PDB Short entry for 5L81 HEADER SIGNALING PROTEIN 06-JUN-16 5L81 TITLE CRYSTAL STRUCTURE OF THE PH DOMAIN OF MURINE KINDLIN-3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERMITIN FAMILY HOMOLOG 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: KINDLIN-3,UNC-112-RELATED PROTEIN 2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: FERMT3, KIND3, URP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: B834 KEYWDS PLECKSTRIN HOMOLOGY DOMAIN, MEMBRANE BINDING, INTEGRIN ACTIVATION, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.NI,K.HARLOS,R.J.C.GILBERT REVDAT 4 16-OCT-19 5L81 1 REMARK REVDAT 3 13-SEP-17 5L81 1 REMARK REVDAT 2 15-FEB-17 5L81 1 JRNL REVDAT 1 11-JAN-17 5L81 0 JRNL AUTH T.NI,A.C.KALLI,F.B.NAUGHTON,L.A.YATES,O.NANEH,M.KOZOROG, JRNL AUTH 2 G.ANDERLUH,M.S.SANSOM,R.J.GILBERT JRNL TITL STRUCTURE AND LIPID-BINDING PROPERTIES OF THE KINDLIN-3 JRNL TITL 2 PLECKSTRIN HOMOLOGY DOMAIN. JRNL REF BIOCHEM. J. V. 474 539 2017 JRNL REFN ESSN 1470-8728 JRNL PMID 27974389 JRNL DOI 10.1042/BCJ20160791 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 12441 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.7380 - 3.5387 0.96 3077 158 0.1838 0.2335 REMARK 3 2 3.5387 - 2.8093 0.98 2988 160 0.2621 0.3265 REMARK 3 3 2.8093 - 2.4543 0.97 2954 146 0.2857 0.3401 REMARK 3 4 2.4543 - 2.2300 0.94 2805 153 0.3038 0.3574 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2165 REMARK 3 ANGLE : 1.105 2925 REMARK 3 CHIRALITY : 0.062 323 REMARK 3 PLANARITY : 0.008 373 REMARK 3 DIHEDRAL : 12.219 1834 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 345 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 142.3992 -37.2938 -75.7365 REMARK 3 T TENSOR REMARK 3 T11: 1.0565 T22: 0.9053 REMARK 3 T33: 1.0844 T12: -0.2093 REMARK 3 T13: 0.1502 T23: -0.0607 REMARK 3 L TENSOR REMARK 3 L11: 2.8717 L22: 8.3251 REMARK 3 L33: 5.1034 L12: 0.4578 REMARK 3 L13: 0.1292 L23: 4.8063 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: 0.2153 S13: 0.2560 REMARK 3 S21: -0.5550 S22: -0.9118 S23: 0.4092 REMARK 3 S31: 2.1446 S32: 0.4916 S33: 0.0483 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 351 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): 145.5556 -19.7874 -61.9123 REMARK 3 T TENSOR REMARK 3 T11: 0.7388 T22: 0.6153 REMARK 3 T33: 0.5872 T12: -0.3128 REMARK 3 T13: 0.0860 T23: 0.0544 REMARK 3 L TENSOR REMARK 3 L11: 8.2884 L22: 5.4838 REMARK 3 L33: 8.9260 L12: 1.4277 REMARK 3 L13: 5.1683 L23: 3.1415 REMARK 3 S TENSOR REMARK 3 S11: -1.6156 S12: 1.7744 S13: 0.4072 REMARK 3 S21: -1.2684 S22: 0.8572 S23: 1.1884 REMARK 3 S31: -0.6440 S32: -1.2101 S33: 0.2277 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 360 THROUGH 369 ) REMARK 3 ORIGIN FOR THE GROUP (A): 158.6657 -13.0238 -54.9763 REMARK 3 T TENSOR REMARK 3 T11: 0.8835 T22: 0.5188 REMARK 3 T33: 0.8010 T12: 0.0383 REMARK 3 T13: 0.1065 T23: -0.0473 REMARK 3 L TENSOR REMARK 3 L11: 3.1020 L22: 8.2681 