PDB Short entry for 5LG1 HEADER IMMUNE SYSTEM 05-JUL-16 5LG1 TITLE ROOM TEMPERATURE STRUCTURE OF HUMAN IGG4-FC FROM CRYSTALS ANALYSED IN TITLE 2 SITU COMPND MOL_ID: 1; COMPND 2 MOLECULE: IG GAMMA-4 CHAIN C REGION; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: HUMAN IGG 4 FC REGION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IGHG4; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS ANTIBODY IMMUNOGLOBULIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.M.DAVIES,T.RISPENS,P.OOIJEVAAR-DE HEER,R.C.AALBERSE,B.J.SUTTON REVDAT 5 10-JAN-24 5LG1 1 HETSYN LINK REVDAT 4 29-JUL-20 5LG1 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 30-AUG-17 5LG1 1 REMARK REVDAT 2 28-DEC-16 5LG1 1 JRNL REVDAT 1 14-DEC-16 5LG1 0 JRNL AUTH A.M.DAVIES,T.RISPENS,P.OOIJEVAAR-DE HEER,R.C.AALBERSE, JRNL AUTH 2 B.J.SUTTON JRNL TITL ROOM TEMPERATURE STRUCTURE OF HUMAN IGG4-FC FROM CRYSTALS JRNL TITL 2 ANALYSED IN SITU. JRNL REF MOL. IMMUNOL. V. 81 85 2016 JRNL REFN ISSN 1872-9142 JRNL PMID 27915153 JRNL DOI 10.1016/J.MOLIMM.2016.11.021 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 17653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3571 - 4.9052 0.99 2944 140 0.1376 0.2075 REMARK 3 2 4.9052 - 3.8940 1.00 2804 158 0.1386 0.1820 REMARK 3 3 3.8940 - 3.4019 1.00 2775 159 0.1880 0.2446 REMARK 3 4 3.4019 - 3.0909 1.00 2781 126 0.2283 0.2905 REMARK 3 5 3.0909 - 2.8694 0.99 2753 144 0.2896 0.3051 REMARK 3 6 2.8694 - 2.7002 0.99 2710 159 0.3355 0.3933 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3578 REMARK 3 ANGLE : 0.540 4915 REMARK 3 CHIRALITY : 0.040 590 REMARK 3 PLANARITY : 0.003 607 REMARK 3 DIHEDRAL : 10.648 2161 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 325 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6721 66.0523 -3.0347 REMARK 3 T TENSOR REMARK 3 T11: 0.5463 T22: 0.6601 REMARK 3 T33: 0.5111 T12: -0.0467 REMARK 3 T13: 0.1151 T23: 0.0513 REMARK 3 L TENSOR REMARK 3 L11: 1.3404 L22: 2.2226 REMARK 3 L33: 0.6576 L12: 0.4047 REMARK 3 L13: 0.6064 L23: 0.1593 REMARK 3 S TENSOR REMARK 3 S11: -0.0805 S12: 0.3206 S13: 0.0353 REMARK 3 S21: -0.2747 S22: 0.0553 S23: -0.0815 REMARK 3 S31: -0.0394 S32: 0.2410 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 326 THROUGH 383 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.5424 75.7809 20.2219 REMARK 3 T TENSOR REMARK 3 T11: 0.5330 T22: 0.4884 REMARK 3 T33: 0.4983 T12: -0.0277 REMARK 3 T13: 0.0041 T23: 0.0889 REMARK 3 L TENSOR REMARK 3 L11: 0.9878 L22: 2.0843 REMARK 3 L33: 0.3680 L12: 0.1899 REMARK 3 L13: -0.2510 L23: 0.6950 REMARK 3 S TENSOR REMARK 3 S11: -0.1149 S12: -0.0068 S13: 0.2110 REMARK 3 S21: 0.2443 S22: 0.0669 S23: -0.3508 REMARK 3 S31: 0.0154 S32: 0.0521 S33: 0.0078 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 384 THROUGH 444 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.7870 71.9120 28.5330 REMARK 3 T TENSOR REMARK 