PDB Short entry for 4R4M HEADER DNA BINDING PROTEIN 19-AUG-14 4R4M TITLE CRYSTAL STRUCTURE OF C42L CGMP DEPENDENT PROTEIN KINASE I ALPHA (PKGI TITLE 2 ALPHA) LEUCINE ZIPPER COMPND MOL_ID: 1; COMPND 2 MOLECULE: CGMP-DEPENDENT PROTEIN KINASE 1; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: ALPHA LEUCINE ZIPPER, UNP RESIDUES 2-48; COMPND 5 SYNONYM: CGK 1, CGK1, CGMP-DEPENDENT PROTEIN KINASE I, CGKI; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PRKG1, PRKG1B, PRKGR1A, PRKGR1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LEUCINE ZIPPER, KINASE, BINDING DOMAIN, MYPT1, RHOA, DNA BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.S.REGER,E.GUO,M.P.YANG,L.QIN,C.KIM REVDAT 4 03-APR-24 4R4M 1 REMARK REVDAT 3 28-FEB-24 4R4M 1 REMARK SEQADV REVDAT 2 22-NOV-17 4R4M 1 REMARK REVDAT 1 23-SEP-15 4R4M 0 JRNL AUTH L.QIN,A.S.REGER,E.GUO,M.P.YANG,P.ZWART,D.E.CASTEEL,C.KIM JRNL TITL STRUCTURES OF CGMP-DEPENDENT PROTEIN KINASE (PKG) I ALPHA JRNL TITL 2 LEUCINE ZIPPERS REVEAL AN INTERCHAIN DISULFIDE BOND JRNL TITL 3 IMPORTANT FOR DIMER STABILITY. JRNL REF BIOCHEMISTRY V. 54 4419 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 26132214 JRNL DOI 10.1021/ACS.BIOCHEM.5B00572 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13609 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1359 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.9210 - 4.1141 0.99 1331 149 0.2043 0.2488 REMARK 3 2 4.1141 - 3.2768 1.00 1258 138 0.2004 0.2296 REMARK 3 3 3.2768 - 2.8660 1.00 1234 138 0.2427 0.2919 REMARK 3 4 2.8660 - 2.6054 1.00 1228 136 0.2467 0.2938 REMARK 3 5 2.6054 - 2.4195 1.00 1213 135 0.2272 0.2966 REMARK 3 6 2.4195 - 2.2774 1.00 1198 132 0.2174 0.2633 REMARK 3 7 2.2774 - 2.1637 1.00 1215 134 0.2262 0.2805 REMARK 3 8 2.1637 - 2.0698 1.00 1194 132 0.2374 0.2677 REMARK 3 9 2.0698 - 1.9903 1.00 1196 133 0.2571 0.3105 REMARK 3 10 1.9903 - 1.9218 1.00 1183 132 0.2733 0.3393 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1163 REMARK 3 ANGLE : 0.714 1551 REMARK 3 CHIRALITY : 0.036 182 REMARK 3 PLANARITY : 0.002 200 REMARK 3 DIHEDRAL : 14.889 481 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.2884 113.7747 4.8997 REMARK 3 T TENSOR REMARK 3 T11: 0.3166 T22: 0.2705 REMARK 3 T33: 0.3355 T12: -0.0090 REMARK 3 T13: -0.0080 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.1526 L22: 8.1995 REMARK 3 L33: 1.7385 L12: 0.4635 REMARK 3 L13: 0.4302 L23: 3.0568 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: 0.0216 S13: 0.0796 REMARK 3 S21: 0.8373 S22: 0.3008 S23: -0.8275 REMARK 3 S31: 0.2732 S32: 0.1944 S33: -0.2036 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8180 115.1285 -0.7340 REMARK 3 T TENSOR REMARK 3 T11: 0.2688 T22: 0.2353 REMARK 3 T33: 0.3123 T12: 0.0309 REMARK 3 T13: 0.0301 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.0219 L22: 5.6597 REMARK 3 L33: 1.5809 L12: 2.0773 REMARK 3 L13: 0.7274 L23: 2.4579 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.0074 S13: 0.2015 REMARK 3 S21: -0.1042 S22: -0.1289 S23: 0.1655 REMARK 3 S31: -0.0153 S32: -0.0696 S33: 0.0840 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID -1 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.1332 121.6932 3.4110 REMARK 3 T TENSOR REMARK 3 T11: 0.5261 T22: 0.2045 REMARK 3 T33: 0.3059 T12: 0.0443 REMARK 3 T13: -0.0549 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.2818 L22: 9.4387 REMARK 3 L33: 0.1203 L12: -0.9907 REMARK 3 L13: -0.1795 L23: 0.4418 REMARK 3 S TENSOR REMARK 3 S11: -0.2434 S12: -0.1084 S13: 0.1150 REMARK 3 S21: 0.6667 S22: 0.2598 S23: 0.2703 REMARK 3 S31: -0.2078 S32: -0.0142 S33: -0.0113 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4R4M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086892. