   4    
HELIX   12  12 PHE A  313  VAL A  332  1                                  20    
HELIX   13  13 THR A  341  ALA A  370  1                                  30    
HELIX   14  14 PRO A  378  ILE A  394  1                                  17    
HELIX   15  15 PRO A  396  ARG A  404  1                                   9    
HELIX   16  16 THR A  411  SER A  438  1                                  28    
HELIX   17  17 ILE A  452  ALA A  481  1                                  30    
CRYST1   94.035  109.448   76.659  90.00  90.00  90.00 P 21 21 2     4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010634  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.009137  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013045        0.00000