PDB Short entry for 4TMP HEADER TRANSCRIPTION 02-JUN-14 4TMP TITLE CRYSTAL STRUCTURE OF AF9 YEATS BOUND TO H3K9AC PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN AF-9; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: YEATS DOMAIN (UNP RESIDUES 1-138); COMPND 5 SYNONYM: ALL1-FUSED GENE FROM CHROMOSOME 9 PROTEIN,MYELOID/LYMPHOID COMPND 6 OR MIXED-LINEAGE LEUKEMIA TRANSLOCATED TO CHROMOSOME 3 PROTEIN,YEATS COMPND 7 DOMAIN-CONTAINING PROTEIN 3; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: ALA-ARG-THR-LYS-GLN-THR-ALA-ARG-ALY-SER-THR; COMPND 11 CHAIN: B, D; COMPND 12 FRAGMENT: UNP RESIDUES 2-12; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MLLT3, AF9, YEATS3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS TRANSCRIPTION, COMPLEX, HISTONE MODIFICATION, IMMUNOGLOBIN FOLD EXPDTA X-RAY DIFFRACTION AUTHOR H.LI,Y.LI,H.WANG,Y.REN REVDAT 7 15-NOV-23 4TMP 1 ATOM REVDAT 6 27-SEP-23 4TMP 1 REMARK REVDAT 5 08-JAN-20 4TMP 1 REMARK REVDAT 4 17-APR-19 4TMP 1 REMARK REVDAT 3 22-NOV-17 4TMP 1 SOURCE REMARK REVDAT 2 31-DEC-14 4TMP 1 JRNL REVDAT 1 05-NOV-14 4TMP 0 JRNL AUTH Y.LI,H.WEN,Y.XI,K.TANAKA,H.WANG,D.PENG,Y.REN,Q.JIN,S.Y.DENT, JRNL AUTH 2 W.LI,H.LI,X.SHI JRNL TITL AF9 YEATS DOMAIN LINKS HISTONE ACETYLATION TO DOT1L-MEDIATED JRNL TITL 2 H3K79 METHYLATION. JRNL REF CELL V. 159 558 2014 JRNL REFN ISSN 1097-4172 JRNL PMID 25417107 JRNL DOI 10.1016/J.CELL.2014.09.049 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1046 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.0000 - 4.3909 1.00 2921 160 0.1485 0.2180 REMARK 3 2 4.3909 - 3.4855 1.00 2815 136 0.1405 0.2029 REMARK 3 3 3.4855 - 3.0450 1.00 2738 148 0.1664 0.2399 REMARK 3 4 3.0450 - 2.7666 1.00 2772 147 0.1830 0.2501 REMARK 3 5 2.7666 - 2.5683 1.00 2728 154 0.1982 0.2292 REMARK 3 6 2.5683 - 2.4169 1.00 2728 152 0.1906 0.2708 REMARK 3 7 2.4169 - 2.2959 0.99 2694 149 0.1925 0.2565 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 2533 REMARK 3 ANGLE : 1.271 3405 REMARK 3 CHIRALITY : 0.057 349 REMARK 3 PLANARITY : 0.008 444 REMARK 3 DIHEDRAL : 13.896 971 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4TMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000201873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-13; 13-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 110; 110 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N REMARK 200 RADIATION SOURCE : SSRF; NULL REMARK 200 BEAMLINE : BL17U; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793; NULL REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111); NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; ADSC QUANTUM REMARK 200 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20468 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.12100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 