PDB Short entry for 5EKE HEADER TRANSFERASE 03-NOV-15 5EKE TITLE STRUCTURE OF THE POLYISOPRENYL-PHOSPHATE GLYCOSYLTRANSFERASE GTRB TITLE 2 (F215A MUTANT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED GLYCOSYLTRANSFERASE SLL0501; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 2.4.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA); SOURCE 3 ORGANISM_TAXID: 1111708; SOURCE 4 STRAIN: PCC 6803 / KAZUSA; SOURCE 5 GENE: SLL0501; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSYLTRANSFERASE, MEMBRANE PROTEIN, ENZYME, BACTOPRENOL, KEYWDS 2 STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK CONSORTIUM ON MEMBRANE KEYWDS 3 PROTEIN STRUCTURE, NYCOMPS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.ARDICCIONI,O.B.CLARKE,D.TOMASEK,S.BANERJEE,K.R.RAJASHANKAR,Q.LIU, AUTHOR 2 L.SHAPIRO,F.MANCIA,NEW YORK CONSORTIUM ON MEMBRANE PROTEIN STRUCTURE AUTHOR 3 (NYCOMPS) REVDAT 5 06-MAR-24 5EKE 1 LINK REVDAT 4 25-DEC-19 5EKE 1 REMARK REVDAT 3 13-SEP-17 5EKE 1 REMARK REVDAT 2 03-FEB-16 5EKE 1 JRNL REVDAT 1 06-JAN-16 5EKE 0 JRNL AUTH C.ARDICCIONI,O.B.CLARKE,D.TOMASEK,H.A.ISSA,D.C.VON ALPEN, JRNL AUTH 2 H.L.POND,S.BANERJEE,K.R.RAJASHANKAR,Q.LIU,Z.GUAN,C.LI, JRNL AUTH 3 B.KLOSS,R.BRUNI,E.KLOPPMANN,B.ROST,M.C.MANZINI,L.SHAPIRO, JRNL AUTH 4 F.MANCIA JRNL TITL STRUCTURE OF THE POLYISOPRENYL-PHOSPHATE GLYCOSYLTRANSFERASE JRNL TITL 2 GTRB AND INSIGHTS INTO THE MECHANISM OF CATALYSIS. JRNL REF NAT COMMUN V. 7 10175 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 26729507 JRNL DOI 10.1038/NCOMMS10175 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2165 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 42993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 2058 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.3864 - 7.3795 0.98 2760 162 0.2289 0.2247 REMARK 3 2 7.3795 - 5.8668 0.99 2736 160 0.2572 0.3337 REMARK 3 3 5.8668 - 5.1279 0.99 2743 133 0.2440 0.2810 REMARK 3 4 5.1279 - 4.6603 0.99 2746 140 0.2202 0.2461 REMARK 3 5 4.6603 - 4.3270 0.98 2728 123 0.2049 0.2250 REMARK 3 6 4.3270 - 4.0723 0.97 2675 142 0.2284 0.2556 REMARK 3 7 4.0723 - 3.8686 0.97 2682 130 0.2541 0.2803 REMARK 3 8 3.8686 - 3.7004 0.99 2764 139 0.2562 0.3131 REMARK 3 9 3.7004 - 3.5581 0.99 2710 137 0.2854 0.3145 REMARK 3 10 3.5581 - 3.4355 0.99 2757 135 0.3101 0.3589 REMARK 3 11 3.4355 - 3.3281 1.00 2756 125 0.3044 0.3208 REMARK 3 12 3.3281 - 3.2331 1.00 2727 154 0.3282 0.4402 REMARK 3 13 3.2331 - 3.1480 1.00 2760 130 0.3226 0.3455 REMARK 3 14 3.1480 - 3.0713 1.00 2734 142 0.3389 0.3658 REMARK 3 15 3.0713 - 3.0015 0.95 2657 106 0.4106 0.4312 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 112.6 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 9455 REMARK 3 ANGLE : 0.531 12888 REMARK 3 CHIRALITY : 0.042 1513 REMARK 3 PLANARITY : 0.005 1606 REMARK 3 DIHEDRAL : 13.592 5531 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -54.5789 24.8206 15.7268 REMARK 3 T TENSOR REMARK 3 T11: 0.7656 T22: 0.7578 REMARK 3 T33: 0.7800 T12: 0.0582 REMARK 3 T13: -0.0011 T23: -0.0603 REMARK 3 L TENSOR REMARK 3 L11: 1.2862 L22: 0.9858 REMARK 3 L33: 1.6337 L12: 0.1147 REMARK 3 L13: 0.3379 L23: -0.1859 REMARK 3 S TENSOR REMARK 3 S11: -0.2028 S12: -0.1239 S13: 0.1775 REMARK 3 S21: 0.2223 S22: 0.0910 S23: -0.2994 REMARK 3 S31: -0.0437 S32: 0.4468 S33: 0.0846 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EKE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215062. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.14 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43376 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 34.384 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 1.26300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 600 NL PROTEIN + 300 NL OF RESERVOIR REMARK 280 COMPOSED AS FOLLOWS: CONTAINING 16-18% PEG600 (V/V), 0.12 M TRIS/ REMARK 280 HCL, PH 9.0, 0.1 M NACL AND 1 MM TCEP) UNDER 1 UL OF SILICONE REMARK 280 OIL, IN 96-WELL AXYGEN SITTING-DROP PLATES. CRYSTALS TYPICALLY REMARK 280 APPEARED AFTER 1-2 DAYS AND GREW TO A FINAL SIZE OF REMARK 280 APPROXIMATELY 150 UM IN EACH DIMENSION, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 77.06750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 71.12150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 77.06750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 71.12150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -185.