PDB Short entry for 5AKM HEADER HYDROLASE 04-MAR-15 5AKM TITLE THE CRYSTAL STRUCTURE OF I-DMOI G20S IN COMPLEX WITH ITS TARGET DNA IN TITLE 2 THE PRESENCE OF 2MM MG COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMING ENDONUCLEASE I-DMOI; COMPND 3 CHAIN: A, F, K; COMPND 4 EC: 3.1.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*AP)-3'; COMPND 9 CHAIN: B, G, L; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*GP)-3'; COMPND 13 CHAIN: C, H, M; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*CP)-3'; COMPND 17 CHAIN: D, I, N; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*CP)-3'; COMPND 21 CHAIN: E, J, O; COMPND 22 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFUROCOCCUS MOBILIS; SOURCE 3 ORGANISM_TAXID: 2274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET24D; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630; SOURCE 17 MOL_ID: 4; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 20 ORGANISM_TAXID: 32630; SOURCE 21 MOL_ID: 5; SOURCE 22 SYNTHETIC: YES; SOURCE 23 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 24 ORGANISM_TAXID: 32630 KEYWDS HYDROLASE, GENE TARGETING, GENETICS, PROTEIN-DNA INTERACTION, HOMING KEYWDS 2 ENDONUCLEASES, X-RAY CRYSTALLOGRAPHY. EXPDTA X-RAY DIFFRACTION AUTHOR R.MOLINA,M.J.MARCAIDA,P.REDONDO,M.MARENCHINO,M.D'ABRAMO,G.MONTOYA, AUTHOR 2 J.PRIETO REVDAT 4 10-JAN-24 5AKM 1 REMARK LINK REVDAT 3 23-AUG-17 5AKM 1 REMARK REVDAT 2 05-AUG-15 5AKM 1 JRNL REVDAT 1 17-JUN-15 5AKM 0 JRNL AUTH R.MOLINA,M.J.MARCAIDA,P.REDONDO,M.MARENCHINO,P.DUCHATEAU, JRNL AUTH 2 M.D'ABRAMO,G.MONTOYA,J.PRIETO JRNL TITL ENGINEERING A NICKASE ON THE HOMING ENDONUCLEASE I-DMOI JRNL TITL 2 SCAFFOLD. JRNL REF J.BIOL.CHEM. V. 290 18534 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 26045557 JRNL DOI 10.1074/JBC.M115.658666 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 97689 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5371 - 7.4474 0.94 3084 162 0.1381 0.1591 REMARK 3 2 7.4474 - 5.9150 0.96 3208 171 0.1593 0.2049 REMARK 3 3 5.9150 - 5.1684 0.94 3048 160 0.1562 0.1867 REMARK 3 4 5.1684 - 4.6964 0.94 3087 160 0.1471 0.2235 REMARK 3 5 4.6964 - 4.3600 0.96 3155 167 0.1430 0.2182 REMARK 3 6 4.3600 - 4.1031 0.95 3116 163 0.1384 0.1683 REMARK 3 7 4.1031 - 3.8977 0.96 3157 166 0.1573 0.2144 REMARK 3 8 3.8977 - 3.7282 0.96 3181 166 0.1738 0.2343 REMARK 3 9 3.7282 - 3.5847 0.94 3082 159 0.1759 0.2248 REMARK 3 10 3.5847 - 3.4610 0.94 3057 152 0.1616 0.2340 REMARK 3 11 3.4610 - 3.3528 0.96 3090 167 0.1677 0.2334 REMARK 3 12 3.3528 - 3.2570 0.96 3189 169 0.1659 0.2523 REMARK 3 13 3.2570 - 3.1713 0.96 3256 172 0.1848 0.2433 REMARK 3 14 3.1713 - 3.0939 0.96 3148 166 0.1901 0.2307 REMARK 3 15 3.0939 - 3.0236 0.96 3189 169 0.2007 0.2389 REMARK 3 16 3.0236 - 2.9593 0.96 3089 162 0.2153 0.3422 REMARK 3 17 2.9593 - 2.9001 0.97 3215 169 0.2141 0.2610 REMARK 3 18 2.9001 - 2.8454 0.96 3203 171 0.2293 0.3045 REMARK 3 19 2.8454 - 2.7946 0.94 3170 168 0.2321 0.3128 REMARK 3 20 2.7946 - 2.7472 0.94 2995 157 0.2256 0.2568 REMARK 3 21 2.7472 - 2.7029 0.95 3153 169 0.2433 0.3427 REMARK 3 22 2.7029 - 2.6613 0.95 3104 160 0.2457 0.3006 REMARK 3 23 2.6613 - 2.6222 0.96 3160 161 0.2431 0.2794 REMARK 3 24 2.6222 - 2.5853 0.96 3162 165 0.2310 0.2984 REMARK 3 25 2.5853 - 2.5503 0.96 3030 162 0.2324 0.3023 REMARK 3 26 2.5503 - 2.5172 0.96 3245 175 0.2520 0.3116 REMARK 3 27 2.5172 - 2.4857 0.96 3164 166 0.2545 0.2862 REMARK 3 28 2.4857 - 2.4558 0.95 3009 157 0.2678 0.3085 REMARK 3 29 2.4558 - 2.4272 0.95 3258 175 0.2816 0.3536 REMARK 3 30 2.4272 - 2.4000 0.55 1802 97 0.3116 0.3370 