PDB Short entry for 5H1Y
HEADER    HYDROLASE                               13-OCT-16   5H1Y              
TITLE     CRYSTAL STRUCTURE OF THE DDX41 DEAD DOMAIN IN COMPLEX WITH SO42- AND  
TITLE    2 MG2+                                                                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PROBABLE ATP-DEPENDENT RNA HELICASE DDX41;                 
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 FRAGMENT: UNP RESIDUES 153-410;                                      
COMPND   5 SYNONYM: DEAD BOX PROTEIN 41,DEAD BOX PROTEIN ABSTRAKT HOMOLOG;      
COMPND   6 EC: 3.6.4.13;                                                        
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: DDX41, ABS;                                                    
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI-PICHIA PASTORIS SHUTTLE VECTOR   
SOURCE   7 PPPARG4;                                                             
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 1182032;                                    
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PPPARG4                                    
KEYWDS    DNA SENSOR CDNS RECEPTOR ATPASE, HYDROLASE                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.JIANG,S.OUYANG,Z.J.LIU                                              
REVDAT   4   20-MAR-24 5H1Y    1       SOURCE                                   
REVDAT   3   08-NOV-23 5H1Y    1       LINK                                     
REVDAT   2   25-JAN-17 5H1Y    1       JRNL                                     
REVDAT   1   18-JAN-17 5H1Y    0                                                
JRNL        AUTH   Y.JIANG,Y.ZHU,W.QIU,Y.J.LIU,G.CHENG,Z.J.LIU,S.OUYANG         
JRNL        TITL   STRUCTURAL AND FUNCTIONAL ANALYSES OF HUMAN DDX41 DEAD       
JRNL        TITL 2 DOMAIN                                                       
JRNL        REF    PROTEIN CELL                  V.   8    72 2017              
JRNL        REFN                   ESSN 1674-8018                               
JRNL        PMID   27928732                                                     
JRNL        DOI    10.1007/S13238-016-0351-9                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.26 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.8.1_1168                                    
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 35.89                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.360                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 23367                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.188                           
REMARK   3   R VALUE            (WORKING SET) : 0.186                           
REMARK   3   FREE R VALUE                     : 0.233                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.140                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1201                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 35.8956 -  4.6946    0.99     2542   159  0.1631 0.1647        
REMARK   3     2  4.6946 -  3.7275    1.00     2504   139  0.1494 0.2006        
REMARK   3     3  3.7275 -  3.2567    1.00     2550   129  0.1699 0.2231        
REMARK   3     4  3.2567 -  2.9591    1.00     2481   138  0.2030 0.2586        
REMARK   3     5  2.9591 -  2.7471    0.99     2462   122  0.2082 0.2825        
REMARK   3     6  2.7471 -  2.5851    0.98     2469   124  0.2189 0.3166        
REMARK   3     7  2.5851 -  2.4557    0.97     2410   130  0.2194 0.3131        
REMARK   3     8  2.4557 -  2.3488    0.97     2424   136  0.2452 0.3306        
REMARK   3     9  2.3488 -  2.2584    0.93     2324   124  0.2580 0.3246        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.290            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.520           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.009           3942                                  
REMARK   3   ANGLE     :  1.234           5294                                  
REMARK   3   CHIRALITY :  0.079            591                                  
REMARK   3   PLANARITY :  0.005            669                                  
REMARK   3   DIHEDRAL  : 14.472           1550                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5H1Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-OCT-16.                  