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 GLY A -13 REMARK 465 VAL A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 GLY A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 GLU A 128 REMARK 465 THR A 129 REMARK 465 TRP A 130 REMARK 465 VAL A 131 REMARK 465 LYS A 132 REMARK 465 GLN A 133 REMARK 465 PHE A 134 REMARK 465 THR A 135 REMARK 465 ALA A 136 REMARK 465 LYS A 137 REMARK 465 MET A 138 REMARK 465 PHE A 139 REMARK 465 TYR A 140 REMARK 465 LYS A 141 REMARK 465 VAL A 142 REMARK 465 ILE A 143 REMARK 465 GLY A 144 REMARK 465 ARG A 145 REMARK 465 GLU A 198 REMARK 465 PRO A 199 REMARK 465 ARG A 200 REMARK 465 PHE A 201 REMARK 465 GLN A 202 REMARK 465 GLY A 203 REMARK 465 GLN A 204 REMARK 465 THR A 205 REMARK 465 LYS A 206 REMARK 465 TRP A 207 REMARK 465 VAL A 258 REMARK 465 LEU A 314 REMARK 465 GLU A 315 REMARK 465 LYS A 316 REMARK 465 LEU A 317 REMARK 465 ASN A 318 REMARK 465 MET B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 SER B -15 REMARK 465 SER B -14 REMARK 465 GLY B -13 REMARK 465 VAL B -12 REMARK 465 ASP B -11 REMARK 465 LEU B -10 REMARK 465 GLY B -9 REMARK 465 THR B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 ARG B 125 REMARK 465 GLN B 126 REMARK 465 GLY B 127 REMARK 465 GLU B 128 REMARK 465 THR B 129 REMARK 465 TRP B 130 REMARK 465 VAL B 131 REMARK 465 LYS B 132 REMARK 465 GLU B 198 REMARK 465 PRO B 199 REMARK 465 ARG B 200 REMARK 465 PHE B 201 REMARK 465 GLN B 202 REMARK 465 GLY B 203 REMARK 465 GLN B 204 REMARK 465 LYS B 252 REMARK 465 THR B 253 REMARK 465 ILE B 254 REMARK 465 THR B 255 REMARK 465 LEU B 256 REMARK 465 GLY B 257 REMARK 465 LEU B 317 REMARK 465 ASN B 318 REMARK 465 MET C -23 REMARK 465 HIS C -22 REMARK 465 HIS C -21 REMARK 465 HIS C -20 REMARK 465 HIS C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 SER C -16 REMARK 465 SER C -15 REMARK 465 GLY C -14 REMARK 465 VAL C -13 REMARK 465 ASP C -12 REMARK 465 LEU C -11 REMARK 465 GLY C -10 REMARK 465 THR C -9 REMARK 465 GLU C -8 REMARK 465 ASN C -7 REMARK 465 LEU C -6 REMARK 465 TYR C -5 REMARK 465 GLU C 197 REMARK 465 PRO C 198 REMARK 465 ARG C 199 REMARK 465 PHE C 200 REMARK 465 GLN C 201 REMARK 465 GLY C 202 REMARK 465 GLN C 203 REMARK 465 THR C 204 REMARK 465 LYS C 205 REMARK 465 TRP C 206 REMARK 465 GLY C 257 REMARK 465 GLU C 315 REMARK 465 LYS C 316 REMARK 465 LEU C 317 REMARK 465 ASN C 318 REMARK 465 MET D -22 REMARK 465 HIS D -21 REMARK 465 HIS D -20 REMARK 465 HIS D -19 REMARK 465 HIS D -18 REMARK 465 HIS D -17 REMARK 465 HIS D -16 REMARK 465 SER D -15 REMARK 465 SER D -14 REMARK 465 GLY D -13 REMARK 465 VAL D -12 REMARK 465 ASP D -11 REMARK 465 LEU D -10 REMARK 465 GLY D -9 REMARK 465 THR D -8 REMARK 465 GLU D -7 REMARK 465 ASN D -6 REMARK 465 LEU D -5 REMARK 465 TYR D -4 REMARK 465 SER D 124 REMARK 465 ARG D 125 REMARK 465 GLN D 126 REMARK 465 GLY D 127 REMARK 465 GLU D 128 REMARK 465 ASP D 196 REMARK 465 ARG D 197 REMARK 465 GLU D 198 REMARK 465 PRO D 199 REMARK 465 ARG D 200 REMARK 465 PHE D 201 REMARK 465 GLN D 202 REMARK 465 GLY D 203 REMARK 465 GLN D 204 REMARK 465 THR D 205 REMARK 465 LYS D 206 REMARK 465 THR D 253 REMARK 465 ILE D 254 REMARK 465 THR D 255 REMARK 465 LEU D 256 REMARK 465 GLY D 257 REMARK 465 VAL D 258 REMARK 465 GLU D 315 REMARK 465 LYS D 316 REMARK 465 LEU D 317 REMARK 465 ASN D 318 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 GLN A 52 CG CD OE1 NE2 REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 MET A 146 CG SD CE REMARK 470 GLU A 148 CG CD OE1 OE2 REMARK 470 ILE A 151 CG1 CG2 CD1 REMARK 470 ASN A 154 CG OD1 ND2 REMARK 470 LYS A 170 CG CD CE NZ REMARK 470 LYS A 180 CG CD CE NZ REMARK 470 ARG A 189 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 197 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 208 CG OD1 ND2 REMARK 470 TYR A 209 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TRP A 210 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 210 CZ3 CH2 REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 252 CG CD CE NZ REMARK 470 ASP A 259 CG OD1 OD2 REMARK 470 GLU B 19 CG CD OE1 OE2 REMARK 470 GLU B 27 CG