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7981 REMARK 3 ANGLE : 1.287 11400 REMARK 3 CHIRALITY : 0.068 1284 REMARK 3 PLANARITY : 0.005 910 REMARK 3 DIHEDRAL : 23.691 3207 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 30.3411 -0.6391 4.7085 REMARK 3 T TENSOR REMARK 3 T11: 0.2861 T22: 0.2123 REMARK 3 T33: 0.3074 T12: -0.0016 REMARK 3 T13: 0.0026 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 0.8698 L22: 0.3953 REMARK 3 L33: 0.2307 L12: 0.0331 REMARK 3 L13: -0.0724 L23: -0.1460 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.0338 S13: 0.0096 REMARK 3 S21: 0.0049 S22: -0.0118 S23: 0.0369 REMARK 3 S31: -0.0599 S32: -0.0534 S33: 0.0132 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5AKM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1290063190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97825 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2VS8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.32500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L, M, N, O REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 HIS A 2 REMARK 465 ASN A 3 REMARK 465 ASN A 4 REMARK 465 GLU A 188 REMARK 465 ALA A 189 REMARK 465 ALA A 190 REMARK 465 ALA A 191 REMARK 465 LEU A 192 REMARK 465 GLU A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 HIS A 197 REMARK 465 HIS A 198 REMARK 465 HIS A 199 REMARK 465 ALA F 1 REMARK 465 HIS F 2 REMARK 465 ASN F 3 REMARK 465 ASN F 4 REMARK 465 GLU F 5 REMARK 465 SER F 180 REMARK 465 HIS F 181 REMARK 465 LEU F 182 REMARK 465 ASN F 183 REMARK 465 PRO F 184 REMARK 465 LEU F 185 REMARK 465 PRO F 186 REMARK 465 PRO F 187 REMARK 465 GLU F 188 REMARK 465 ALA F 189 REMARK 465 ALA F 190 REMARK 465 ALA F 191 REMARK 465 LEU F 192 REMARK 465 GLU F 193 REMARK 465 HIS F 194 REMARK 465 HIS F 195 REMARK 465 HIS F 196 REMARK 465 HIS F 197 REMARK 465 HIS F 198 REMARK 465 HIS F 199 REMARK 465 ALA K 1 REMARK 465 HIS K 2 REMARK 465 ASN K 3 REMARK 465 LEU K 182 REMARK 465 ASN K 183 REMARK 465 PRO K 184 REMARK 465 LEU K 185 REMARK 465 PRO K 186 REMARK 465 PRO K 187 REMARK 465 GLU K 188 REMARK 465 ALA K 189 REMARK 465 ALA K 190 REMARK 465 ALA K 191 REMARK 465 LEU K 192 REMARK 465 GLU K 193 REMARK 465 HIS K 194 REMARK 465 HIS K 195 REMARK 465 HIS K 196 REMARK 465 HIS K 197 REMARK 465 HIS K 198 REMARK 465 HIS K 199 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLN A 50 O HOH A 2009 2.12 REMARK 500 NZ LYS F 120 OP3 DC J 16 2.13 REMARK 500 OP3 DG M 15 O HOH K 2002 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG C 15 P DG C 15 OP3 -0.122 REMARK 500 DC E 16 P DC E 16 OP3 -0.130 REMARK 500 DG H 15 P DG H 15 OP3 -0.133 REMARK 500 DG H 21 O3' DG H 21 C3' -0.036 REMARK 500 DG I 4 O3' DG I 4 C3' -0.038 REMARK 500 DC J 16 P DC J 16 OP3 -0.123 REMARK 500 DT L 12 O3' DT L 12 C3' -0.036 REMARK 500 DG M 15 P DG M 15 OP3 -0.130 REMARK 500 DC O 16 P DC O 16 OP3 -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG B 1 O5' - C5' - C4' ANGL. DEV. = -6.1 DEGREES REMARK 500 DG B 1 O4' - C1' - N9 ANGL. DEV. = -4.6 DEGREES REMARK 500 DC B 3 O4' - C1' - N1 ANGL. DEV. = -4.7 DEGREES REMARK 500 DG B 6 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT B 12 C3' - C2' - C1' ANGL. DEV. = -5.8 DEGREES REMARK 500 DT B 12 O4' - C1' - C2' ANGL. DEV. = -5.4 DEGREES REMARK 500 DT B 12 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG C 15 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT C 16 O4' - C1' - N1 ANGL. DEV. = -4.8 DEGREES REMARK 500 DT C 17 C3' - C2' - C1' ANGL. DEV. = -5.0 DEGREES REMARK 500 DT C 17 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG C 21 