REMARK 3 L33: 8.7051 L12: 3.5412 REMARK 3 L13: -0.8497 L23: 4.7739 REMARK 3 S TENSOR REMARK 3 S11: -0.1162 S12: -0.9019 S13: 0.0806 REMARK 3 S21: 0.5117 S22: -0.0604 S23: -1.4443 REMARK 3 S31: -1.0995 S32: 0.4059 S33: -0.1717 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 370 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 149.7573 -21.8338 -64.9084 REMARK 3 T TENSOR REMARK 3 T11: 0.6634 T22: 0.7616 REMARK 3 T33: 0.5965 T12: -0.1940 REMARK 3 T13: 0.0310 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 4.6262 L22: 9.0235 REMARK 3 L33: 7.4785 L12: 0.8571 REMARK 3 L13: 0.2358 L23: 2.3833 REMARK 3 S TENSOR REMARK 3 S11: -0.8103 S12: 1.6158 S13: -0.0177 REMARK 3 S21: -1.3848 S22: 0.3313 S23: -0.3942 REMARK 3 S31: 0.2689 S32: -0.5784 S33: 0.0605 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 385 THROUGH 403 ) REMARK 3 ORIGIN FOR THE GROUP (A): 153.6652 -21.6173 -67.4509 REMARK 3 T TENSOR REMARK 3 T11: 1.0211 T22: 1.1095 REMARK 3 T33: 0.6485 T12: -0.4422 REMARK 3 T13: 0.1805 T23: 0.1614 REMARK 3 L TENSOR REMARK 3 L11: 6.8264 L22: 7.8528 REMARK 3 L33: 6.8357 L12: 1.4577 REMARK 3 L13: -0.0234 L23: -1.0661 REMARK 3 S TENSOR REMARK 3 S11: -0.6429 S12: 2.2758 S13: 0.1723 REMARK 3 S21: -2.0065 S22: 1.6018 S23: 0.5206 REMARK 3 S31: 0.4934 S32: -0.3252 S33: 0.3360 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 404 THROUGH 424 ) REMARK 3 ORIGIN FOR THE GROUP (A): 148.4432 -23.8928 -49.4895 REMARK 3 T TENSOR REMARK 3 T11: 0.5762 T22: 0.3804 REMARK 3 T33: 0.7995 T12: -0.0348 REMARK 3 T13: 0.2084 T23: -0.0786 REMARK 3 L TENSOR REMARK 3 L11: 3.5722 L22: 2.2215 REMARK 3 L33: 7.5161 L12: -0.4145 REMARK 3 L13: -1.7005 L23: 0.0271 REMARK 3 S TENSOR REMARK 3 S11: -0.4248 S12: -1.1855 S13: 0.5895 REMARK 3 S21: 0.3141 S22: 0.4368 S23: -0.0459 REMARK 3 S31: 0.1740 S32: 0.1335 S33: 0.0710 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 425 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): 153.9410 -21.5899 -54.6384 REMARK 3 T TENSOR REMARK 3 T11: 0.7333 T22: 0.2890 REMARK 3 T33: 0.9263 T12: -0.0537 REMARK 3 T13: 0.0963 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 2.1396 L22: 9.4198 REMARK 3 L33: 5.7192 L12: -0.9259 REMARK 3 L13: -0.2514 L23: -0.0398 REMARK 3 S TENSOR REMARK 3 S11: 0.1568 S12: -0.0418 S13: -0.6178 REMARK 3 S21: 0.6464 S22: -0.0635 S23: 0.2052 REMARK 3 S31: 0.3419 S32: 0.0113 S33: 0.1718 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 438 THROUGH 461 ) REMARK 3 ORIGIN FOR THE GROUP (A): 144.3221 -32.6040 -57.9683 REMARK 3 T TENSOR REMARK 3 T11: 0.7230 T22: 0.5117 REMARK 3 T33: 0.7736 T12: -0.2262 REMARK 3 T13: 0.2358 T23: -0.0572 REMARK 3 L TENSOR REMARK 3 L11: 8.2383 L22: 3.0346 REMARK 3 L33: 5.3397 L12: 3.0108 REMARK 3 L13: 0.8408 L23: -0.9136 REMARK 3 S TENSOR REMARK 3 S11: -0.5531 S12: 0.6089 S13: -0.8865 REMARK 3 S21: -0.2043 S22: 0.5393 S23: 0.5767 REMARK 3 S31: 1.0927 S32: -0.3169 S33: 0.0026 