REMARK 100 THE DEPOSITION ID IS D_1300001865.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 23-JUN-13                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SSRF                               
REMARK 200  BEAMLINE                       : BL17U                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.98                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315R                  
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 23367                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.260                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.6                               
REMARK 200  DATA REDUNDANCY                : 3.400                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.54700                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 21.4000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.33                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 97.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.40                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.340                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 3FE2                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 38.80                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 25% PEG 3,350,    
REMARK 280  0.1M BIS-TRIS, PH 6.5, VAPOR DIFFUSION, HANGING DROP,               
REMARK 280  TEMPERATURE 289.15K                                                 
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       31.37300            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   130                                                      
REMARK 465     HIS A   131                                                      
REMARK 465     HIS A   132                                                      
REMARK 465     HIS A   133                                                      
REMARK 465     HIS A   134                                                      
REMARK 465     HIS A   135                                                      
REMARK 465     HIS A   136                                                      
REMARK 465     SER A   137                                                      
REMARK 465     SER A   138                                                      
REMARK 465     GLY A   139                                                      
REMARK 465     VAL A   140                                                      
REMARK 465     ASP A   141                                                      
REMARK 465     LEU A   142                                                      
REMARK 465     GLY A   143                                                      
REMARK 465     THR A   144                                                      
REMARK 465     GLU A   145                                                      
REMARK 465     ASN A   146                                                      
REMARK 465     LEU A   147                                                      
REMARK 465     TYR A   148                                                      
REMARK 465     PHE A   149                                                      
REMARK 465     GLN A   150                                                      
REMARK 465     SER A   151                                                      
REMARK 465     ASN A   152                                                      
REMARK 465     LEU A   153                                                      
REMARK 465     SER A   154                                                      
REMARK 465     MET A   155                                                      
REMARK 465     SER A   156                                                      
REMARK 465     GLY A   399                                                      
REMARK 465     ARG A   400                                                      
REMARK 465     ALA A   401                                                      
REMARK 465     GLY A   402                                                      
REMARK 465     ALA A   403                                                      
REMARK 465     ALA A   404                                                      
REMARK 465     SER A   405                                                      
REMARK 465     LEU A   406                                                      
REMARK 465     ASP A   407                                                      
REMARK 465     VAL A   408                                                      
REMARK 465     ILE A   409                                                      
REMARK 465     GLN A   410                                                      
REMARK 465     MET B   130                                                      
REMARK 465     HIS B   131                                                      
REMARK 465     HIS B   132                                                      
REMARK 465     HIS B   133                                                      
REMARK 465     HIS B   134                                                      
REMARK 465     HIS B   135                                                      