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC C 24 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DC D 6 O4' - C1' - N1 ANGL. DEV. = -6.4 DEGREES REMARK 500 DG D 8 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT D 13 C3' - C2' - C1' ANGL. DEV. = -5.2 DEGREES REMARK 500 DG E 18 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DA E 21 C3' - C2' - C1' ANGL. DEV. = -5.1 DEGREES REMARK 500 DA E 21 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC G 8 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG G 10 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG G 11 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT H 16 O4' - C1' - N1 ANGL. DEV. = -5.8 DEGREES REMARK 500 DC H 22 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC I 3 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC I 6 C1' - O4' - C4' ANGL. DEV. = -6.1 DEGREES REMARK 500 DC I 6 O4' - C1' - N1 ANGL. DEV. = -5.7 DEGREES REMARK 500 DA I 9 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DA I 14 C3' - C2' - C1' ANGL. DEV. = -8.9 DEGREES REMARK 500 DA I 14 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG J 24 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC L 8 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG M 15 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT M 16 O4' - C1' - N1 ANGL. DEV. = -5.3 DEGREES REMARK 500 DT M 17 C3' - C2' - C1' ANGL. DEV. = -5.8 DEGREES REMARK 500 DG M 20 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC M 24 O4' - C1' - N1 ANGL. DEV. = 6.6 DEGREES REMARK 500 DA N 9 C3' - C2' - C1' ANGL. DEV. = -5.1 DEGREES REMARK 500 DA N 9 O4' - C1' - N9 ANGL. DEV. = 5.5 DEGREES REMARK 500 DT N 13 C3' - C2' - C1' ANGL. DEV. = -7.3 DEGREES REMARK 500 DA N 14 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG O 18 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 47 -62.46 69.15 REMARK 500 SER A 84 115.63 -162.05 REMARK 500 LEU A 122 6.89 55.45 REMARK 500 ASN A 183 84.93 42.37 REMARK 500 ASN F 32 64.46 -119.27 REMARK 500 SER F 84 111.90 -161.49 REMARK 500 ASP F 119 97.75 -68.38 REMARK 500 LEU F 122 -0.04 61.10 REMARK 500 ASN F 129 146.48 -175.87 REMARK 500 GLU K 117 46.19 -144.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1190 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 21 OD2 REMARK 620 2 ASP A 21 OD1 45.7 REMARK 620 3 ALA A 116 O 76.0 98.4 REMARK 620 4 DA B 14 OP1 64.2 86.9 117.3 REMARK 620 5 DC E 16 OP3 110.6 155.6 76.9 74.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F1182 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER F 20 O REMARK 620 2 GLU F 117 OE2 72.5 REMARK 620 3 HOH F2001 O 122.8 133.7 REMARK 620 4 DG H 15 OP2 102.9 123.5 97.1 REMARK 620 5 DG H 15 OP3 76.6 65.4 153.8 59.0 REMARK 620 6 DC I 15 OP1 152.9 80.8 79.6 87.6 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F1181 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 21 OD2 REMARK 620 2 ASP F 21 OD1 48.8 REMARK 620 3 ALA F 116 O 95.1 88.5 REMARK 620 4 HOH F2003 O 73.9 118.6 74.9 REMARK 620 5 DA G 14 OP1 85.6 112.9 150.7 77.3 REMARK 620 6 DC J 16 OP3 166.7 142.6 80.2 92.8 92.5 REMARK 620 7 DC J 16 OP2 136.7 88.4 88.9 147.3 110.5 56.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG K1182 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP K 21 OD1 REMARK 620 2 ASP K 21 OD2 44.2 REMARK 620 3 ALA K 116 O 98.1 73.6 REMARK 620 4 HOH K2003 O 98.2 54.0 58.1 REMARK 620 5 DA L 14 OP1 88.3 67.3 114.8 56.7 REMARK 620 6 DC O 16 OP3 154.6 112.4 79.8 59.1 70.