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 462 THROUGH 477 ) REMARK 3 ORIGIN FOR THE GROUP (A): 136.4280 -31.6756 -50.5162 REMARK 3 T TENSOR REMARK 3 T11: 0.5595 T22: 0.6136 REMARK 3 T33: 0.7858 T12: -0.1462 REMARK 3 T13: 0.3592 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 5.9500 L22: 7.7553 REMARK 3 L33: 4.2165 L12: 1.2552 REMARK 3 L13: -0.5330 L23: 0.4507 REMARK 3 S TENSOR REMARK 3 S11: -0.1647 S12: 0.6452 S13: 0.9485 REMARK 3 S21: -0.2729 S22: 1.2004 S23: 0.9854 REMARK 3 S31: -0.0626 S32: -0.1920 S33: 0.4867 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 345 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): 149.3283 -37.8039 -28.4951 REMARK 3 T TENSOR REMARK 3 T11: 0.8057 T22: 1.0743 REMARK 3 T33: 0.6343 T12: 0.0940 REMARK 3 T13: 0.0404 T23: 0.1288 REMARK 3 L TENSOR REMARK 3 L11: 8.5898 L22: 8.7557 REMARK 3 L33: 6.8856 L12: -4.9739 REMARK 3 L13: -6.0363 L23: 5.6550 REMARK 3 S TENSOR REMARK 3 S11: -0.2329 S12: -0.7210 S13: -0.1227 REMARK 3 S21: 1.3558 S22: -0.5711 S23: -0.8345 REMARK 3 S31: 1.2322 S32: -0.1270 S33: 0.2730 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 361 THROUGH 369 ) REMARK 3 ORIGIN FOR THE GROUP (A): 165.5305 -44.5273 -40.2414 REMARK 3 T TENSOR REMARK 3 T11: 0.2939 T22: 0.5748 REMARK 3 T33: 0.8203 T12: 0.9912 REMARK 3 T13: 1.0114 T23: -0.2156 REMARK 3 L TENSOR REMARK 3 L11: 3.4227 L22: 1.2718 REMARK 3 L33: 2.4427 L12: -1.9789 REMARK 3 L13: -0.6323 L23: -0.1641 REMARK 3 S TENSOR REMARK 3 S11: 0.0475 S12: 0.1783 S13: -0.7045 REMARK 3 S21: 0.9754 S22: 0.9910 S23: 0.8404 REMARK 3 S31: -0.6850 S32: -0.7521 S33: 2.8250 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 370 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 155.0616 -37.9835 -29.3569 REMARK 3 T TENSOR REMARK 3 T11: 1.0215 T22: 0.9872 REMARK 3 T33: 0.7061 T12: 0.0117 REMARK 3 T13: 0.0863 T23: 0.2509 REMARK 3 L TENSOR REMARK 3 L11: 4.7241 L22: 1.7752 REMARK 3 L33: 8.6519 L12: 1.6315 REMARK 3 L13: 2.3240 L23: 0.9033 REMARK 3 S TENSOR REMARK 3 S11: 0.2924 S12: -1.8247 S13: -1.2908 REMARK 3 S21: 1.7546 S22: -0.7978 S23: 0.1999 REMARK 3 S31: 1.0853 S32: -0.6498 S33: 0.3765 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 385 THROUGH 395 ) REMARK 3 ORIGIN FOR THE GROUP (A): 159.6954 -42.2696 -22.6302 REMARK 3 T TENSOR REMARK 3 T11: 1.2492 T22: 1.7212 REMARK 3 T33: 1.2233 T12: 0.0215 REMARK 3 T13: -0.1827 T23: 0.4065 REMARK 3 L TENSOR REMARK 3 L11: 3.8544 L22: 7.2438 REMARK 3 L33: 2.5297 L12: 1.5860 REMARK 3 L13: 2.2408 L23: 3.7749 REMARK 3 S TENSOR REMARK 3 S11: 1.1203 S12: -3.4888 S13: -1.6410 REMARK 3 S21: 2.9432 S22: -0.5692 S23: -2.1696 REMARK 3 S31: 0.2327 S32: -1.2122 S33: -0.0893 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 396 THROUGH 422 ) REMARK 3 ORIGIN FOR THE GROUP (A): 152.9345 -35.2222 -41.6580 REMARK 3 T TENSOR REMARK 3 T11: 0.6388 T22: 0.5096 REMARK 3 T33: 0.5623 T12: 0.0895 REMARK 3 T13: 0.1443 T23: 0.1185 REMARK 3 L TENSOR