3 T11: 0.6647 T22: 0.5096 REMARK 3 T33: 0.4798 T12: -0.0446 REMARK 3 T13: -0.0761 T23: 0.0626 REMARK 3 L TENSOR REMARK 3 L11: 0.9992 L22: 1.5260 REMARK 3 L33: 1.2958 L12: -1.0908 REMARK 3 L13: -0.3247 L23: 0.9797 REMARK 3 S TENSOR REMARK 3 S11: -0.2186 S12: -0.0644 S13: -0.2365 REMARK 3 S21: 0.4107 S22: 0.0044 S23: -0.3330 REMARK 3 S31: 0.2756 S32: 0.0986 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 237 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3073 96.3224 12.7079 REMARK 3 T TENSOR REMARK 3 T11: 0.8741 T22: 0.9419 REMARK 3 T33: 0.8410 T12: -0.1846 REMARK 3 T13: -0.2982 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 0.1752 L22: 0.7952 REMARK 3 L33: 0.1755 L12: -0.0840 REMARK 3 L13: -0.0265 L23: 0.3801 REMARK 3 S TENSOR REMARK 3 S11: -0.4648 S12: 0.4943 S13: 0.5783 REMARK 3 S21: -0.0582 S22: 0.3739 S23: 0.3358 REMARK 3 S31: -0.0732 S32: 0.4701 S33: -0.0189 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 267 THROUGH 279 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5059 98.6153 -2.2426 REMARK 3 T TENSOR REMARK 3 T11: 1.2306 T22: 1.0926 REMARK 3 T33: 1.1524 T12: -0.1589 REMARK 3 T13: -0.5123 T23: 0.2884 REMARK 3 L TENSOR REMARK 3 L11: 0.1033 L22: 0.0333 REMARK 3 L33: 0.0913 L12: -0.0249 REMARK 3 L13: 0.0909 L23: -0.0444 REMARK 3 S TENSOR REMARK 3 S11: -0.2404 S12: 0.1310 S13: 0.4725 REMARK 3 S21: -0.4457 S22: -0.1435 S23: 0.5111 REMARK 3 S31: -0.5305 S32: 0.0671 S33: -0.0028 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 280 THROUGH 299 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4040 100.7390 2.3204 REMARK 3 T TENSOR REMARK 3 T11: 1.3044 T22: 1.3648 REMARK 3 T33: 1.6769 T12: -0.1955 REMARK 3 T13: -0.3576 T23: 0.2663 REMARK 3 L TENSOR REMARK 3 L11: 0.0509 L22: 0.2813 REMARK 3 L33: 0.2307 L12: -0.0991 REMARK 3 L13: 0.0239 L23: 0.0960 REMARK 3 S TENSOR REMARK 3 S11: 0.5165 S12: 0.0426 S13: -0.4388 REMARK 3 S21: -0.2869 S22: -0.3437 S23: 0.0885 REMARK 3 S31: -0.9380 S32: 0.4253 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 300 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9094 93.9927 7.2079 REMARK 3 T TENSOR REMARK 3 T11: 1.0568 T22: 1.0006 REMARK 3 T33: 1.0540 T12: -0.1462 REMARK 3 T13: -0.3402 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 0.2983 L22: 0.3154 REMARK 3 L33: 0.4003 L12: 0.0867 REMARK 3 L13: 0.3510 L23: 0.0954 REMARK 3 S TENSOR REMARK 3 S11: -0.2790 S12: -0.1397 S13: 0.2381 REMARK 3 S21: -0.4974 S22: -0.0499 S23: 0.6870 REMARK 3 S31: -0.1442 S32: 0.1711 S33: -0.0026 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 337 THROUGH 361 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1138 83.9345 32.3540 REMARK 3 T TENSOR REMARK 3 T11: 0.6190 T22: 0.7022 REMARK 3 T33: 0.7144 T12: -0.0407 REMARK 3 T13: -0.1389 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 0.2263 L22: 1.6192 REMARK 3 L33: 0.8547 L12: -0.5368 REMARK 3 L13: -0.0786 L23: 0.6830 REMARK 3 S TENSOR REMARK 3 S11: -0.1677 S12: -0.1229 S13: 0.0453 REMARK 3 S21: 0.2774 S22: 0.1685 S23: 0.0112 REMARK 3 S31: 0.3043 S32: -0.0371 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 362 THROUGH 418 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.4961 88.5677 29.4312 REMARK 3 T TENSOR REMARK 3 T11: 0.6131 T22: 0.5658 REMARK 3 T33: 0.6644 T12: -0.0550 REMARK 3 T13: -0.1338 T23: -0.0521 REMARK 3 L TENSOR REMARK 3 L11: 0.8676 L22: 1.2625 REMARK 3 L33: 0.8218 L12: -0.9765 REMARK 3 L13: -0.3042 L23: -0.0239 REMARK 3 S TENSOR REMARK 3 S11: -0.0684 S12: -0.2115 S13: 0.2873 REMARK 3 S21: 0.1304 S22: -0.0143 S23: -0.1696 REMARK 3 S31: 0.0350 S32: -0.0620 S33: 0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 419 THROUGH 444 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.2833 93.0418 36.7575 REMARK 3 T TENSOR REMARK 3 T11: 0.6625 T22: 0.6804 REMARK 3 T33: 0.5903 T12: -0.0699 REMARK 3 T13: -0.1487 T23: -0.2089 REMARK 3 L TENSOR REMARK 3 L11: 0.2806 L22: 0.7623 REMARK 3 L33: 0.3585 L12: -0.0904 REMARK 3 L13: 0.0674 L23: -0.5146 REMARK 3 S TENSOR REMARK 3 S11: -0.0590 S12: -0.2441 S13: 0.4335 REMARK 3 S21: 0.4877 S22: 0.1855 S23: 0.0619 REMARK 3 S31: -0.1261 S32: 0.0887 S33: 0.1615 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LG1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1200000577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 291 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17764 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.17100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4C54 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 18-20% PEG 20 000, PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.64700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.94150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.96700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.94150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.64700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.96700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 234 REMARK 465 LEU A 235 REMARK 465 LEU A 445 REMARK 465 GLY A 446 REMARK 465 LYS A 447 REMARK 465 PHE B 234 REMARK 465 LEU B 235 REMARK 465 GLY B 236 REMARK 465 LEU B 445 REMARK 465 GLY B 446 REMARK 465 LYS B 447 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 LYS A 288 CD CE NZ REMARK 470 LYS A 326 CG CD CE NZ REMARK 470 PRO A 329 CB CG CD REMARK 470 LYS A 340 CD CE NZ REMARK 470 GLN A 355 OE1 NE2 REMARK 470 LYS A 414 NZ REMARK 470 LYS B 246 NZ REMARK 470 GLN B 268 CG CD OE1 NE2 REMARK 470 GLU B 269 CG CD OE1 OE2 REMARK 470 LYS B 288 CD CE NZ REMARK 470 LYS B 290 CD CE NZ REMARK 470 ARG B 292 CD NE CZ NH1 NH2 REMARK 470 GLN B 295 CG CD OE1 NE2 REMARK 470 GLN B 311 CG CD OE1 NE2 REMARK 470 LYS B 320 NZ REMARK 470 LYS B 322 CE NZ REMARK 470 LYS B 326 CG CD CE NZ REMARK 470 LEU B 328 