CD OE1 OE2 REMARK 470 LYS B 33 CG CD CE NZ REMARK 470 LYS B 46 CG CD CE NZ REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 ASP B 109 CG OD1 OD2 REMARK 470 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 470 SER B 124 OG REMARK 470 GLN B 133 CG CD OE1 NE2 REMARK 470 LYS B 137 CG CD CE NZ REMARK 470 LYS B 141 CG CD CE NZ REMARK 470 ARG B 145 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 148 CG CD OE1 OE2 REMARK 470 ILE B 149 CG1 CG2 CD1 REMARK 470 ILE B 151 CG1 CG2 CD1 REMARK 470 LYS B 170 CG CD CE NZ REMARK 470 LYS B 180 CG CD CE NZ REMARK 470 ARG B 197 CG CD NE CZ NH1 NH2 REMARK 470 THR B 205 OG1 CG2 REMARK 470 LYS B 206 CG CD CE NZ REMARK 470 TRP B 207 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 207 CZ3 CH2 REMARK 470 ASN B 208 CG OD1 ND2 REMARK 470 TRP B 210 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 210 CZ3 CH2 REMARK 470 LYS B 211 CG CD CE NZ REMARK 470 LYS B 229 CG CD CE NZ REMARK 470 TYR B 233 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE B 248 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE B 250 CG1 CG2 CD1 REMARK 470 LEU B 251 CG CD1 CD2 REMARK 470 VAL B 258 CG1 CG2 REMARK 470 LEU B 314 CG CD1 CD2 REMARK 470 GLU B 315 CG CD OE1 OE2 REMARK 470 LYS B 316 CG CD CE NZ REMARK 470 PHE C -4 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU C 18 CG CD OE1 OE2 REMARK 470 GLU C 26 CG CD OE1 OE2 REMARK 470 LYS C 32 CG CD CE NZ REMARK 470 LYS C 47 CG CD CE NZ REMARK 470 LYS C 50 CG CD CE NZ REMARK 470 GLU C 105 CG CD OE1 OE2 REMARK 470 ARG C 121 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 125 CG CD OE1 NE2 REMARK 470 GLU C 127 CG CD OE1 OE2 REMARK 470 THR C 128 OG1 CG2 REMARK 470 TRP C 129 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 129 CZ3 CH2 REMARK 470 LYS C 131 CG CD CE NZ REMARK 470 GLN C 132 CG CD OE1 NE2 REMARK 470 LYS C 136 CG CD CE NZ REMARK 470 LYS C 140 CG CD CE NZ REMARK 470 ARG C 144 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 147 CG CD OE1 OE2 REMARK 470 ILE C 148 CG1 CG2 CD1 REMARK 470 ILE C 150 CG1 CG2 CD1 REMARK 470 LYS C 169 CG CD CE NZ REMARK 470 LYS C 179 CG CD CE NZ REMARK 470 ARG C 196 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 210 CG CD CE NZ REMARK 470 LYS C 228 CG CD CE NZ REMARK 470 LEU C 250 CG CD1 CD2 REMARK 470 LYS C 251 CG CD CE NZ REMARK 470 THR C 252 OG1 CG2 REMARK 470 ILE C 253 CG1 CG2 CD1 REMARK 470 THR C 254 OG1 CG2 REMARK 470 LEU C 255 CG CD1 CD2 REMARK 470 VAL C 258 CG1 CG2 REMARK 470 ASP C 259 CG OD1 OD2 REMARK 470 LEU C 314 CG CD1 CD2 REMARK 470 GLU D 19 CG CD OE1 OE2 REMARK 470 LYS D 33 CG CD CE NZ REMARK 470 LYS D 48 CG CD CE NZ REMARK 470 LYS D 51 CG CD CE NZ REMARK 470 GLU D 106 CG CD OE1 OE2 REMARK 470 LYS D 110 CG CD CE NZ REMARK 470 ARG D 122 CG CD NE CZ NH1 NH2 REMARK 470 THR D 129 OG1 CG2 REMARK 470 TRP D 130 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 130 CZ3 CH2 REMARK 470 LYS D 132 CG CD CE NZ REMARK 470 GLN D 133 CG CD OE1 NE2 REMARK 470 LYS D 137 CG CD CE NZ REMARK 470 LYS D 141 CG CD CE NZ REMARK 470 ARG D 145 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 148 CG CD OE1 OE2 REMARK 470 GLN D 171 CG CD OE1 NE2 REMARK 470 LYS D 180 CG CD CE NZ REMARK 470 TRP D 207 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 207 CZ3 CH2 REMARK 470 ASN D 208 CG OD1 ND2 REMARK 470 TRP D 210 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 210 CZ3 CH2 REMARK 470 LYS D 211 CG CD CE NZ REMARK 470 LEU D 212 CG CD1 CD2 REMARK 470 LYS D 229 CG CD CE NZ REMARK 470 TYR D 245 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE D 248 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU D 251 CG CD1 CD2 REMARK 470 LYS D 252 CG CD CE NZ REMARK 470 LEU D 314 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP D 96 O1A UDP D 401 2.11 REMARK 500 O PRO A 152 N ASN A 154 2.13 REMARK 500 NE2 GLN C 97 O1B UDP C 401 2.16 REMARK 500 OG SER B 6 O GLN B 86 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 43 62.21 -102.62 REMARK 500 LYS A 48 33.68 -89.20 REMARK 500 ALA A 120 79.77 -119.25 REMARK 500 SER A 124 -67.80 -91.58 REMARK 500 ARG A 125 -151.34 57.08 REMARK 500 GLN A 126 163.10 66.16 REMARK 500 THR A 147 -101.28 53.22 REMARK 500 GLU A 148 13.89 59.12 REMARK 500 ILE A 151 -59.01 -156.32 