PDB Short entry for 5DWJ HEADER TRANSCRIPTION 22-SEP-15 5DWJ TITLE CRYSTAL STRUCTURE OF THE ER-ALPHA LIGAND-BINDING DOMAIN IN COMPLEX TITLE 2 WITH A RESORCINYL 4-FLUORO-SUBSTITUTED DIARYL-IMINE ANALOG 4-[(E)- TITLE 3 [(4-FLUOROPHENYL)IMINO](4-HYDROXYPHENYL)METHYL]BENZENE-1,3-DIOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND-BINDING DOMAIN; COMPND 5 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 6 GROUP A MEMBER 1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 11 CHAIN: C, D; COMPND 12 FRAGMENT: NUCLEAR RECEPTOR-INTERACTING PEPTIDE; COMPND 13 SYNONYM: NCOA-2,CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 75,BHLHE75, COMPND 14 TRANSCRIPTIONAL INTERMEDIARY FACTOR 2,HTIF2; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, LIGAND BINDING, PROTEIN- KEYWDS 2 LIGAND COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.C.NWACHUKWU,N.J.WRIGHT,S.SRINIVASAN,Y.ZHENG,S.WANG,J.MIN,C.DONG, AUTHOR 2 Z.LIAO,V.CAVETT,J.NOWAK,R.HOUTMAN,K.E.CARLSON,J.S.JOSAN,O.ELEMENTO, AUTHOR 3 J.A.KATZENELLENBOGEN,H.B.ZHOU,K.W.NETTLES REVDAT 2 27-SEP-23 5DWJ 1 REMARK REVDAT 1 04-MAY-16 5DWJ 0 JRNL AUTH J.C.NWACHUKWU,S.SRINIVASAN,Y.ZHENG,S.WANG,J.MIN,C.DONG, JRNL AUTH 2 Z.LIAO,J.NOWAK,N.J.WRIGHT,R.HOUTMAN,K.E.CARLSON,J.S.JOSAN, JRNL AUTH 3 O.ELEMENTO,J.A.KATZENELLENBOGEN,H.B.ZHOU,K.W.NETTLES JRNL TITL PREDICTIVE FEATURES OF LIGAND-SPECIFIC SIGNALING THROUGH THE JRNL TITL 2 ESTROGEN RECEPTOR. JRNL REF MOL.SYST.BIOL. V. 12 864 2016 JRNL REFN ESSN 1744-4292 JRNL PMID 27107013 JRNL DOI 10.15252/MSB.20156701 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.3 REMARK 3 NUMBER OF REFLECTIONS : 29137 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.8846 - 4.6998 0.96 2344 152 0.1777 0.2062 REMARK 3 2 4.6998 - 3.7321 0.99 2362 155 0.1598 0.1937 REMARK 3 3 3.7321 - 3.2608 0.99 2352 153 0.1890 0.2224 REMARK 3 4 3.2608 - 2.9629 0.97 2333 148 0.2199 0.2576 REMARK 3 5 2.9629 - 2.7506 0.96 2262 156 0.2226 0.2262 REMARK 3 6 2.7506 - 2.5885 0.95 2244 158 0.2247 0.2505 REMARK 3 7 2.5885 - 2.4589 0.93 2223 144 0.2256 0.2459 REMARK 3 8 2.4589 - 2.3519 0.88 2082 137 0.2322 0.2710 REMARK 3 9 2.3519 - 2.2614 0.84 2017 120 0.2516 0.3191 REMARK 3 10 2.2614 - 2.1834 0.85 2016 140 0.2713 0.2962 REMARK 3 11 2.1834 - 2.1151 0.70 1652 100 0.2990 0.3199 REMARK 3 12 2.1151 - 2.0547 0.73 1737 111 0.3061 0.3543 REMARK 3 13 2.0547 - 2.0006 0.72 1729 110 0.3347 0.3229 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3838 REMARK 3 ANGLE : 0.572 5197 REMARK 3 CHIRALITY : 0.020 619 REMARK 3 PLANARITY : 0.002 644 REMARK 3 DIHEDRAL : 12.268 1379 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 305 THROUGH 411 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3852 -19.6081 1.0981 REMARK 3 T TENSOR REMARK 3 T11: 0.3418 T22: 0.2867 REMARK 3 T33: 0.2172 T12: -0.0481 REMARK 3 T13: 0.0309 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 4.6732 L22: 2.4544 REMARK 3 L33: 5.9343 L12: 0.0580 REMARK 3 L13: -1.5932 L23: -1.2979 REMARK 3 S TENSOR REMARK 3 S11: 0.0410 S12: -0.3022 S13: 0.0452 REMARK 3 S21: 0.2857 S22: -0.0779 S23: 0.1562 REMARK 3 S31: 0.1934 S32: -0.0409 S33: 0.0590 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 412 THROUGH 472 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1736 -25.0716 -6.4823 REMARK 3 T TENSOR REMARK 3 T11: 0.4307 T22: 0.2802 REMARK 3 T33: 0.2040 T12: -0.0221 REMARK 3 T13: 0.0848 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 5.1843 L22: 6.2058 REMARK 3 L33: 5.4576 L12: 0.5395 REMARK 3 L13: -1.3098 L23: 0.2305 REMARK 3 S TENSOR REMARK 3 S11: -0.1811 S12: 0.1007 S13: -0.3801 REMARK 3 S21: -0.0659 S22: -0.1017 S23: 0.0606 REMARK 3 S31: 0.9481 S32: 0.0856 S33: 0.1871 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 473 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2538 -18.2105 -8.3277 REMARK 3 T TENSOR REMARK 3 T11: 0.4043 T22: 0.2471 REMARK 3 T33: 0.1563 T12: -0.0184 REMARK 3 T13: 0.0153 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 