0.76500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.2.05 REMARK 200 STARTING MODEL: 3FK3 REMARK 200 REMARK 200 REMARK: ROD-LIKE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG4000, 5% 2-PROPANOL, 0.1 M REMARK 280 SODIUM CITRATE TRIBASIC DIHYDRATE, PH 5.6, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.33750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.33750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 21.26850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 97.85200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 21.26850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 97.85200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.33750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 21.26850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 97.85200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.33750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 21.26850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 97.85200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 ALA B 1 REMARK 465 ARG B 2 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 ALA D 1 REMARK 465 ARG D 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR B 11 CA C O CB OG1 CG2 REMARK 470 THR D 11 CA C O CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 316 O HOH C 320 4655 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS C 5 CB CYS C 5 SG -0.120 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 109 131.99 -38.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 203 DBREF 4TMP A 1 138 UNP P42568 AF9_HUMAN 1 138 DBREF 4TMP B 1 11 UNP P84243 H33_HUMAN 2 12 DBREF 4TMP C 1 138 UNP P42568 AF9_HUMAN 1 138 DBREF 4TMP D 1 11 UNP P84243 H33_HUMAN 2 12 SEQADV 4TMP GLY A -2 UNP P42568 EXPRESSION TAG SEQADV 4TMP SER A -1 UNP P42568 EXPRESSION TAG SEQADV 4TMP HIS A 0 UNP P42568 EXPRESSION TAG SEQADV 4TMP GLY C -2 UNP P42568 EXPRESSION TAG SEQADV 4TMP SER C -1 UNP P42568 EXPRESSION TAG SEQADV 4TMP HIS C 0 UNP P42568 EXPRESSION TAG SEQRES 1 A 141 GLY SER HIS MET ALA SER SER CYS ALA VAL GLN VAL LYS SEQRES 2 A 141 LEU GLU LEU GLY HIS ARG ALA GLN VAL ARG LYS LYS PRO SEQRES 3 A 141 THR VAL GLU GLY PHE THR HIS ASP TRP MET VAL PHE VAL SEQRES 4 A 141 ARG GLY PRO GLU HIS SER ASN ILE GLN HIS PHE VAL GLU SEQRES 5 A 141 LYS VAL VAL PHE HIS LEU HIS GLU SER PHE PRO ARG PRO SEQRES 6 A 141 LYS ARG VAL CYS LYS ASP PRO PRO TYR LYS VAL GLU GLU SEQRES 7 A 141 SER GLY TYR ALA GLY PHE ILE LEU PRO ILE GLU VAL TYR SEQRES 8 A 141 PHE LYS ASN LYS GLU GLU PRO ARG LYS VAL ARG PHE ASP SEQRES 9 A 141 TYR ASP LEU PHE LEU HIS LEU GLU GLY HIS PRO PRO VAL SEQRES 10 A 141 ASN HIS LEU ARG CYS GLU LYS LEU THR PHE ASN ASN PRO SEQRES 11 A 141 THR GLU ASP PHE ARG ARG LYS LEU LEU LYS ALA SEQRES 1 B 11 ALA ARG THR LYS GLN THR ALA ARG ALY SER THR SEQRES 1 C 141 GLY SER HIS MET ALA SER SER CYS ALA VAL GLN