REMARK 500 PRO A 153 -48.00 28.53 REMARK 500 ASN A 154 162.53 75.44 REMARK 500 ASP A 157 23.60 -77.49 REMARK 500 ARG A 177 67.74 -114.00 REMARK 500 TYR A 188 178.03 63.91 REMARK 500 SER A 224 -51.91 -136.72 REMARK 500 PHE A 248 19.89 -142.92 REMARK 500 PRO A 261 109.84 -34.43 REMARK 500 ASP B 43 64.69 -102.69 REMARK 500 ASP B 47 36.08 -96.10 REMARK 500 LEU B 97 60.40 65.18 REMARK 500 VAL B 142 -53.72 -128.08 REMARK 500 MET B 146 79.44 -108.34 REMARK 500 ARG B 177 59.97 -110.70 REMARK 500 TYR B 188 -179.76 61.47 REMARK 500 LYS B 206 -155.88 56.57 REMARK 500 TRP B 207 -7.37 65.44 REMARK 500 ALA B 264 3.69 -68.13 REMARK 500 SER B 265 -38.19 -138.08 REMARK 500 ASP C 42 65.17 -104.25 REMARK 500 ASP C 46 -149.04 -97.95 REMARK 500 THR C 154 -169.05 -125.90 REMARK 500 ARG C 176 48.12 -105.61 REMARK 500 TYR C 187 -179.65 -67.36 REMARK 500 LYS C 251 75.90 -106.98 REMARK 500 ILE C 253 29.38 -79.47 REMARK 500 THR C 254 -163.23 -167.50 REMARK 500 VAL C 260 -112.85 -100.69 REMARK 500 ASP D 43 57.60 -103.48 REMARK 500 ASP D 47 35.52 -86.28 REMARK 500 GLN D 86 56.05 -109.15 REMARK 500 VAL D 142 -32.72 -135.23 REMARK 500 PRO D 153 31.74 -91.27 REMARK 500 ARG D 177 59.64 -108.78 REMARK 500 TYR D 188 176.85 62.52 REMARK 500 ASN D 208 98.56 60.07 REMARK 500 SER D 242 -73.38 -62.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 96 OD1 REMARK 620 2 ASP A 96 OD2 63.3 REMARK 620 3 UDP A 401 O1A 106.0 88.4 REMARK 620 4 UDP A 401 O1B 169.1 117.6 63.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 96 OD2 REMARK 620 2 GLN B 98 OE1 109.1 REMARK 620 3 UDP B 401 O5' 79.2 158.0 REMARK 620 4 UDP B 401 O1A 93.8 137.5 59.1 REMARK 620 5 UDP B 401 O1B 158.2 92.2 82.6 66.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 95 OD1 REMARK 620 2 ASP C 95 OD2 62.7 REMARK 620 3 GLN C 97 OE1 104.4 125.5 REMARK 620 4 UDP C 401 O1A 117.5 80.4 137.9 REMARK 620 5 UDP C 401 O1B 171.3 117.9 82.4 55.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 96 OD1 REMARK 620 2 ASP D 96 OD2 63.0 REMARK 620 3 UDP D 401 O1A 122.5 59.9 REMARK 620 4 UDP D 401 O1B 156.4 121.8 64.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EKP RELATED DB: PDB DBREF 5EKE A 2 318 UNP Q55487 Y501_SYNY3 2 318 DBREF 5EKE B 2 318 UNP Q55487 Y501_SYNY3 2 318 DBREF 5EKE C 1 318 UNP Q55487 Y501_SYNY3 2 318 DBREF 5EKE D 2 318 UNP Q55487 Y501_SYNY3 2 318 SEQADV 5EKE MET A -22 UNP Q55487 INITIATING METHIONINE SEQADV 5EKE HIS A -21 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS A -20 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS A -19 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS A -18 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS A -17 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS A -16 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER A -15 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER A -14 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLY A -13 UNP Q55487 EXPRESSION TAG SEQADV 5EKE VAL A -12 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASP A -11 UNP Q55487 EXPRESSION TAG SEQADV 5EKE LEU A -10 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLY A -9 UNP Q55487 EXPRESSION TAG SEQADV 5EKE THR A -8 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLU A -7 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASN A -6 UNP Q55487 EXPRESSION TAG SEQADV 5EKE LEU A -5 UNP Q55487 EXPRESSION TAG SEQADV 5EKE TYR A -4 UNP Q55487 EXPRESSION TAG SEQADV 5EKE PHE A -3 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLN A -2 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER A -1 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASN A 0 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ALA A 1 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ALA A 215 UNP Q55487 PHE 215 ENGINEERED MUTATION SEQADV 5EKE MET B -22 UNP Q55487 INITIATING METHIONINE SEQADV 5EKE HIS B -21 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS B -20 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS B -19 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS B -18 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS B -17 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS B -16 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER B -15 