7.8287 L22: 2.6858 REMARK 3 L33: 5.6367 L12: 0.3895 REMARK 3 L13: -0.2288 L23: -0.4099 REMARK 3 S TENSOR REMARK 3 S11: 0.0814 S12: -0.0900 S13: -0.0729 REMARK 3 S21: -0.0093 S22: -0.1058 S23: 0.0402 REMARK 3 S31: 0.1855 S32: -0.0138 S33: 0.0373 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 305 THROUGH 371 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0535 -22.4238 -34.8031 REMARK 3 T TENSOR REMARK 3 T11: 0.3355 T22: 0.3035 REMARK 3 T33: 0.2980 T12: 0.0098 REMARK 3 T13: 0.0859 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 4.0610 L22: 4.1680 REMARK 3 L33: 7.2085 L12: 1.6200 REMARK 3 L13: -1.8104 L23: 0.1666 REMARK 3 S TENSOR REMARK 3 S11: -0.3448 S12: 0.4427 S13: -0.3145 REMARK 3 S21: -0.1003 S22: 0.2098 S23: -0.1809 REMARK 3 S31: 0.5805 S32: 0.3090 S33: 0.1629 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 372 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5582 -14.4207 -29.4950 REMARK 3 T TENSOR REMARK 3 T11: 0.2951 T22: 0.3486 REMARK 3 T33: 0.2384 T12: 0.0335 REMARK 3 T13: -0.0081 T23: 0.0400 REMARK 3 L TENSOR REMARK 3 L11: 3.6752 L22: 4.9752 REMARK 3 L33: 8.2051 L12: 0.3113 REMARK 3 L13: -2.8507 L23: -0.3125 REMARK 3 S TENSOR REMARK 3 S11: 0.0444 S12: 0.4910 S13: 0.2881 REMARK 3 S21: 0.1136 S22: 0.1026 S23: 0.3759 REMARK 3 S31: -0.4124 S32: -0.8292 S33: -0.1883 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 438 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8647 -19.7347 -19.2383 REMARK 3 T TENSOR REMARK 3 T11: 0.2769 T22: 0.6058 REMARK 3 T33: 0.3276 T12: 0.0805 REMARK 3 T13: 0.0305 T23: 0.0558 REMARK 3 L TENSOR REMARK 3 L11: 4.5072 L22: 4.2204 REMARK 3 L33: 8.2841 L12: 1.4732 REMARK 3 L13: 0.2613 L23: 1.2154 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: -0.3466 S13: -0.1577 REMARK 3 S21: 0.3536 S22: -0.1290 S23: -0.3254 REMARK 3 S31: 0.4724 S32: 1.4535 S33: 0.0808 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 497 THROUGH 549 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9468 -21.3461 -24.1405 REMARK 3 T TENSOR REMARK 3 T11: 0.4029 T22: 0.3388 REMARK 3 T33: 0.3139 T12: -0.0090 REMARK 3 T13: 0.0715 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 4.9601 L22: 3.9271 REMARK 3 L33: 8.3758 L12: 1.2727 REMARK 3 L13: -0.1207 L23: 0.7402 REMARK 3 S TENSOR REMARK 3 S11: -0.1543 S12: 0.2895 S13: -0.2709 REMARK 3 S21: -0.2670 S22: -0.0268 S23: 0.3739 REMARK 3 S31: 0.4085 S32: -0.9892 S33: 0.0844 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 687 THROUGH 696 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.2493 -6.5968 -1.8682 REMARK 3 T TENSOR REMARK 3 T11: 0.6416 T22: 0.7741 REMARK 3 T33: 0.8326 T12: 0.1145 REMARK 3 T13: 0.1574 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.0694 L22: 0.1113 REMARK 3 L33: 0.0096 L12: -0.0474 REMARK 3 L13: -0.0150 L23: 0.0542 REMARK 3 S TENSOR REMARK 3 S11: 0.6668 S12: 0.2466 S13: 0.8419 REMARK 3 S21: -0.0830 S22: -1.0617 S23: 0.6936 REMARK 3 S31: -1.0186 S32: -1.1812 S33: -0.0003 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 688 THROUGH 696 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1522 -38.1806 -35.6407 REMARK 3 T TENSOR REMARK 3 T11: 1.3196 T22: 0.5490 REMARK 3 T33: 0.6518 T12: -0.0290 REMARK 3 T13: 0.1621 T23: -0.0630 REMARK 3 L TENSOR REMARK 3 L11: 0.0510 L22: 0.0666 REMARK 3 L33: 0.0589 L12: -0.0294 REMARK 3 L13: 0.0521 L23: 0.0312 REMARK 3 S TENSOR REMARK 3 S11: -0.1194 S12: 0.6139 S13: -1.3872 REMARK 3 S21: 0.0250 S22: 0.0007 S23: -0.2598 REMARK 3 S31: 0.3354 S32: 0.5328 S33: -0.0004 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DWJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213934. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : CHANNEL-CUT SI(111) CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32176 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.92400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2QA8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 0.05M MGCL2, 0.067M REMARK 280 NACL, 0.1M TRIS, PH 8.3, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.11450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 ASN A 304 REMARK 465 THR A 334 REMARK 465 ARG A 335 REMARK 465 PRO A 336 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 THR A 465 REMARK 465 LEU A 466 REMARK 465 LYS A 467 REMARK 465 SER A 468 REMARK 465 LEU A 469 REMARK 465 GLU A 470 REMARK 465 GLU A 471 REMARK 465 LEU A 549 REMARK 465 HIS A 550 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 ILE B 298 REMARK 465 LYS B 299 REMARK 465 ARG B 300 REMARK 465 SER B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 PHE B 337 REMARK 465 GLY B 415 REMARK 465 LYS B 416 REMARK 465 CYS B 417 REMARK 465 VAL B 418 REMARK 465 GLU B 419 REMARK 465 GLY B 420 REMARK 465 PHE B 461 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 SER B 464 REMARK 465 THR B 465 REMARK 465 LEU B 466 REMARK 465 LYS B 467 REMARK 465 SER B 468 REMARK 465 LEU B 469 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 465 LYS C 686 REMARK 465 SER C 697 REMARK 465 SER C 698 REMARK 465 SER C 699 REMARK 465 LYS D 686 REMARK 465 HIS D 687 REMARK 465 SER D 697 REMARK 465 SER D 698 REMARK 465 SER D 699 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 306 CG CD1 CD2 REMARK 470 GLU A 339 CG CD OE1 OE2 REMARK 470 GLN A 414 CG CD OE1 NE2 REMARK 470 GLU A 423 CG CD OE1 OE2 REMARK 470 ARG A 436 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 472 CG CD CE NZ REMARK 470 LYS A 481 CG CD CE NZ REMARK 470 LYS A 529 CG CD CE NZ REMARK 470 LYS A 531 CG CD CE NZ REMARK 470 VAL A 533 CG1 CG2 REMARK 470 ARG A 548 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 335 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 339 CG CD OE1 OE2 REMARK 470 LEU B 372 CG CD1 CD2 REMARK 470 HIS B 373 CG ND1 CD2 CE1 NE2 REMARK 470 ASN B 413 CG OD1 ND2 REMARK 470 GLN B 414 CG CD OE1 NE2 REMARK 470 GLU B 423 CG CD OE1 OE2 REMARK 470 GLU B 470 CG CD OE1 OE2 REMARK 470 GLU B 471 CG CD OE1 OE2 REMARK 470 LYS B 472 CG CD CE NZ REMARK 470 ARG B 477 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 481 CG CD CE NZ REMARK 470 LYS B 531 CG CD CE NZ REMARK 470 ASN B 532 CG OD1 ND2 REMARK 470 VAL B 533 CG1 CG2 REMARK 470 ARG B 548 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 549 CG CD1 CD2 REMARK 470 LYS D 688 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 483 O HOH B 1001 1.99 REMARK 500 O HOH B 1063 O HOH B 1065 2.05 REMARK 500 O GLU B 470 O HOH B 1002 2.05 REMARK 500 O HOH B 1068 O HOH B 1070 2.10 REMARK 500 N ARG A 412 O HOH A 1001 2.12 REMARK 500 O PRO A 333 O HOH A 1002 2.17 REMARK 500 O HOH B 1042 O HOH B 1058 2.17 REMARK 500 O VAL B 446 O HOH B 1003 2.17 REMARK 500 O HOH B 1064 O HOH B 1067 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1062 O HOH B 1068 2555 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 332 105.73 -172.25 REMARK 500 VAL A 533 -77.18 -36.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5J2 A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5J2 B 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DVV RELATED DB: PDB REMARK 900 5DVV CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT TRIARYL- REMARK 900 SUBSTITUTED IMINE ANALOG DBREF 5DWJ A 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 5DWJ B 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 5DWJ C 686 699 UNP Q15596 NCOA2_HUMAN 686 699 DBREF 5DWJ D 686 699 UNP Q15596 NCOA2_HUMAN 686 699 SEQADV 5DWJ SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 5DWJ SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQRES 1 A 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 A 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 A 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 A 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 A 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 A 257 ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP GLN SEQRES 7 A 257 VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU MET SEQRES 8 A 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 A 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 A 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 A 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 A 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 A 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 A 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 A 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 A 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 A 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 A 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 A 257 ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET LEU SEQRES 20 A 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 B 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 B 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 B 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 B 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 B 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 B 257 ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP GLN SEQRES 7 B 257 VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU MET SEQRES 8 B 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 B 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 B 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 B 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 B 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 B 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 B 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 B 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 B 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 B 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 B 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 B 257 ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET LEU SEQRES 20 B 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 C 14 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 2 C 14 SER SEQRES 1 D 14 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 2 D 14 SER HET 5J2 A 901 24 HET 5J2 B 900 24 HETNAM 5J2 4-[(E)-[(4-FLUOROPHENYL)IMINO](4-HYDROXYPHENYL) HETNAM 2 5J2 METHYL]BENZENE-1,3-DIOL FORMUL 5 5J2 2(C19 H14 F N O3) FORMUL 7 HOH *133(H2 O) HELIX 1 AA1 SER A 305 LEU A 310 5 6 HELIX 2 AA2 THR A 311 GLU A 323 1 13 HELIX 3 AA3 SER A 338 LYS A 362 1 25 HELIX 4 AA4 THR A 371 ARG A 394 1 24 HELIX 5 AA5 ASP A 411 LYS A 416 1 6 HELIX 6 AA6 GLY A 420 MET A 438 1 19 HELIX 7 AA7 GLN A 441 SER A 456 1 16 HELIX 8 AA8 GLY A 457 PHE A 461 5 5 HELIX 9 AA9 ASP A 473 ALA A 493 1 21 HELIX 10 AB1 THR A 496 ASN A 532 1 37 HELIX 11 AB2 SER A 537 ALA A 546 1 10 HELIX 12 AB3 LEU B 306 LEU B 310 5 5 HELIX 13 AB4 THR B 311 ALA B 322 1 12 HELIX 14 AB5 GLU B 339 LYS B 362 1 24 HELIX 15 AB6 GLY B 366 LEU B 370 5 5 HELIX 16 AB7 THR B 371 SER B 395 1 25 HELIX 17 AB8 VAL B 422 ASN B 439 1 18 HELIX 18 AB9 GLN B 441 SER B 456 1 16 HELIX 19 AC1 GLU B 471 ALA B 493 1 23 HELIX 20 AC2 THR B 496 ASN B 532 1 37 HELIX 21 AC3 SER B 537 ALA B 546 1 10 HELIX 22 AC4 LYS C 688 ASP C 696 1 9 HELIX 23 AC5 ILE D 689 ASP D 696 1 8 SHEET 1 AA1 2 LEU A 402 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 LEU A 410 -1 O LEU A 410 N LEU A 402 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 SITE 1 AC1 15 MET A 343 LEU A 346 THR A 347 ALA A 350 SITE 2 AC1 15 GLU A 353 LEU A 387 MET A 388 LEU A 391 SITE 3 AC1 15 ARG A 394 MET A 421 ILE A 424 HIS A 524 SITE 4 AC1 15 LEU A 525 LEU A 540 HOH A1011 SITE 1 AC2 13 MET B 343 LEU B 346 THR B 347 ALA B 350 SITE 2 AC2 13 GLU B 353 LEU B 387 MET B 388 ARG B 394 SITE 3 AC2 13 MET B 421 ILE B 424 HIS B 524 LEU B 525 SITE 4 AC2 13 HOH B1029 CRYST1 54.996 82.229 58.420 90.00 110.37 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018183 0.000000 0.006751 0.00000 SCALE2 0.000000 0.012161 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018259 0.00000