REMARK 3 L11: 9.0815 L22: 4.8687 REMARK 3 L33: 8.7116 L12: 1.7644 REMARK 3 L13: -0.1152 L23: 2.5749 REMARK 3 S TENSOR REMARK 3 S11: -0.1374 S12: -0.4410 S13: -0.7350 REMARK 3 S21: -1.0509 S22: -0.5557 S23: -0.8774 REMARK 3 S31: 0.1436 S32: 0.2904 S33: 0.2344 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 423 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): 164.2168 -26.3023 -41.5856 REMARK 3 T TENSOR REMARK 3 T11: 1.0013 T22: 1.0342 REMARK 3 T33: 1.4779 T12: 0.3211 REMARK 3 T13: -0.3607 T23: 0.3383 REMARK 3 L TENSOR REMARK 3 L11: 3.5321 L22: 9.3289 REMARK 3 L33: 3.2936 L12: -0.7932 REMARK 3 L13: -1.8257 L23: 3.4044 REMARK 3 S TENSOR REMARK 3 S11: 0.2276 S12: 1.0855 S13: -0.6247 REMARK 3 S21: 0.1800 S22: 0.0666 S23: -2.4719 REMARK 3 S31: 1.0832 S32: 2.0819 S33: 0.4463 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 429 THROUGH 453 ) REMARK 3 ORIGIN FOR THE GROUP (A): 148.8599 -36.6950 -38.6370 REMARK 3 T TENSOR REMARK 3 T11: 0.7967 T22: 0.4945 REMARK 3 T33: 0.5529 T12: 0.1044 REMARK 3 T13: 0.1925 T23: 0.0616 REMARK 3 L TENSOR REMARK 3 L11: 8.1051 L22: 6.6470 REMARK 3 L33: 6.4178 L12: 0.4972 REMARK 3 L13: 2.1662 L23: 0.1549 REMARK 3 S TENSOR REMARK 3 S11: -0.0397 S12: 0.0881 S13: -0.5125 REMARK 3 S21: 0.8637 S22: 0.0456 S23: 0.4981 REMARK 3 S31: 0.9056 S32: -0.0805 S33: 0.4476 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 454 THROUGH 478 ) REMARK 3 ORIGIN FOR THE GROUP (A): 139.1071 -33.6059 -39.7502 REMARK 3 T TENSOR REMARK 3 T11: 0.6563 T22: 0.7982 REMARK 3 T33: 0.3766 T12: -0.0725 REMARK 3 T13: 0.6172 T23: -0.2027 REMARK 3 L TENSOR REMARK 3 L11: 3.4807 L22: 4.8939 REMARK 3 L33: 5.8384 L12: -0.0209 REMARK 3 L13: 0.4927 L23: -1.1205 REMARK 3 S TENSOR REMARK 3 S11: 0.3713 S12: -0.8499 S13: 0.3550 REMARK 3 S21: -0.1206 S22: -0.1324 S23: 0.6974 REMARK 3 S31: 0.7828 S32: 0.0525 S33: 1.2453 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5L81 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1200000292. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96861 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12441 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 31.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.12100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4BBK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4M SODIUM NITRATE, 0.1M SODIUM REMARK 280 ACETATE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 66.02000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.09500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 66.02000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 18.09500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 330 REMARK 465 ASP A 331 REMARK 465 LEU A 332 REMARK 465 SER A 333 REMARK 465 SER A 334 REMARK 465 GLY A 335 REMARK 465 LEU A 336 REMARK 465 GLU A 337 REMARK 465 VAL A 338 REMARK 465 LEU A 339 REMARK 465 PHE A 340 REMARK 465 GLN A 341 REMARK 465 GLY