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT F 1180 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F 1181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F 1182 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG K 1182 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5AK9 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS REMARK 900 TARGET DNA IN THE PRESENCE OF 2MM MN REMARK 900 RELATED ID: 5AKF RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS REMARK 900 TARGET DNA NICKED IN THE CODING STRAND A AND IN THE PRESENCE OF 2MM REMARK 900 MN REMARK 900 RELATED ID: 5AKN RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS REMARK 900 TARGET DNA NICKED IN THE NON-CODING STRAND B AND IN THE PRESENCE OF REMARK 900 2MM MN DBREF 5AKM A 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 5AKM B 1 14 PDB 5AKM 5AKM 1 14 DBREF 5AKM C 15 25 PDB 5AKM 5AKM 15 25 DBREF 5AKM D 1 15 PDB 5AKM 5AKM 1 15 DBREF 5AKM E 16 25 PDB 5AKM 5AKM 16 25 DBREF 5AKM F 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 5AKM G 1 14 PDB 5AKM 5AKM 1 14 DBREF 5AKM H 15 25 PDB 5AKM 5AKM 15 25 DBREF 5AKM I 1 15 PDB 5AKM 5AKM 1 15 DBREF 5AKM J 16 25 PDB 5AKM 5AKM 16 25 DBREF 5AKM K 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 5AKM L 1 14 PDB 5AKM 5AKM 1 14 DBREF 5AKM M 15 25 PDB 5AKM 5AKM 15 25 DBREF 5AKM N 1 15 PDB 5AKM 5AKM 1 15 DBREF 5AKM O 16 25 PDB 5AKM 5AKM 16 25 SEQADV 5AKM ALA A 1 UNP P21505 EXPRESSION TAG SEQADV 5AKM SER A 20 UNP P21505 GLY 20 ENGINEERED MUTATION SEQADV 5AKM ALA A 189 UNP P21505 EXPRESSION TAG SEQADV 5AKM ALA A 190 UNP P21505 EXPRESSION TAG SEQADV 5AKM ALA A 191 UNP P21505 EXPRESSION TAG SEQADV 5AKM LEU A 192 UNP P21505 EXPRESSION TAG SEQADV 5AKM GLU A 193 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS A 194 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS A 195 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS A 196 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS A 197 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS A 198 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS A 199 UNP P21505 EXPRESSION TAG SEQADV 5AKM ALA F 1 UNP P21505 EXPRESSION TAG SEQADV 5AKM SER F 20 UNP P21505 GLY 20 ENGINEERED MUTATION SEQADV 5AKM ALA F 189 UNP P21505 EXPRESSION TAG SEQADV 5AKM ALA F 190 UNP P21505 EXPRESSION TAG SEQADV 5AKM ALA F 191 UNP P21505 EXPRESSION TAG SEQADV 5AKM LEU F 192 UNP P21505 EXPRESSION TAG SEQADV 5AKM GLU F 193 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS F 194 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS F 195 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS F 196 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS F 197 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS F 198 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS F 199 UNP P21505 EXPRESSION TAG SEQADV 5AKM ALA K 1 UNP P21505 EXPRESSION TAG SEQADV 5AKM SER K 20 UNP P21505 GLY 20 ENGINEERED MUTATION SEQADV 5AKM ALA K 189 UNP P21505 EXPRESSION TAG SEQADV 5AKM ALA K 190 UNP P21505 EXPRESSION TAG SEQADV 5AKM ALA K 191 UNP P21505 EXPRESSION TAG SEQADV 5AKM LEU K 192 UNP P21505 EXPRESSION TAG SEQADV 5AKM GLU K 193 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS K 194 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS K 195 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS K 196 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS K 197 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS K 198 UNP P21505 EXPRESSION TAG SEQADV 5AKM HIS K 199 UNP P21505 EXPRESSION TAG SEQRES 1 A 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 A 199 LEU LEU GLY LEU ILE ILE SER ASP GLY GLY LEU TYR LYS SEQRES 3 A 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 A 