PDB Short entry for 5CQO HEADER TRANSFERASE 22-JUL-15 5CQO TITLE GTB MUTANT WITH MERCURY - E303D COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTO-BLOOD GROUP ABO SYSTEM TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (UNP RESIDUES 64-354); COMPND 5 SYNONYM: FUCOSYLGLYCOPROTEIN 3-ALPHA-GALACTOSYLTRANSFERASE, COMPND 6 FUCOSYLGLYCOPROTEIN ALPHA-N-ACETYLGALACTOSAMINYLTRANSFERASE, COMPND 7 GLYCOPROTEIN-FUCOSYLGALACTOSIDE ALPHA-N- COMPND 8 ACETYLGALACTOSAMINYLTRANSFERASE,GLYCOPROTEIN-FUCOSYLGALACTOSIDE COMPND 9 ALPHA-GALACTOSYLTRANSFERASE,HISTO-BLOOD GROUP A TRANSFERASE,A COMPND 10 TRANSFERASE,HISTO-BLOOD GROUP B TRANSFERASE,B TRANSFERASE,NAGAT; COMPND 11 EC: 2.4.1.40,2.4.1.37; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABO; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUMAN ABO(H) BLOOD GROUP SYSTEM, GLYCOSYLTRANSFERASE, DOUBLE TURN KEYWDS 2 MOTIF, CATALYTIC DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.M.L.GAGNON,R.J.BLACKLER REVDAT 6 27-SEP-23 5CQO 1 REMARK REVDAT 5 07-MAR-18 5CQO 1 REMARK REVDAT 4 19-APR-17 5CQO 1 JRNL REVDAT 3 11-JAN-17 5CQO 1 JRNL REVDAT 2 07-DEC-16 5CQO 1 JRNL REVDAT 1 26-OCT-16 5CQO 0 JRNL AUTH R.J.BLACKLER,S.M.GAGNON,R.POLAKOWSKI,N.L.ROSE,R.B.ZHENG, JRNL AUTH 2 J.A.LETTS,A.R.JOHAL,B.SCHUMAN,S.N.BORISOVA,M.M.PALCIC, JRNL AUTH 3 S.V.EVANS JRNL TITL GLYCOSYLTRANSFER IN MUTANTS OF PUTATIVE CATALYTIC RESIDUE JRNL TITL 2 GLU303 OF THE HUMAN ABO(H) A AND B BLOOD GROUP JRNL TITL 3 GLYCOSYLTRANSFERASES GTA AND GTB PROCEEDS THROUGH A LABILE JRNL TITL 4 ACTIVE SITE. JRNL REF GLYCOBIOLOGY V. 27 370 2017 JRNL REFN ESSN 1460-2423 JRNL PMID 27979997 JRNL DOI 10.1093/GLYCOB/CWW117 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 32631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1728 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.73 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2278 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 127 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2124 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 185 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.52000 REMARK 3 B22 (A**2) : -0.39000 REMARK 3 B33 (A**2) : 0.91000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.061 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.844 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2186 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2088 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2970 ; 1.674 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4786 ; 0.861 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 258 ; 6.353 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;33.080 ;22.718 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 361 ;14.149 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;21.466 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 327 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2434 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 535 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1041 ; 2.132 ; 2.555 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1040 ; 2.132 ; 2.552 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1296 ; 3.076 ; 3.812 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5CQO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211822. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : D*TREK 9.4SSI REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34359 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 74.