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER B -14 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLY B -13 UNP Q55487 EXPRESSION TAG SEQADV 5EKE VAL B -12 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASP B -11 UNP Q55487 EXPRESSION TAG SEQADV 5EKE LEU B -10 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLY B -9 UNP Q55487 EXPRESSION TAG SEQADV 5EKE THR B -8 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLU B -7 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASN B -6 UNP Q55487 EXPRESSION TAG SEQADV 5EKE LEU B -5 UNP Q55487 EXPRESSION TAG SEQADV 5EKE TYR B -4 UNP Q55487 EXPRESSION TAG SEQADV 5EKE PHE B -3 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLN B -2 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER B -1 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASN B 0 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ALA B 1 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ALA B 215 UNP Q55487 PHE 215 ENGINEERED MUTATION SEQADV 5EKE MET C -23 UNP Q55487 INITIATING METHIONINE SEQADV 5EKE HIS C -22 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS C -21 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS C -20 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS C -19 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS C -18 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS C -17 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER C -16 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER C -15 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLY C -14 UNP Q55487 EXPRESSION TAG SEQADV 5EKE VAL C -13 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASP C -12 UNP Q55487 EXPRESSION TAG SEQADV 5EKE LEU C -11 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLY C -10 UNP Q55487 EXPRESSION TAG SEQADV 5EKE THR C -9 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLU C -8 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASN C -7 UNP Q55487 EXPRESSION TAG SEQADV 5EKE LEU C -6 UNP Q55487 EXPRESSION TAG SEQADV 5EKE TYR C -5 UNP Q55487 EXPRESSION TAG SEQADV 5EKE PHE C -4 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLN C -3 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER C -2 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASN C -1 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ALA C 0 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ALA C 214 UNP Q55487 PHE 215 ENGINEERED MUTATION SEQADV 5EKE MET D -22 UNP Q55487 INITIATING METHIONINE SEQADV 5EKE HIS D -21 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS D -20 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS D -19 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS D -18 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS D -17 UNP Q55487 EXPRESSION TAG SEQADV 5EKE HIS D -16 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER D -15 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER D -14 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLY D -13 UNP Q55487 EXPRESSION TAG SEQADV 5EKE VAL D -12 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASP D -11 UNP Q55487 EXPRESSION TAG SEQADV 5EKE LEU D -10 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLY D -9 UNP Q55487 EXPRESSION TAG SEQADV 5EKE THR D -8 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLU D -7 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASN D -6 UNP Q55487 EXPRESSION TAG SEQADV 5EKE LEU D -5 UNP Q55487 EXPRESSION TAG SEQADV 5EKE TYR D -4 UNP Q55487 EXPRESSION TAG SEQADV 5EKE PHE D -3 UNP Q55487 EXPRESSION TAG SEQADV 5EKE GLN D -2 UNP Q55487 EXPRESSION TAG SEQADV 5EKE SER D -1 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ASN D 0 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ALA D 1 UNP Q55487 EXPRESSION TAG SEQADV 5EKE ALA D 215 UNP Q55487 PHE 215 ENGINEERED MUTATION SEQRES 1 A 341 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 341 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA THR ILE SEQRES 3 A 341 GLU LEU SER ILE VAL ILE PRO MET TYR ASN GLU GLU ASP SEQRES 4 A 341 ASN LEU GLU HIS LEU PHE ALA ARG LEU LEU GLU VAL LEU SEQRES 5 A 341 THR PRO LEU LYS ILE THR TYR GLU ILE ILE CYS VAL ASN SEQRES 6 A 341 ASP GLY SER LYS ASP LYS THR LEU LYS GLN LEU ILE