VAL LYS SEQRES 2 C 141 LEU GLU LEU GLY HIS ARG ALA GLN VAL ARG LYS LYS PRO SEQRES 3 C 141 THR VAL GLU GLY PHE THR HIS ASP TRP MET VAL PHE VAL SEQRES 4 C 141 ARG GLY PRO GLU HIS SER ASN ILE GLN HIS PHE VAL GLU SEQRES 5 C 141 LYS VAL VAL PHE HIS LEU HIS GLU SER PHE PRO ARG PRO SEQRES 6 C 141 LYS ARG VAL CYS LYS ASP PRO PRO TYR LYS VAL GLU GLU SEQRES 7 C 141 SER GLY TYR ALA GLY PHE ILE LEU PRO ILE GLU VAL TYR SEQRES 8 C 141 PHE LYS ASN LYS GLU GLU PRO ARG LYS VAL ARG PHE ASP SEQRES 9 C 141 TYR ASP LEU PHE LEU HIS LEU GLU GLY HIS PRO PRO VAL SEQRES 10 C 141 ASN HIS LEU ARG CYS GLU LYS LEU THR PHE ASN ASN PRO SEQRES 11 C 141 THR GLU ASP PHE ARG ARG LYS LEU LEU LYS ALA SEQRES 1 D 11 ALA ARG THR LYS GLN THR ALA ARG ALY SER THR MODRES 4TMP ALY B 9 LYS MODIFIED RESIDUE MODRES 4TMP ALY D 9 LYS MODIFIED RESIDUE HET ALY B 9 25 HET ALY D 9 25 HET EDO A 201 10 HET EDO C 201 10 HET EDO C 202 10 HET EDO C 203 10 HETNAM ALY N(6)-ACETYLLYSINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ALY 2(C8 H16 N2 O3) FORMUL 5 EDO 4(C2 H6 O2) FORMUL 9 HOH *210(H2 O) HELIX 1 AA1 GLY A 38 SER A 42 5 5 HELIX 2 AA2 ASN A 43 HIS A 46 5 4 HELIX 3 AA3 THR A 128 ALA A 138 1 11 HELIX 4 AA4 GLY C 38 SER C 42 5 5 HELIX 5 AA5 ASN C 43 HIS C 46 5 4 HELIX 6 AA6 THR C 128 ALA C 138 1 11 SHEET 1 AA1 6 TYR A 71 GLY A 77 0 SHEET 2 AA1 6 HIS A 30 ARG A 37 -1 N TRP A 32 O GLU A 75 SHEET 3 AA1 6 SER A 3 VAL A 19 -1 N GLU A 12 O ARG A 37 SHEET 4 AA1 6 SER C 3 VAL C 19 -1 O SER C 4 N GLN A 8 SHEET 5 AA1 6 HIS C 30 ARG C 37 -1 O ARG C 37 N GLU C 12 SHEET 6 AA1 6 TYR C 71 GLY C 77 -1 O GLU C 75 N TRP C 32 SHEET 1 AA2 4 VAL A 114 ASN A 125 0 SHEET 2 AA2 4 SER A 3 VAL A 19 -1 N VAL A 9 O LEU A 122 SHEET 3 AA2 4 SER C 3 VAL C 19 -1 O SER C 4 N GLN A 8 SHEET 4 AA2 4 VAL C 114 ASN C 125 -1 O ARG C 118 N LEU C 13 SHEET 1 AA3 4 LYS A 63 CYS A 66 0 SHEET 2 AA3 4 VAL A 48 HIS A 54 -1 N PHE A 53 O ARG A 64 SHEET 3 AA3 4 PHE A 81 PHE A 89 -1 O PRO A 84 N HIS A 54 SHEET 4 AA3 4 LYS A 97 LEU A 104 -1 O TYR A 102 N LEU A 83 SHEET 1 AA4 4 LYS C 63 CYS C 66 0 SHEET 2 AA4 4 VAL C 48 HIS C 54 -1 N PHE C 53 O ARG C 64 SHEET 3 AA4 4 PHE C 81 PHE C 89 -1 O TYR C 88 N LYS C 50 SHEET 4 AA4 4 LYS C 97 LEU C 104 -1 O TYR C 102 N LEU C 83 LINK C ARG B 8 N ALY B 9 1555 1555 1.33 LINK C ALY B 9 N SER B 10 1555 1555 1.33 LINK C ARG D 8 N ALY D 9 1555 1555 1.32 LINK C ALY D 9 N SER D 10 1555 1555 1.33 CISPEP 1 PRO A 69 PRO A 70 0 -8.95 CISPEP 2 GLU A 94 PRO A 95 0 -11.91 CISPEP 3 PRO C 69 PRO C 70 0 -6.70 CISPEP 4 GLU C 94 PRO C 95 0 -3.72 SITE 1 AC1 1 ARG A 37 SITE 1 AC2 3 HIS C 54 LEU C 55 LYS C 63 SITE 1 AC3 1 GLU C 86 SITE 1 AC4 1 ARG C 37 CRYST1 42.537 195.704 106.675 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023509 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005110 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009374 0.00000