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 5.540 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.64 REMARK 200 R MERGE FOR SHELL (I) : 0.23200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1LZ0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 UL DROPS WITH 6-8 MG/ML PROTEIN, 70 REMARK 280 MM N-(2-ACETAMIDO)-2-IMINODIACETIC ACID (ADA) PH 7.5, 50 MM, REMARK 280 SODIUM ACETATE PH 4.6, 40 MM NACL, 5-8 MM MNCL2, 2.5% (V/V) 2- REMARK 280 METHYL-2,4-PENTANEDIOL (MPD), 5%(V/V) GLYCEROL, 2%(W/V) PEG 4000, REMARK 280 AND 0.3-0.5 MM 3-CHLOROMERCURI-2-METHOXYPROPYLUREA SUSPENDED REMARK 280 OVER 1 ML OF A RESEVOIR SOLUTION: 50 MM ADA PH 7.5, 10 MM MNCL2, REMARK 280 100 MM AMMONIUM SULFATE, 5%(V/V) MPD, 10%(V/V) GLYCEROL, AND 8- REMARK 280 10%(W/V) PEG 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.69500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.69500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.43500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.77500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.43500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.77500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.69500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.43500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.77500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.69500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.43500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.77500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 177 REMARK 465 TYR A 178 REMARK 465 LYS A 179 REMARK 465 ARG A 180 REMARK 465 TRP A 181 REMARK 465 GLN A 182 REMARK 465 ASP A 183 REMARK 465 VAL A 184 REMARK 465 SER A 185 REMARK 465 MET A 186 REMARK 465 ARG A 187 REMARK 465 ARG A 188 REMARK 465 MET A 189 REMARK 465 GLU A 190 REMARK 465 MET A 191 REMARK 465 ILE A 192 REMARK 465 SER A 193 REMARK 465 ASP A 194 REMARK 465 GLU A 297 REMARK 465 ALA A 298 REMARK 465 VAL A 299 REMARK 465 TRP A 300 REMARK 465 HIS A 301 REMARK 465 ASP A 302 REMARK 465 LYS A 346 REMARK 465 ASN A 347 REMARK 465 HIS A 348 REMARK 465 GLN A 349 REMARK 465 ALA A 350 REMARK 465 VAL A 351 REMARK 465 ARG A 352 REMARK 465 ASN A 353 REMARK 465 PRO A 354 REMARK 465 GLU A 355 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 195 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 110 NE - CZ - NH2 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 241 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 124 -125.42 46.45 REMARK 500 THR A 245 50.36 -90.48 REMARK 500 LEU A 324 94.59 -160.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 403 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 80 SG REMARK 620 2 GLY A 98 O 82.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 402 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 119 OG1 REMARK 620 2 HOH A 683 O 108.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 401 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 284 SG REMARK 620 2 CYS A 284 SG 58.1 REMARK 620 3 HOH A 685 O 117.9 169.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 404 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 284 SG REMARK 620 2 HIS A 305 O 78.8 REMARK 620 3 HOH A 682 O 154.4 113.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CMF RELATED DB: PDB REMARK 900 RELATED ID: 5CMG RELATED DB: PDB REMARK 900 RELATED ID: 5CMH RELATED DB: PDB REMARK 900 RELATED ID: 5CMI RELATED DB: PDB REMARK 900 RELATED ID: 5CMJ RELATED DB: PDB REMARK 900 RELATED ID: 5CQL RELATED DB: PDB REMARK 900 RELATED ID: 5CQM RELATED DB: PDB REMARK 900 RELATED ID: 5CQN RELATED DB: PDB REMARK 900 RELATED ID: 5CQP RELATED DB: PDB DBREF 5CQO A 64 354 UNP P16442 BGAT_HUMAN 64 354 SEQADV 5CQO GLU A 61 UNP P16442 EXPRESSION TAG SEQADV 5CQO PHE A 62 UNP P16442 EXPRESSION TAG SEQADV 5CQO MET A 63 UNP P16442 EXPRESSION TAG SEQADV 5CQO GLY A 176 UNP P16442 ARG 176 VARIANT SEQADV 