A 342 REMARK 465 THR A 343 REMARK 465 ASP A 344 REMARK 465 ALA A 478 REMARK 465 GLY A 479 REMARK 465 SER B 330 REMARK 465 ASP B 331 REMARK 465 LEU B 332 REMARK 465 SER B 333 REMARK 465 SER B 334 REMARK 465 GLY B 335 REMARK 465 LEU B 336 REMARK 465 GLU B 337 REMARK 465 VAL B 338 REMARK 465 LEU B 339 REMARK 465 PHE B 340 REMARK 465 GLN B 341 REMARK 465 GLY B 342 REMARK 465 THR B 343 REMARK 465 SER B 424 REMARK 465 PRO B 425 REMARK 465 GLU B 426 REMARK 465 GLY B 479 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 467 O HOH A 501 1.86 REMARK 500 OG1 THR A 365 O HOH A 502 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 367 116.63 -173.56 REMARK 500 ASP A 378 -117.01 53.62 REMARK 500 ASP B 378 -116.05 56.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 345 LEU B 346 -106.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 NA B 501 DBREF 5L81 A 344 478 UNP Q8K1B8 URP2_MOUSE 344 478 DBREF 5L81 B 344 478 UNP Q8K1B8 URP2_MOUSE 344 478 SEQADV 5L81 SER A 330 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 ASP A 331 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 LEU A 332 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 SER A 333 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 SER A 334 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLY A 335 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 LEU A 336 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLU A 337 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 VAL A 338 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 LEU A 339 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 PHE A 340 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLN A 341 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLY A 342 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 THR A 343 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLY A 479 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 SER B 330 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 ASP B 331 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 LEU B 332 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 SER B 333 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 SER B 334 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLY B 335 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 LEU B 336 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLU B 337 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 VAL B 338 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 LEU B 339 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 PHE B 340 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLN B 341 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLY B 342 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 THR B 343 UNP Q8K1B8 EXPRESSION TAG SEQADV 5L81 GLY B 479 UNP Q8K1B8 EXPRESSION TAG SEQRES 1 A 150 SER ASP LEU SER SER GLY LEU GLU VAL LEU PHE GLN GLY SEQRES 2 A 150 