ASP SEQRES 7 A 341 CYS TYR GLN SER ASN ARG GLN ILE LYS ILE VAL ASN LEU SEQRES 8 A 341 SER ARG ASN PHE GLY LYS GLU ILE ALA LEU SER ALA GLY SEQRES 9 A 341 ILE ASP TYR ALA GLN GLY ASN ALA VAL ILE PRO ILE ASP SEQRES 10 A 341 ALA ASP LEU GLN ASP PRO PRO GLU LEU ILE HIS GLU LEU SEQRES 11 A 341 VAL ASP LYS TRP ARG GLU GLY TYR ASP ILE VAL TYR ALA SEQRES 12 A 341 THR ARG ARG SER ARG GLN GLY GLU THR TRP VAL LYS GLN SEQRES 13 A 341 PHE THR ALA LYS MET PHE TYR LYS VAL ILE GLY ARG MET SEQRES 14 A 341 THR GLU ILE LYS ILE PRO PRO ASN THR GLY ASP PHE ARG SEQRES 15 A 341 LEU MET ASP ARG LYS VAL VAL ASN ALA ILE LYS GLN LEU SEQRES 16 A 341 PRO GLU ARG THR ARG PHE MET LYS GLY LEU PHE ALA TRP SEQRES 17 A 341 VAL GLY TYR ARG GLN THR PHE VAL LEU PHE ASP ARG GLU SEQRES 18 A 341 PRO ARG PHE GLN GLY GLN THR LYS TRP ASN TYR TRP LYS SEQRES 19 A 341 LEU TRP ASN ALA ALA LEU ASP GLY ILE PHE SER PHE SER SEQRES 20 A 341 LEU LEU PRO LEU LYS VAL TRP THR TYR LEU GLY SER ILE SEQRES 21 A 341 ILE SER LEU LEU SER LEU ALA TYR ALA SER PHE LEU ILE SEQRES 22 A 341 LEU LYS THR ILE THR LEU GLY VAL ASP VAL PRO GLY TYR SEQRES 23 A 341 ALA SER LEU MET VAL ALA ILE LEU PHE LEU GLY GLY VAL SEQRES 24 A 341 GLN LEU ILE SER LEU GLY VAL ILE GLY GLU TYR LEU GLY SEQRES 25 A 341 ARG VAL TYR GLU GLU VAL LYS ALA ARG PRO LEU TYR LEU SEQRES 26 A 341 VAL SER ASP LEU TRP GLY LEU GLU TYR LEU PRO LEU GLU SEQRES 27 A 341 LYS LEU ASN SEQRES 1 B 341 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 341 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA THR ILE SEQRES 3 B 341 GLU LEU SER ILE VAL ILE PRO MET TYR ASN GLU GLU ASP SEQRES 4 B 341 ASN LEU GLU HIS LEU PHE ALA ARG LEU LEU GLU VAL LEU SEQRES 5 B 341 THR PRO LEU LYS ILE THR TYR GLU ILE ILE CYS VAL ASN SEQRES 6 B 341 ASP GLY SER LYS ASP LYS THR LEU LYS GLN LEU ILE ASP SEQRES 7 B 341 CYS TYR GLN SER ASN ARG GLN ILE LYS ILE VAL ASN LEU SEQRES 8 B 341 SER ARG ASN PHE GLY LYS GLU ILE ALA LEU SER ALA GLY SEQRES 9 B 341 ILE ASP TYR ALA GLN GLY ASN ALA VAL ILE PRO ILE ASP SEQRES 10 B 341 ALA ASP LEU GLN ASP PRO PRO GLU LEU ILE HIS GLU LEU SEQRES 11 B 341 VAL ASP LYS TRP ARG GLU GLY TYR ASP ILE VAL TYR ALA SEQRES 12 B 341 THR ARG ARG SER ARG GLN GLY GLU THR TRP VAL LYS GLN SEQRES 13 B 341 PHE THR ALA LYS MET PHE TYR LYS VAL ILE GLY ARG MET SEQRES 14 B 341 THR GLU ILE LYS ILE PRO PRO ASN THR GLY ASP PHE ARG SEQRES 15 B 341 LEU MET ASP ARG LYS VAL VAL ASN ALA ILE LYS GLN LEU SEQRES 16 B 341 PRO GLU ARG THR ARG PHE MET LYS GLY LEU PHE ALA TRP SEQRES 17 B 341 VAL GLY TYR ARG GLN THR PHE VAL LEU PHE ASP ARG GLU SEQRES 18 B 341 PRO ARG PHE GLN GLY GLN THR LYS TRP ASN TYR TRP LYS SEQRES 19 B 341 LEU TRP ASN ALA ALA LEU ASP GLY ILE PHE SER PHE SER SEQRES 20 B 341 LEU LEU PRO LEU LYS VAL TRP THR TYR LEU GLY SER ILE SEQRES 21 B 341 ILE SER LEU LEU SER LEU ALA TYR ALA SER PHE LEU ILE SEQRES 22 B 341 LEU LYS THR ILE THR LEU GLY VAL ASP VAL PRO GLY TYR SEQRES 23 B 341 ALA SER LEU MET VAL ALA ILE LEU PHE LEU GLY GLY VAL SEQRES 24 B 341 GLN LEU ILE SER LEU GLY VAL ILE GLY GLU TYR LEU GLY SEQRES 25 B 341 ARG VAL TYR GLU GLU VAL LYS ALA ARG PRO LEU TYR LEU SEQRES 26 B 341 VAL SER ASP LEU TRP GLY LEU GLU TYR LEU PRO LEU GLU SEQRES 27 B 341 LYS LEU ASN SEQRES 1 C 341 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 C 341 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA THR ILE SEQRES 3 C 341 GLU LEU SER ILE VAL ILE PRO MET TYR ASN GLU GLU ASP SEQRES 4 C 341 ASN LEU GLU HIS LEU PHE ALA ARG LEU LEU GLU VAL LEU SEQRES 5 C 341 THR PRO LEU LYS ILE THR TYR GLU ILE ILE CYS VAL ASN SEQRES 6 C 341 ASP GLY SER LYS ASP LYS THR LEU LYS GLN LEU ILE ASP SEQRES 7 C 341 CYS TYR GLN SER ASN ARG GLN ILE LYS ILE VAL ASN LEU SEQRES 8 C 341 SER ARG ASN PHE GLY LYS GLU ILE ALA LEU SER ALA GLY SEQRES 9 C 341 ILE ASP TYR ALA GLN GLY ASN ALA VAL ILE PRO ILE ASP SEQRES 10 C 341 ALA ASP LEU GLN ASP PRO PRO GLU LEU ILE HIS GLU LEU SEQRES 11 C 341 VAL ASP LYS TRP ARG GLU GLY TYR ASP ILE VAL TYR ALA SEQRES 12 C 341 THR ARG ARG SER ARG GLN GLY GLU THR TRP VAL LYS GLN SEQRES 13 C 341 PHE THR ALA LYS MET PHE TYR LYS VAL ILE GLY ARG MET SEQRES 14 C 341 THR GLU ILE LYS ILE PRO PRO ASN THR GLY ASP PHE ARG SEQRES 15 C 341 LEU MET ASP ARG LYS VAL VAL ASN ALA ILE LYS GLN LEU SEQRES 16 C 341 PRO GLU ARG THR