REMARK 465     HIS B   136                                                      
REMARK 465     SER B   137                                                      
REMARK 465     SER B   138                                                      
REMARK 465     GLY B   139                                                      
REMARK 465     VAL B   140                                                      
REMARK 465     ASP B   141                                                      
REMARK 465     LEU B   142                                                      
REMARK 465     GLY B   143                                                      
REMARK 465     THR B   144                                                      
REMARK 465     GLU B   145                                                      
REMARK 465     ASN B   146                                                      
REMARK 465     LEU B   147                                                      
REMARK 465     TYR B   148                                                      
REMARK 465     PHE B   149                                                      
REMARK 465     GLN B   150                                                      
REMARK 465     SER B   151                                                      
REMARK 465     ASN B   152                                                      
REMARK 465     LEU B   153                                                      
REMARK 465     GLY B   399                                                      
REMARK 465     ARG B   400                                                      
REMARK 465     ALA B   401                                                      
REMARK 465     GLY B   402                                                      
REMARK 465     ALA B   403                                                      
REMARK 465     ALA B   404                                                      
REMARK 465     SER B   405                                                      
REMARK 465     LEU B   406                                                      
REMARK 465     ASP B   407                                                      
REMARK 465     VAL B   408                                                      
REMARK 465     ILE B   409                                                      
REMARK 465     GLN B   410                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   OE1  GLU A   286     O    HOH A   601              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    CYS B 264   CB    CYS B 264   SG     -0.114                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    GLN A 368      146.16    -38.63                                   
REMARK 500    LEU B 250       93.76   -165.10                                   
REMARK 500    MET B 378       59.43   -140.24                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A 684        DISTANCE =  5.93 ANGSTROMS                       
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 502  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 THR A 227   OG1                                                    
REMARK 620 2 GLU A 345   OE2  99.4                                              
REMARK 620 3 HOH A 624   O   102.3 128.5                                        
REMARK 620 N                    1     2                                         
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG B 502  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 THR B 227   OG1                                                    
REMARK 620 2 GLU B 345   OE2  94.8                                              
REMARK 620 3 HOH B 661   O   112.0 114.6                                        
REMARK 620 N                    1     2                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 502                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 501                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 502                  
DBREF  5H1Y A  153   410  UNP    Q9UJV9   DDX41_HUMAN    153    410             
DBREF  5H1Y B  153   410  UNP    Q9UJV9   DDX41_HUMAN    153    410             
SEQADV 5H1Y MET A  130  UNP  Q9UJV9              INITIATING METHIONINE          
SEQADV 5H1Y HIS A  131  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS A  132  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS A  133  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS A  134  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS A  135  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS A  136  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y SER A  137  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y SER A  138  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y GLY A  139  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y VAL A  140  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y ASP A  141  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y LEU A  142  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y GLY A  143  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y THR A  144  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y GLU A  145  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y ASN A  146  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y LEU A  147  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y TYR A  148  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y PHE A  149  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y GLN A  150  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y SER A  151  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y ASN A  152  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y MET B  130  UNP  Q9UJV9              INITIATING METHIONINE          