THR ASP SER LEU THR THR ILE PRO GLU LEU LYS ASP HIS SEQRES 3 A 150 LEU ARG ILE PHE ARG PRO ARG LYS LEU THR LEU LYS GLY SEQRES 4 A 150 TYR ARG GLN TYR TRP VAL VAL PHE LYS ASP THR THR LEU SEQRES 5 A 150 SER TYR TYR LYS SER GLN ASP GLU ALA PRO GLY ASP PRO SEQRES 6 A 150 THR GLN GLN LEU ASN LEU LYS GLY CYS GLU VAL VAL PRO SEQRES 7 A 150 ASP VAL ASN VAL SER GLY GLN LYS PHE CYS ILE LYS LEU SEQRES 8 A 150 LEU VAL PRO SER PRO GLU GLY MET SER GLU ILE TYR LEU SEQRES 9 A 150 ARG CYS GLN ASP GLU GLN GLN TYR ALA GLN TRP MET ALA SEQRES 10 A 150 ALA CYS ARG LEU ALA SER LYS GLY ARG THR MET ALA ASP SEQRES 11 A 150 SER SER TYR ALA SER GLU VAL GLN ALA ILE LEU ALA PHE SEQRES 12 A 150 LEU SER LEU GLN ARG ALA GLY SEQRES 1 B 150 SER ASP LEU SER SER GLY LEU GLU VAL LEU PHE GLN GLY SEQRES 2 B 150 THR ASP SER LEU THR THR ILE PRO GLU LEU LYS ASP HIS SEQRES 3 B 150 LEU ARG ILE PHE ARG PRO ARG LYS LEU THR LEU LYS GLY SEQRES 4 B 150 TYR ARG GLN TYR TRP VAL VAL PHE LYS ASP THR THR LEU SEQRES 5 B 150 SER TYR TYR LYS SER GLN ASP GLU ALA PRO GLY ASP PRO SEQRES 6 B 150 THR GLN GLN LEU ASN LEU LYS GLY CYS GLU VAL VAL PRO SEQRES 7 B 150 ASP VAL ASN VAL SER GLY GLN LYS PHE CYS ILE LYS LEU SEQRES 8 B 150 LEU VAL PRO SER PRO GLU GLY MET SER GLU ILE TYR LEU SEQRES 9 B 150 ARG CYS GLN ASP GLU GLN GLN TYR ALA GLN TRP MET ALA SEQRES 10 B 150 ALA CYS ARG LEU ALA SER LYS GLY ARG THR MET ALA ASP SEQRES 11 B 150 SER SER TYR ALA SER GLU VAL GLN ALA ILE LEU ALA PHE SEQRES 12 B 150 LEU SER LEU GLN ARG ALA GLY HET NA B 501 1 HETNAM NA SODIUM ION FORMUL 3 NA NA 1+ FORMUL 4 HOH *13(H2 O) HELIX 1 AA1 ASP A 437 LYS A 453 1 17 HELIX 2 AA2 SER A 461 ARG A 477 1 17 HELIX 3 AA3 LYS B 401 CYS B 403 5 3 HELIX 4 AA4 ASP B 437 LYS B 453 1 17 HELIX 5 AA5 SER B 461 ALA B 478 1 18 SHEET 1 AA1 7 GLN A 396 ASN A 399 0 SHEET 2 AA1 7 THR A 380 TYR A 384 -1 N TYR A 383 O GLN A 396 SHEET 3 AA1 7 ARG A 370 LYS A 377 -1 N VAL A 375 O SER A 382 SHEET 4 AA1 7 GLU A 351 PHE A 359 -1 N ASP A 354 O VAL A 374 SHEET 5 AA1 7 GLY A 427 ARG A 434 -1 O ARG A 434 N ARG A 357 SHEET 6 AA1 7 LYS A 415 SER A 424 -1 N ILE A 418 O LEU A 433 SHEET 7 AA1 7 GLU A 404 ASN A 410 -1 N VAL A 406 O LYS A 419 SHEET 1 AA2 7 GLN B 396 ASN B 399 0 SHEET 2 AA2 7 THR B 380 TYR B 384 -1 N TYR B 383 O GLN B 396 SHEET 3 AA2 7 ARG B 370 LYS B 377 -1 N VAL B 375 O SER B 382 SHEET 4 AA2 7 LEU B 352 PHE B 359 -1 N ASP B 354 O VAL B 374 SHEET 5 AA2 7 SER B 429 ARG B 434 -1 O ARG B 434 N ARG B 357 SHEET 6 AA2 7 LYS B 415 VAL B 422 -1 N ILE B 418 O LEU B 433 SHEET 7 AA2 7 GLU B 404 ASN B 410 -1 N VAL B 406 O LYS B 419 LINK O GLU B 430 NA NA B 501 1555 1555 3.05 CISPEP 1 ALA A 390 PRO A 391 0 -5.34 CISPEP 2 ALA B 390 PRO B 391 0 -3.06 CISPEP 3 GLY B 392 ASP B 393 0 -4.59 CRYST1 132.040 36.190 52.690 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007573 0.000000 0.000000 0.00000 SCALE2 0.000000 0.027632 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018979 0.00000