ARG PHE MET LYS GLY LEU PHE ALA TRP SEQRES 17 C 341 VAL GLY TYR ARG GLN THR PHE VAL LEU PHE ASP ARG GLU SEQRES 18 C 341 PRO ARG PHE GLN GLY GLN THR LYS TRP ASN TYR TRP LYS SEQRES 19 C 341 LEU TRP ASN ALA ALA LEU ASP GLY ILE PHE SER PHE SER SEQRES 20 C 341 LEU LEU PRO LEU LYS VAL TRP THR TYR LEU GLY SER ILE SEQRES 21 C 341 ILE SER LEU LEU SER LEU ALA TYR ALA SER PHE LEU ILE SEQRES 22 C 341 LEU LYS THR ILE THR LEU GLY VAL ASP VAL PRO GLY TYR SEQRES 23 C 341 ALA SER LEU MET VAL ALA ILE LEU PHE LEU GLY GLY VAL SEQRES 24 C 341 GLN LEU ILE SER LEU GLY VAL ILE GLY GLU TYR LEU GLY SEQRES 25 C 341 ARG VAL TYR GLU GLU VAL LYS ALA ARG PRO LEU TYR LEU SEQRES 26 C 341 VAL SER ASP LEU TRP GLY LEU GLU TYR LEU PRO LEU GLU SEQRES 27 C 341 LYS LEU ASN SEQRES 1 D 341 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 D 341 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA THR ILE SEQRES 3 D 341 GLU LEU SER ILE VAL ILE PRO MET TYR ASN GLU GLU ASP SEQRES 4 D 341 ASN LEU GLU HIS LEU PHE ALA ARG LEU LEU GLU VAL LEU SEQRES 5 D 341 THR PRO LEU LYS ILE THR TYR GLU ILE ILE CYS VAL ASN SEQRES 6 D 341 ASP GLY SER LYS ASP LYS THR LEU LYS GLN LEU ILE ASP SEQRES 7 D 341 CYS TYR GLN SER ASN ARG GLN ILE LYS ILE VAL ASN LEU SEQRES 8 D 341 SER ARG ASN PHE GLY LYS GLU ILE ALA LEU SER ALA GLY SEQRES 9 D 341 ILE ASP TYR ALA GLN GLY ASN ALA VAL ILE PRO ILE ASP SEQRES 10 D 341 ALA ASP LEU GLN ASP PRO PRO GLU LEU ILE HIS GLU LEU SEQRES 11 D 341 VAL ASP LYS TRP ARG GLU GLY TYR ASP ILE VAL TYR ALA SEQRES 12 D 341 THR ARG ARG SER ARG GLN GLY GLU THR TRP VAL LYS GLN SEQRES 13 D 341 PHE THR ALA LYS MET PHE TYR LYS VAL ILE GLY ARG MET SEQRES 14 D 341 THR GLU ILE LYS ILE PRO PRO ASN THR GLY ASP PHE ARG SEQRES 15 D 341 LEU MET ASP ARG LYS VAL VAL ASN ALA ILE LYS GLN LEU SEQRES 16 D 341 PRO GLU ARG THR ARG PHE MET LYS GLY LEU PHE ALA TRP SEQRES 17 D 341 VAL GLY TYR ARG GLN THR PHE VAL LEU PHE ASP ARG GLU SEQRES 18 D 341 PRO ARG PHE GLN GLY GLN THR LYS TRP ASN TYR TRP LYS SEQRES 19 D 341 LEU TRP ASN ALA ALA LEU ASP GLY ILE PHE SER PHE SER SEQRES 20 D 341 LEU LEU PRO LEU LYS VAL TRP THR TYR LEU GLY SER ILE SEQRES 21 D 341 ILE SER LEU LEU SER LEU ALA TYR ALA SER PHE LEU ILE SEQRES 22 D 341 LEU LYS THR ILE THR LEU GLY VAL ASP VAL PRO GLY TYR SEQRES 23 D 341 ALA SER LEU MET VAL ALA ILE LEU PHE LEU GLY GLY VAL SEQRES 24 D 341 GLN LEU ILE SER LEU GLY VAL ILE GLY GLU TYR LEU GLY SEQRES 25 D 341 ARG VAL TYR GLU GLU VAL LYS ALA ARG PRO LEU TYR LEU SEQRES 26 D 341 VAL SER ASP LEU TRP GLY LEU GLU TYR LEU PRO LEU GLU SEQRES 27 D 341 LYS LEU ASN HET UDP A 401 25 HET MG A 402 1 HET UDP B 401 25 HET MG B 402 1 HET UDP C 401 25 HET MG C 402 1 HET UDP D 401 25 HET MG D 402 1 HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 5 UDP 4(C9 H14 N2 O12 P2) FORMUL 6 MG 4(MG 2+) HELIX 1 AA1 ASN A 17 THR A 30 1 14 HELIX 2 AA2 PRO A 31 LYS A 33 5 3 HELIX 3 AA3 LYS A 48 ASN A 60 1 13 HELIX 4 AA4 GLY A 73 TYR A 84 1 12 HELIX 5 AA5 GLU A 102 GLU A 113 1 12 HELIX 6 AA6 ARG A 163 ILE A 169 1 7 HELIX 7 AA7 LEU A 172 LYS A 180 5 9 HELIX 8 AA8 GLY A 181 GLY A 187 1 7 HELIX 9 AA9 TYR A 209 PHE A 221 1 13 HELIX 10 AB1 LEU A 225 PHE A 248 1 24 HELIX 11 AB2 LEU A 249 THR A 255 1 7 HELIX 12 AB3 PRO A 261 LYS A 296 1 36 HELIX 13 AB4 ASN B 17 THR B 30 1 14 HELIX 14 AB5 PRO B 31 LYS B 33 5 3 HELIX 15 AB6 LYS B 48 SER B 59 1 12 HELIX 16 AB7 GLY B 73 TYR B 84 1 12 HELIX 17 AB8 PRO B 100 GLU B 102 5 3 HELIX 18 AB9 LEU B 103 GLY B 114 1 12 HELIX 19 AC1 PHE B 134 TYR B 140 1 7 HELIX 20 AC2 MET B 146 ILE B 151 5 6 HELIX 21 AC3 ARG B 163 ILE B 169 1 7 HELIX 22 AC4 LEU B 172 THR B 176 5 5 HELIX 23 AC5 ARG B 177 LYS B 180 5 4 HELIX 24 AC6 GLY B 181 GLY B 187 1 7 HELIX 25 AC7 ASN B 208 PHE B 223 1 16 HELIX 26 AC8 LEU B 225 ILE B 250 1 26 HELIX 27 AC9 GLY B 262 LYS B 296 1 35 HELIX 28 AD1 ASN C 16 THR C 29 1 14 HELIX 29 AD2 PRO C 30 LYS C 32 5 3 HELIX 30 AD3 LYS C 47 ASN C 59 1 13 HELIX 31 AD4 GLY C 72 TYR C 83 1 12 HELIX 32 AD5 PRO C 99 GLU C 101 5 3 HELIX 33 AD6 LEU C 102 GLY C 113 1 12 HELIX 34 AD7 THR C 128 TYR C 139 1 12 HELIX 35 AD8 GLY C 143 LYS C 149 5 7 HELIX 36 AD9 ARG C 162 ILE C 168 1 7 HELIX 37 AE1 LEU C 171 LYS C 179 5 9 HELIX 38 AE2 GLY C 180 GLY C 186 1 7 HELIX 39 AE3 TYR C 208 PHE C 222 1 15 HELIX 40 AE4 LEU C 224 LEU C 