SEQADV 5H1Y HIS B  131  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS B  132  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS B  133  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS B  134  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS B  135  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y HIS B  136  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y SER B  137  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y SER B  138  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y GLY B  139  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y VAL B  140  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y ASP B  141  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y LEU B  142  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y GLY B  143  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y THR B  144  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y GLU B  145  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y ASN B  146  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y LEU B  147  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y TYR B  148  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y PHE B  149  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y GLN B  150  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y SER B  151  UNP  Q9UJV9              EXPRESSION TAG                 
SEQADV 5H1Y ASN B  152  UNP  Q9UJV9              EXPRESSION TAG                 
SEQRES   1 A  281  MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU          
SEQRES   2 A  281  GLY THR GLU ASN LEU TYR PHE GLN SER ASN LEU SER MET          
SEQRES   3 A  281  SER GLU GLU ARG HIS GLU ARG VAL ARG LYS LYS TYR HIS          
SEQRES   4 A  281  ILE LEU VAL GLU GLY ASP GLY ILE PRO PRO PRO ILE LYS          
SEQRES   5 A  281  SER PHE LYS GLU MET LYS PHE PRO ALA ALA ILE LEU ARG          
SEQRES   6 A  281  GLY LEU LYS LYS LYS GLY ILE HIS HIS PRO THR PRO ILE          
SEQRES   7 A  281  GLN ILE GLN GLY ILE PRO THR ILE LEU SER GLY ARG ASP          
SEQRES   8 A  281  MET ILE GLY ILE ALA PHE THR GLY SER GLY LYS THR LEU          
SEQRES   9 A  281  VAL PHE THR LEU PRO VAL ILE MET PHE CYS LEU GLU GLN          
SEQRES  10 A  281  GLU LYS ARG LEU PRO PHE SER LYS ARG GLU GLY PRO TYR          
SEQRES  11 A  281  GLY LEU ILE ILE CYS PRO SER ARG GLU LEU ALA ARG GLN          
SEQRES  12 A  281  THR HIS GLY ILE LEU GLU TYR TYR CYS ARG LEU LEU GLN          
SEQRES  13 A  281  GLU ASP SER SER PRO LEU LEU ARG CYS ALA LEU CYS ILE          
SEQRES  14 A  281  GLY GLY MET SER VAL LYS GLU GLN MET GLU THR ILE ARG          
SEQRES  15 A  281  HIS GLY VAL HIS MET MET VAL ALA THR PRO GLY ARG LEU          
SEQRES  16 A  281  MET ASP LEU LEU GLN LYS LYS MET VAL SER LEU ASP ILE          
SEQRES  17 A  281  CYS ARG TYR LEU ALA LEU ASP GLU ALA ASP ARG MET ILE          
SEQRES  18 A  281  ASP MET GLY PHE GLU GLY ASP ILE ARG THR ILE PHE SER          
SEQRES  19 A  281  TYR PHE LYS GLY GLN ARG GLN THR LEU LEU PHE SER ALA          
SEQRES  20 A  281  THR MET PRO LYS LYS ILE GLN ASN PHE ALA LYS SER ALA          
SEQRES  21 A  281  LEU VAL LYS PRO VAL THR ILE ASN VAL GLY ARG ALA GLY          
SEQRES  22 A  281  ALA ALA SER LEU ASP VAL ILE GLN                              
SEQRES   1 B  281  MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU          
SEQRES   2 B  281  GLY THR GLU ASN LEU TYR PHE GLN SER ASN LEU SER MET          
SEQRES   3 B  281  SER GLU GLU ARG HIS GLU ARG VAL ARG LYS LYS TYR HIS          
SEQRES   4 B  281  ILE LEU VAL GLU GLY ASP GLY ILE PRO PRO PRO ILE LYS          
SEQRES   5 B  281  SER PHE LYS GLU MET LYS PHE PRO ALA ALA ILE LEU ARG          
SEQRES   6 B  281  GLY LEU LYS LYS LYS GLY ILE HIS HIS PRO THR PRO ILE          
SEQRES   7 B  281  GLN ILE GLN GLY ILE PRO THR ILE LEU SER GLY ARG ASP          
SEQRES   8 B  281  MET ILE GLY ILE ALA PHE THR GLY SER GLY LYS THR LEU          
SEQRES   9 B  281  VAL PHE THR LEU PRO VAL ILE MET PHE CYS LEU GLU GLN          
SEQRES  10 B  281  GLU LYS ARG LEU PRO PHE SER LYS ARG GLU GLY PRO TYR          
SEQRES  11 B  281  GLY LEU ILE ILE CYS PRO SER ARG GLU LEU ALA ARG GLN          
SEQRES  12 B  281  THR HIS GLY ILE LEU GLU TYR TYR CYS ARG LEU LEU GLN          
SEQRES  13 B  281  GLU ASP SER SER PRO LEU LEU ARG CYS ALA LEU CYS ILE          
SEQRES  14 B  281  GLY GLY MET SER VAL LYS GLU GLN MET GLU THR ILE ARG          
SEQRES  15 B  281  HIS GLY VAL HIS MET MET VAL ALA THR PRO GLY ARG LEU          
SEQRES  16 B  281  MET ASP LEU LEU GLN LYS LYS MET VAL SER LEU ASP ILE          
SEQRES  17 B  281  CYS ARG TYR LEU ALA LEU ASP GLU ALA ASP ARG MET ILE          
SEQRES  18 B  281  ASP MET GLY PHE GLU GLY ASP ILE ARG THR ILE PHE SER          