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 A 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 A 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 A 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 A 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 A 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 A 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 A 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 A 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 A 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 A 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 A 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 A 199 HIS HIS HIS HIS SEQRES 1 B 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 B 14 DA SEQRES 1 C 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 D 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 D 15 DA DC SEQRES 1 E 10 DC DC DG DG DC DA DA DG DG DC SEQRES 1 F 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 F 199 LEU LEU GLY LEU ILE ILE SER ASP GLY GLY LEU TYR LYS SEQRES 3 F 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 F 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 F 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 F 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 F 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 F 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 F 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 F 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 F 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 F 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 F 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 F 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 F 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 F 199 HIS HIS HIS HIS SEQRES 1 G 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 G 14 DA SEQRES 1 H 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 I 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 I 15 DA DC SEQRES 1 J 10 DC DC DG DG DC DA DA DG DG DC SEQRES 1 K 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 K 199 LEU LEU GLY LEU ILE ILE SER ASP GLY GLY LEU TYR LYS SEQRES 3 K 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 K 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 K 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 K 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 K 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 K 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 K 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 K 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 K 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 K 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 K 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 K 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 K 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 K 199 HIS HIS HIS HIS SEQRES 1 L 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 L 14 DA SEQRES 1 M 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 N 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 N 15 DA DC SEQRES 1 O 10 DC DC DG DG DC DA DA DG DG DC HET ACT A1188 4 HET ACT A1189 4 HET MG A1190 1 HET ACT F1180 4 HET MG F1181 1 HET MG F1182 1 HET MG K1182 1 HETNAM ACT ACETATE ION HETNAM MG MAGNESIUM ION FORMUL 16 ACT 3(C2 H3 O2 1-) FORMUL 18 MG 4(MG 2+) FORMUL 23 HOH *64(H2 O) HELIX 1 1 VAL A 7 ASP A 21 1 15 HELIX 2 2 SER A 44 LYS A 49 1 6 HELIX 3 3 HIS A 51 LEU A 63 1 13 HELIX 4 4 SER A 84 ARG A 97 1 14 HELIX 5 5 ILE A 98 PHE A 101 