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.115869 REMARK 200 MONOCHROMATOR : KHOZU DOUBLE FLAT CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13609 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.922 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: WT PKGI ALPHA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG 400, 200 MM LITHIUM SULFATE, REMARK 280 0.1 M TRIS BASE/ HYDROCHLORIC ACID, PH 8.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.53667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.26833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 42.53667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.26833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 42.53667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 21.26833 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 42.53667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.26833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -95.92600 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 1 OG REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 MET A 12 SD CE REMARK 470 LYS A 19 CG CD CE NZ REMARK 470 GLU A 20 CG CD OE1 OE2 REMARK 470 GLN A 33 CG CD OE1 NE2 REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 LYS B 19 NZ REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 GLU C 2 CG CD OE1 OE2 REMARK 470 LYS C 19 CG CD CE NZ REMARK 470 LYS C 23 CG CD CE NZ REMARK 470 GLN C 33 CG CD OE1 NE2 REMARK 470 GLU C 34 CG CD OE1 OE2 REMARK 470 LYS C 38 CG CD CE NZ REMARK 470 HIS C 40 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 16 O HOH B 231 2.14 REMARK 500 O HOH B 201 O HOH C 107 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 212 O HOH B 212 7464 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SO4 B 101 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NMD RELATED DB: PDB REMARK 900 PKGI BETA LEUCINE ZIPPER REMARK 900 RELATED ID: 1ZXA RELATED DB: PDB REMARK 900 PKGI ALPHA LEUCINE ZIPPER (NMR) REMARK 900 RELATED ID: 4OJK RELATED DB: PDB REMARK 900 PKGII LEUCINE ZIPPER COMPLEXED WITH RAB11B REMARK 900 RELATED ID: 4R4L RELATED DB: PDB DBREF 4R4M A 1 47 UNP Q13976 KGP1_HUMAN 2 48 DBREF 4R4M B 1 47 UNP Q13976 KGP1_HUMAN 2 48 DBREF 4R4M C 1 47 UNP Q13976 KGP1_HUMAN 2 48 SEQADV 4R4M GLY A -1 UNP Q13976 EXPRESSION TAG SEQADV 4R4M SER A 0 UNP Q13976 EXPRESSION TAG SEQADV 4R4M LEU A 42 UNP Q13976 CYS 43 ENGINEERED MUTATION SEQADV 4R4M GLY B -1 UNP Q13976 EXPRESSION TAG SEQADV 4R4M SER B 0 UNP Q13976 EXPRESSION TAG SEQADV 4R4M LEU B 42 UNP Q13976 CYS 43 ENGINEERED MUTATION SEQADV 4R4M GLY C -1 UNP Q13976 EXPRESSION TAG SEQADV 4R4M SER C 0 UNP Q13976 EXPRESSION TAG SEQADV 4R4M LEU C 42 UNP Q13976 CYS 43 ENGINEERED MUTATION SEQRES 1 A 49 GLY SER SER GLU LEU GLU GLU ASP PHE ALA LYS ILE LEU SEQRES 2 A 49 MET LEU LYS GLU GLU ARG ILE LYS GLU LEU GLU LYS ARG SEQRES 3 A 49 LEU SER GLU LYS GLU GLU GLU ILE GLN GLU LEU LYS ARG SEQRES 4 A 49 LYS LEU HIS LYS LEU GLN SER VAL LEU PRO SEQRES 1 B 49 GLY SER SER GLU LEU GLU GLU ASP PHE ALA LYS ILE LEU SEQRES 2 B 49 MET LEU LYS GLU GLU ARG ILE LYS GLU LEU GLU LYS ARG SEQRES 3 B 49 LEU SER GLU LYS GLU GLU GLU ILE GLN GLU LEU LYS ARG SEQRES 4 B 49 LYS LEU HIS LYS LEU GLN SER VAL LEU PRO SEQRES 1 C 49 GLY SER SER GLU LEU GLU GLU ASP PHE ALA LYS ILE LEU SEQRES 2 C 49 MET LEU LYS GLU GLU ARG ILE LYS GLU LEU GLU LYS ARG SEQRES 3 C 49 LEU SER GLU LYS GLU GLU GLU ILE GLN GLU LEU LYS ARG SEQRES 4 C 49 LYS LEU HIS LYS LEU GLN SER VAL LEU PRO HET SO4 B 101 1 HETNAM SO4 SULFATE ION FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *70(H2 O) HELIX 1 1 SER A 1 SER A 44 1 44 HELIX 2 2 GLU B 2 LEU B 46 1 45 HELIX 3 3 SER C 0 VAL C 45 1 46 SITE 1 AC1 1 MET B 12 CRYST1 95.926 95.926 63.805 90.00 90.00 120.00 P 62 2 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010425 0.006019 0.000000 0.00000 SCALE2 0.000000 0.012037 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015673 0.00000