SEQRES  19 B  281  TYR PHE LYS GLY GLN ARG GLN THR LEU LEU PHE SER ALA          
SEQRES  20 B  281  THR MET PRO LYS LYS ILE GLN ASN PHE ALA LYS SER ALA          
SEQRES  21 B  281  LEU VAL LYS PRO VAL THR ILE ASN VAL GLY ARG ALA GLY          
SEQRES  22 B  281  ALA ALA SER LEU ASP VAL ILE GLN                              
HET    SO4  A 501       5                                                       
HET     MG  A 502       1                                                       
HET    SO4  B 501       5                                                       
HET     MG  B 502       1                                                       
HETNAM     SO4 SULFATE ION                                                      
HETNAM      MG MAGNESIUM ION                                                    
FORMUL   3  SO4    2(O4 S 2-)                                                   
FORMUL   4   MG    2(MG 2+)                                                     
FORMUL   7  HOH   *158(H2 O)                                                    
HELIX    1 AA1 GLU A  158  TYR A  167  1                                  10    
HELIX    2 AA2 PRO A  189  LYS A  198  1                                  10    
HELIX    3 AA3 THR A  205  SER A  217  1                                  13    
HELIX    4 AA4 GLY A  230  LEU A  250  1                                  21    
HELIX    5 AA5 SER A  266  GLU A  286  1                                  21    
HELIX    6 AA6 SER A  302  ARG A  311  1                                  10    
HELIX    7 AA7 THR A  320  LYS A  330  1                                  11    
HELIX    8 AA8 GLU A  345  MET A  352  1                                   8    
HELIX    9 AA9 PHE A  354  SER A  363  1                                  10    
HELIX   10 AB1 PRO A  379  LEU A  390  1                                  12    
HELIX   11 AB2 MET B  155  TYR B  167  1                                  13    
HELIX   12 AB3 PRO B  189  LYS B  198  1                                  10    
HELIX   13 AB4 THR B  205  SER B  217  1                                  13    
HELIX   14 AB5 GLY B  230  LEU B  250  1                                  21    
HELIX   15 AB6 SER B  266  GLU B  286  1                                  21    
HELIX   16 AB7 SER B  302  HIS B  312  1                                  11    
HELIX   17 AB8 THR B  320  LYS B  330  1                                  11    
HELIX   18 AB9 GLU B  345  MET B  352  1                                   8    
HELIX   19 AC1 PHE B  354  SER B  363  1                                  10    
HELIX   20 AC2 PRO B  379  LEU B  390  1                                  12    
SHEET    1 AA1 8 LEU A 170  GLU A 172  0                                        
SHEET    2 AA1 8 VAL A 394  ASN A 397 -1  O  ASN A 397   N  LEU A 170           
SHEET    3 AA1 8 MET A 221  ILE A 224  1  N  ILE A 222   O  ILE A 396           
SHEET    4 AA1 8 GLN A 370  SER A 375  1  O  LEU A 373   N  GLY A 223           
SHEET    5 AA1 8 TYR A 340  LEU A 343  1  N  LEU A 343   O  PHE A 374           
SHEET    6 AA1 8 GLY A 260  ILE A 263  1  N  LEU A 261   O  ALA A 342           
SHEET    7 AA1 8 MET A 316  ALA A 319  1  O  ALA A 319   N  ILE A 262           
SHEET    8 AA1 8 CYS A 294  CYS A 297  1  N  CYS A 297   O  VAL A 318           
SHEET    1 AA2 8 LEU B 170  GLU B 172  0                                        
SHEET    2 AA2 8 VAL B 394  ASN B 397 -1  O  ASN B 397   N  LEU B 170           
SHEET    3 AA2 8 MET B 221  ILE B 224  1  N  ILE B 224   O  ILE B 396           
SHEET    4 AA2 8 GLN B 370  PHE B 374  1  O  LEU B 373   N  GLY B 223           
SHEET    5 AA2 8 TYR B 340  LEU B 343  1  N  LEU B 343   O  LEU B 372           
SHEET    6 AA2 8 GLY B 260  ILE B 263  1  N  LEU B 261   O  TYR B 340           
SHEET    7 AA2 8 MET B 316  ALA B 319  1  O  MET B 317   N  ILE B 262           
SHEET    8 AA2 8 CYS B 294  CYS B 297  1  N  ALA B 295   O  VAL B 318           
LINK         OG1 THR A 227                MG    MG A 502     1555   1555  2.56  
LINK         OE2 GLU A 345                MG    MG A 502     1555   1555  2.44  
LINK        MG    MG A 502                 O   HOH A 624     1555   1555  2.82  
LINK         OG1 THR B 227                MG    MG B 502     1555   1555  2.71  
LINK         OE2 GLU B 345                MG    MG B 502     1555   1555  2.55  
LINK        MG    MG B 502                 O   HOH B 661     1555   1555  2.83  
SITE     1 AC1  6 GLY A 228  SER A 229  GLY A 230  LYS A 231                    
SITE     2 AC1  6 THR A 232  HOH A 624                                          
SITE     1 AC2  4 THR A 227  LYS A 231  GLU A 345  HOH A 624                    
SITE     1 AC3  6 GLY B 228  SER B 229  GLY B 230  LYS B 231                    
SITE     2 AC3  6 THR B 232  HOH B 661                                          
SITE     1 AC4  4 THR B 227  LYS B 231  GLU B 345  HOH B 661                    
CRYST1   43.881   62.746   92.881  90.00  94.32  90.00 P 1 21 1      4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.022789  0.000000  0.001722        0.00000                         
SCALE2      0.000000  0.015937  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.010797        0.00000