5CQO SER A 235 UNP P16442 GLY 235 VARIANT SEQADV 5CQO MET A 266 UNP P16442 LEU 266 VARIANT SEQADV 5CQO ALA A 268 UNP P16442 GLY 268 VARIANT SEQADV 5CQO ASP A 303 UNP P16442 GLU 303 ENGINEERED MUTATION SEQADV 5CQO GLU A 355 UNP P16442 EXPRESSION TAG SEQRES 1 A 295 GLU PHE MET VAL SER LEU PRO ARG MET VAL TYR PRO GLN SEQRES 2 A 295 PRO LYS VAL LEU THR PRO CYS ARG LYS ASP VAL LEU VAL SEQRES 3 A 295 VAL THR PRO TRP LEU ALA PRO ILE VAL TRP GLU GLY THR SEQRES 4 A 295 PHE ASN ILE ASP ILE LEU ASN GLU GLN PHE ARG LEU GLN SEQRES 5 A 295 ASN THR THR ILE GLY LEU THR VAL PHE ALA ILE LYS LYS SEQRES 6 A 295 TYR VAL ALA PHE LEU LYS LEU PHE LEU GLU THR ALA GLU SEQRES 7 A 295 LYS HIS PHE MET VAL GLY HIS ARG VAL HIS TYR TYR VAL SEQRES 8 A 295 PHE THR ASP GLN PRO ALA ALA VAL PRO ARG VAL THR LEU SEQRES 9 A 295 GLY THR GLY ARG GLN LEU SER VAL LEU GLU VAL GLY ALA SEQRES 10 A 295 TYR LYS ARG TRP GLN ASP VAL SER MET ARG ARG MET GLU SEQRES 11 A 295 MET ILE SER ASP PHE CYS GLU ARG ARG PHE LEU SER GLU SEQRES 12 A 295 VAL ASP TYR LEU VAL CYS VAL ASP VAL ASP MET GLU PHE SEQRES 13 A 295 ARG ASP HIS VAL GLY VAL GLU ILE LEU THR PRO LEU PHE SEQRES 14 A 295 GLY THR LEU HIS PRO SER PHE TYR GLY SER SER ARG GLU SEQRES 15 A 295 ALA PHE THR TYR GLU ARG ARG PRO GLN SER GLN ALA TYR SEQRES 16 A 295 ILE PRO LYS ASP GLU GLY ASP PHE TYR TYR MET GLY ALA SEQRES 17 A 295 PHE PHE GLY GLY SER VAL GLN GLU VAL GLN ARG LEU THR SEQRES 18 A 295 ARG ALA CYS HIS GLN ALA MET MET VAL ASP GLN ALA ASN SEQRES 19 A 295 GLY ILE GLU ALA VAL TRP HIS ASP ASP SER HIS LEU ASN SEQRES 20 A 295 LYS TYR LEU LEU ARG HIS LYS PRO THR LYS VAL LEU SER SEQRES 21 A 295 PRO GLU TYR LEU TRP ASP GLN GLN LEU LEU GLY TRP PRO SEQRES 22 A 295 ALA VAL LEU ARG LYS LEU ARG PHE THR ALA VAL PRO LYS SEQRES 23 A 295 ASN HIS GLN ALA VAL ARG ASN PRO GLU HET HG A 401 1 HET HG A 402 1 HET HG A 403 1 HET HG A 404 1 HETNAM HG MERCURY (II) ION FORMUL 2 HG 4(HG 2+) FORMUL 6 HOH *185(H2 O) HELIX 1 AA1 ASN A 101 GLN A 112 1 12 HELIX 2 AA2 ILE A 123 ALA A 128 5 6 HELIX 3 AA3 PHE A 129 PHE A 141 1 13 HELIX 4 AA4 GLN A 155 VAL A 159 5 5 HELIX 5 AA5 CYS A 196 VAL A 204 1 9 HELIX 6 AA6 GLY A 221 LEU A 225 5 5 HELIX 7 AA7 SER A 240 PHE A 244 5 5 HELIX 8 AA8 VAL A 274 ASN A 294 1 21 HELIX 9 AA9 SER A 304 HIS A 313 1 10 HELIX 10 AB1 PRO A 321 LEU A 324 5 4 HELIX 11 AB2 ASP A 326 GLY A 331 1 6 SHEET 1 AA1 8 ILE A 94 VAL A 95 0 SHEET 2 AA1 8 LYS A 317 LEU A 319 1 O VAL A 318 N VAL A 95 SHEET 3 AA1 8 LEU A 228 THR A 231 1 N GLY A 230 O LEU A 319 SHEET 4 AA1 8 PHE A 269 SER A 273 -1 O GLY A 271 N PHE A 229 SHEET 5 AA1 8 TYR A 206 VAL A 210 -1 N CYS A 209 O PHE A 270 SHEET 6 AA1 8 THR A 115 ALA A 122 1 N GLY A 117 O TYR A 206 SHEET 7 AA1 8 ARG A 146 THR A 153 1 O PHE A 152 N ALA A 122 SHEET 8 AA1 8 ARG A 168 GLU A 174 1 O GLN A 169 N TYR A 149 SHEET 1 AA2 2 MET A 214 PHE A 216 0 SHEET 2 AA2 2 PHE A 341 ALA A 343 -1 O THR A 342 N GLU A 215 LINK SG CYS A 80 HG HG A 403 1555 1555 2.33 LINK O GLY A 98 HG HG A 403 1555 1555 2.72 LINK OG1 THR A 119 HG HG A 402 1555 1555 2.98 LINK SG ACYS A 284 HG HG A 401 1555 1555 3.02 LINK SG BCYS A 284 HG HG A 401 1555 1555 2.38 LINK SG BCYS A 284 HG HG A 404 1555 1555 2.92 LINK O HIS A 305 HG HG A 404 1555 1555 3.03 LINK HG HG A 401 O HOH A 685 1555 1555 2.67 LINK HG HG A 402 O HOH A 683 1555 1555 2.43 LINK HG HG A 404 O HOH A 682 1555 1555 2.79 SITE 1 AC1 3 LEU A 280 CYS A 284 HOH A 685 SITE 1 AC2 3 THR A 119 CYS A 209 HOH A 683 SITE 1 AC3 2 CYS A 80 GLY A 98 SITE 1 AC4 3 CYS A 284 HIS A 305 HOH A 682 CRYST1 52.870 149.550 79.390 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018914 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006687 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012596 0.00000