5 4 HELIX 6 6 ASN A 102 GLY A 118 1 17 HELIX 7 7 ASN A 131 LEU A 145 1 15 HELIX 8 8 ASP A 169 ILE A 177 1 9 HELIX 9 9 ASN F 6 ASP F 21 1 16 HELIX 10 10 SER F 44 HIS F 51 1 8 HELIX 11 11 HIS F 51 LEU F 63 1 13 HELIX 12 12 SER F 84 ARG F 97 1 14 HELIX 13 13 ILE F 98 PHE F 101 5 4 HELIX 14 14 ASN F 102 GLY F 118 1 17 HELIX 15 15 ASN F 131 LEU F 145 1 15 HELIX 16 16 ASP F 169 ILE F 177 1 9 HELIX 17 17 ASN K 4 ASP K 21 1 18 HELIX 18 18 SER K 44 HIS K 51 1 8 HELIX 19 19 HIS K 51 LEU K 63 1 13 HELIX 20 20 SER K 84 ARG K 97 1 14 HELIX 21 21 ILE K 98 PHE K 101 5 4 HELIX 22 22 ASN K 102 GLY K 118 1 17 HELIX 23 23 ASN K 131 LEU K 145 1 15 HELIX 24 24 ASP K 169 ILE K 177 1 9 SHEET 1 AA 4 GLY A 22 LYS A 28 0 SHEET 2 AA 4 SER A 34 GLN A 42 -1 O GLU A 35 N LEU A 27 SHEET 3 AA 4 TYR A 78 SER A 83 -1 O TYR A 78 N GLN A 42 SHEET 4 AA 4 ILE A 69 LYS A 73 -1 O GLN A 70 N ARG A 81 SHEET 1 AB 3 ARG A 126 ASN A 129 0 SHEET 2 AB 3 VAL A 160 ILE A 165 -1 O TYR A 161 N ASN A 129 SHEET 3 AB 3 ASN A 149 ASP A 155 -1 O THR A 150 N ASN A 164 SHEET 1 FA 4 GLY F 22 LYS F 28 0 SHEET 2 FA 4 SER F 34 GLN F 42 -1 O GLU F 35 N LEU F 27 SHEET 3 FA 4 TYR F 78 SER F 83 -1 O TYR F 78 N GLN F 42 SHEET 4 FA 4 ILE F 69 LYS F 73 -1 O GLN F 70 N ARG F 81 SHEET 1 FB 3 LEU F 125 ASN F 129 0 SHEET 2 FB 3 VAL F 160 ILE F 165 -1 O TYR F 161 N ASN F 129 SHEET 3 FB 3 ASN F 149 ASP F 155 -1 O THR F 150 N ASN F 164 SHEET 1 KA 4 GLY K 22 LYS K 28 0 SHEET 2 KA 4 SER K 34 GLN K 42 -1 O GLU K 35 N LEU K 27 SHEET 3 KA 4 TYR K 78 SER K 83 -1 O TYR K 78 N GLN K 42 SHEET 4 KA 4 ILE K 69 LYS K 73 -1 O GLN K 70 N ARG K 81 SHEET 1 KB 3 LEU K 125 ASN K 129 0 SHEET 2 KB 3 VAL K 160 ILE K 165 -1 O TYR K 161 N ASN K 129 SHEET 3 KB 3 ASN K 149 ASP K 155 -1 O THR K 150 N ASN K 164 LINK OD2 ASP A 21 MG MG A1190 1555 1555 2.95 LINK OD1 ASP A 21 MG MG A1190 1555 1555 2.75 LINK O ALA A 116 MG MG A1190 1555 1555 2.51 LINK MG MG A1190 OP1 DA B 14 1555 1555 2.56 LINK MG MG A1190 OP3 DC E 16 1555 1555 2.13 LINK O SER F 20 MG MG F1182 1555 1555 2.42 LINK OD2 ASP F 21 MG MG F1181 1555 1555 2.24 LINK OD1 ASP F 21 MG MG F1181 1555 1555 2.91 LINK O ALA F 116 MG MG F1181 1555 1555 2.36 LINK OE2 GLU F 117 MG MG F1182 1555 1555 2.29 LINK MG MG F1181 O HOH F2003 1555 1555 2.23 LINK MG MG F1181 OP1 DA G 14 1555 1555 2.19 LINK MG MG F1181 OP3 DC J 16 1555 1555 2.83 LINK MG MG F1181 OP2 DC J 16 1555 1555 2.09 LINK MG MG F1182 O HOH F2001 1555 1555 2.38 LINK MG MG F1182 OP2 DG H 15 1555 1555 2.30 LINK MG MG F1182 OP3 DG H 15 1555 1555 2.58 LINK MG MG F1182 OP1 DC I 15 1555 1555 2.17 LINK OD1 ASP K 21 MG MG K1182 1555 1555 2.85 LINK OD2 ASP K 21 MG MG K1182 1555 1555 2.98 LINK O ALA K 116 MG MG K1182 1555 1555 2.34 LINK MG MG K1182 O HOH K2003 1555 1555 2.55 LINK MG MG K1182 OP1 DA L 14 1555 1555 2.59 LINK MG MG K1182 OP3 DC O 16 1555 1555 2.31 CISPEP 1 GLY A 31 ASN A 32 0 -0.72 CISPEP 2 GLY F 31 ASN F 32 0 -19.34 CISPEP 3 LYS K 30 GLY K 31 0 -4.58 CISPEP 4 GLY K 31 ASN K 32 0 -15.79 SITE 1 AC1 3 LYS A 111 ASN A 183 HOH A2020 SITE 1 AC2 2 ARG A 99 ASN A 131 SITE 1 AC3 2 TYR F 114 LYS F 120 SITE 1 AC4 5 ASP F 21 ALA F 116 HOH F2003 DA G 14 SITE 2 AC4 5 DC J 16 SITE 1 AC5 5 SER F 20 GLU F 117 HOH F2001 DG H 15 SITE 2 AC5 5 DC I 15 SITE 1 AC6 7 ASP A 21 ALA A 116 GLU A 117 HOH A2002 SITE 2 AC6 7 DA B 14 DC D 15 DC E 16 SITE 1 AC7 6 ASP K 21 ALA K 116 HOH K2003 DA L 14 SITE 2 AC7 6 DC N 15 DC O 16 CRYST1 107.390 68.650 107.340 90.00 119.94 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009312 0.000000 0.005363 0.00000 SCALE2 0.000000 0.014567 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010751 0.00000