250 1 27 HELIX 41 AE5 GLY C 262 LYS C 296 1 35 HELIX 42 AE6 ASN D 17 THR D 30 1 14 HELIX 43 AE7 PRO D 31 LYS D 33 5 3 HELIX 44 AE8 LYS D 48 SER D 59 1 12 HELIX 45 AE9 GLY D 73 TYR D 84 1 12 HELIX 46 AF1 GLU D 102 GLU D 113 1 12 HELIX 47 AF2 TRP D 130 TYR D 140 1 11 HELIX 48 AF3 ARG D 163 ILE D 169 1 7 HELIX 49 AF4 LEU D 172 LYS D 180 5 9 HELIX 50 AF5 GLY D 181 GLY D 187 1 7 HELIX 51 AF6 ASN D 208 TRP D 213 1 6 HELIX 52 AF7 TRP D 213 PHE D 223 1 11 HELIX 53 AF8 LEU D 225 ALA D 246 1 22 HELIX 54 AF9 SER D 247 LEU D 251 5 5 HELIX 55 AG1 GLY D 262 LYS D 296 1 35 SHEET 1 AA1 8 GLN A 190 PHE A 195 0 SHEET 2 AA1 8 ILE A 117 ARG A 122 1 N TYR A 119 O THR A 191 SHEET 3 AA1 8 ARG A 159 ASP A 162 -1 O LEU A 160 N VAL A 118 SHEET 4 AA1 8 ALA A 89 PRO A 92 -1 N VAL A 90 O MET A 161 SHEET 5 AA1 8 LEU A 5 MET A 11 1 N SER A 6 O ILE A 91 SHEET 6 AA1 8 TYR A 36 ASN A 42 1 O ILE A 39 N ILE A 7 SHEET 7 AA1 8 ILE A 63 LEU A 68 1 O LYS A 64 N CYS A 40 SHEET 8 AA1 8 VAL A 303 TRP A 307 -1 O SER A 304 N ASN A 67 SHEET 1 AA2 8 GLN B 190 PHE B 195 0 SHEET 2 AA2 8 ILE B 117 ARG B 122 1 N TYR B 119 O THR B 191 SHEET 3 AA2 8 ARG B 159 ASP B 162 -1 O LEU B 160 N VAL B 118 SHEET 4 AA2 8 ALA B 89 PRO B 92 -1 N VAL B 90 O MET B 161 SHEET 5 AA2 8 LEU B 5 MET B 11 1 N SER B 6 O ILE B 91 SHEET 6 AA2 8 TYR B 36 ASN B 42 1 O VAL B 41 N MET B 11 SHEET 7 AA2 8 ILE B 63 LEU B 68 1 O LYS B 64 N CYS B 40 SHEET 8 AA2 8 VAL B 303 TRP B 307 -1 O SER B 304 N ASN B 67 SHEET 1 AA3 8 GLN C 189 PHE C 194 0 SHEET 2 AA3 8 ILE C 116 ARG C 121 1 N TYR C 118 O THR C 190 SHEET 3 AA3 8 ARG C 158 ASP C 161 -1 O LEU C 159 N VAL C 117 SHEET 4 AA3 8 ALA C 88 PRO C 91 -1 N VAL C 89 O MET C 160 SHEET 5 AA3 8 LEU C 4 MET C 10 1 N SER C 5 O ILE C 90 SHEET 6 AA3 8 TYR C 35 ASN C 41 1 O VAL C 40 N MET C 10 SHEET 7 AA3 8 ILE C 62 LEU C 67 1 O LYS C 63 N CYS C 39 SHEET 8 AA3 8 VAL C 303 TRP C 307 -1 O SER C 304 N ASN C 66 SHEET 1 AA4 8 GLN D 190 PHE D 195 0 SHEET 2 AA4 8 ILE D 117 ARG D 122 1 N TYR D 119 O THR D 191 SHEET 3 AA4 8 ARG D 159 ASP D 162 -1 O LEU D 160 N VAL D 118 SHEET 4 AA4 8 ALA D 89 PRO D 92 -1 N VAL D 90 O MET D 161 SHEET 5 AA4 8 LEU D 5 MET D 11 1 N SER D 6 O ILE D 91 SHEET 6 AA4 8 TYR D 36 ASN D 42 1 O ILE D 39 N ILE D 7 SHEET 7 AA4 8 ILE D 63 LEU D 68 1 O LYS D 64 N CYS D 40 SHEET 8 AA4 8 VAL D 303 TRP D 307 -1 O SER D 304 N ASN D 67 LINK OD1 ASP A 96 MG MG A 402 1555 1555 2.15 LINK OD2 ASP A 96 MG MG A 402 1555 1555 2.02 LINK O1A UDP A 401 MG MG A 402 1555 1555 2.35 LINK O1B UDP A 401 MG MG A 402 1555 1555 2.21 LINK OD2 ASP B 96 MG MG B 402 1555 1555 2.12 LINK OE1 GLN B 98 MG MG B 402 1555 1555 2.08 LINK O5' UDP B 401 MG MG B 402 1555 1555 2.91 LINK O1A UDP B 401 MG MG B 402 1555 1555 1.95 LINK O1B UDP B 401 MG MG B 402 1555 1555 2.42 LINK OD1 ASP C 95 MG MG C 402 1555 1555 2.17 LINK OD2 ASP C 95 MG MG C 402 1555 1555 2.04 LINK OE1 GLN C 97 MG MG C 402 1555 1555 2.16 LINK O1A UDP C 401 MG MG C 402 1555 1555 2.72 LINK O1B UDP C 401 MG MG C 402 1555 1555 2.13 LINK OD1 ASP D 96 MG MG D 402 1555 1555 2.14 LINK OD2 ASP D 96 MG MG D 402 1555 1555 2.06 LINK O1A UDP D 401 MG MG D 402 1555 1555 2.16 LINK O1B UDP D 401 MG MG D 402 1555 1555 2.27 CISPEP 1 LEU A 312 PRO A 313 0 1.24 CISPEP 2 LEU C 312 PRO C 313 0 -0.08 CISPEP 3 PRO D 152 PRO D 153 0 -0.04 CISPEP 4 LEU D 312 PRO D 313 0 -0.33 SITE 1 AC1 11 PRO A 10 MET A 11 TYR A 12 GLU A 14 SITE 2 AC1 11 ASP A 43 ASN A 71 LYS A 74 ASP A 94 SITE 3 AC1 11 ALA A 95 ASP A 96 MG A 402 SITE 1 AC2 2 ASP A 96 UDP A 401 SITE 1 AC3 11 PRO B 10 MET B 11 TYR B 12 ASP B 43 SITE 2 AC3 11 ASN B 71 PHE B 72 LYS B 74 ALA B 95 SITE 3 AC3 11 ASP B 96 GLN B 98 MG B 402 SITE 1 AC4 3 ASP B 96 GLN B 98 UDP B 401 SITE 1 AC5 11 PRO C 9 MET C 10 TYR C 11 GLU C 13 SITE 2 AC5 11 ASP C 42 ASN C 70 LYS C 73 ALA C 94 SITE 3 AC5 11 ASP C 95 GLN C 97 MG C 402 SITE 1 AC6 3 ASP C 95 GLN C 97 UDP C 401 SITE 1 AC7 10 PRO D 10 MET D 11 TYR D 12 GLU D 14 SITE 2 AC7 10 ASP D 43 ASN D 71 LYS D 74 ALA D 95 SITE 3 AC7 10 ASP D 96 MG D 402 SITE 1 AC8 3 ASP D 96 GLN D 98 UDP D 401 CRYST1 154.135 142.243 102.010 90.00 97.16 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006488 0.000000 0.000815 0.00000 SCALE2 0.000000 0.007030 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009880 0.00000