CG CD1 CD2 REMARK 470 LYS B 340 CD CE NZ REMARK 470 LYS B 360 CE NZ REMARK 470 ASN B 389 CG OD1 ND2 REMARK 470 LYS B 414 NZ REMARK 470 SER B 444 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 285 16.90 -141.73 REMARK 500 ASN A 286 42.42 -98.25 REMARK 500 ARG B 301 95.40 -160.52 REMARK 500 REMARK 500 REMARK: NULL DBREF 5LG1 A 234 447 UNP P01861 IGHG4_HUMAN 114 327 DBREF 5LG1 B 234 447 UNP P01861 IGHG4_HUMAN 114 327 SEQRES 1 A 214 PHE LEU GLY GLY PRO SER VAL PHE LEU PHE PRO PRO LYS SEQRES 2 A 214 PRO LYS ASP THR LEU MET ILE SER ARG THR PRO GLU VAL SEQRES 3 A 214 THR CYS VAL VAL VAL ASP VAL SER GLN GLU ASP PRO GLU SEQRES 4 A 214 VAL GLN PHE ASN TRP TYR VAL ASP GLY VAL GLU VAL HIS SEQRES 5 A 214 ASN ALA LYS THR LYS PRO ARG GLU GLU GLN PHE ASN SER SEQRES 6 A 214 THR TYR ARG VAL VAL SER VAL LEU THR VAL LEU HIS GLN SEQRES 7 A 214 ASP TRP LEU ASN GLY LYS GLU TYR LYS CYS LYS VAL SER SEQRES 8 A 214 ASN LYS GLY LEU PRO SER SER ILE GLU LYS THR ILE SER SEQRES 9 A 214 LYS ALA LYS GLY GLN PRO ARG GLU PRO GLN VAL TYR THR SEQRES 10 A 214 LEU PRO PRO SER GLN GLU GLU MET THR LYS ASN GLN VAL SEQRES 11 A 214 SER LEU THR CYS LEU VAL LYS GLY PHE TYR PRO SER ASP SEQRES 12 A 214 ILE ALA VAL GLU TRP GLU SER ASN GLY GLN PRO GLU ASN SEQRES 13 A 214 ASN TYR LYS THR THR PRO PRO VAL LEU ASP SER ASP GLY SEQRES 14 A 214 SER PHE PHE LEU TYR SER ARG LEU THR VAL ASP LYS SER SEQRES 15 A 214 ARG TRP GLN GLU GLY ASN VAL PHE SER CYS SER VAL MET SEQRES 16 A 214 HIS GLU ALA LEU HIS ASN HIS TYR THR GLN LYS SER LEU SEQRES 17 A 214 SER LEU SER LEU GLY LYS SEQRES 1 B 214 PHE LEU GLY GLY PRO SER VAL PHE LEU PHE PRO PRO LYS SEQRES 2 B 214 PRO LYS ASP THR LEU MET ILE SER ARG THR PRO GLU VAL SEQRES 3 B 214 THR CYS VAL VAL VAL ASP VAL SER GLN GLU ASP PRO GLU SEQRES 4 B 214 VAL GLN PHE ASN TRP TYR VAL ASP GLY VAL GLU VAL HIS SEQRES 5 B 214 ASN ALA LYS THR LYS PRO ARG GLU GLU GLN PHE ASN SER SEQRES 6 B 214 THR TYR ARG VAL VAL SER VAL LEU THR VAL LEU HIS GLN SEQRES 7 B 214 ASP TRP LEU ASN GLY LYS GLU TYR LYS CYS LYS VAL SER SEQRES 8 B 214 ASN LYS GLY LEU PRO SER SER ILE GLU LYS THR ILE SER SEQRES 9 B 214 LYS ALA LYS GLY GLN PRO ARG GLU PRO GLN VAL TYR THR SEQRES 10 B 214 LEU PRO PRO SER GLN GLU GLU MET THR LYS ASN GLN VAL SEQRES 11 B 214 SER LEU THR CYS LEU VAL LYS GLY PHE TYR PRO SER ASP SEQRES 12 B 214 ILE ALA VAL GLU TRP GLU SER ASN GLY GLN PRO GLU ASN SEQRES 13 B 214 ASN TYR LYS THR THR PRO PRO VAL LEU ASP SER ASP GLY SEQRES 14 B 214 SER PHE PHE LEU TYR SER ARG LEU THR VAL ASP LYS SER SEQRES 15 B 214 ARG TRP GLN GLU GLY ASN VAL PHE SER CYS SER VAL MET SEQRES 16 B 214 HIS GLU ALA LEU HIS ASN HIS TYR THR GLN LYS SER LEU SEQRES 17 B 214 SER LEU SER LEU GLY LYS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG C 5 14 HET MAN C 6 11 HET NAG C 7 14 HET FUC C 8 10 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG D 5 14 HET MAN D 6 11 HET NAG D 7 14 HET FUC D 8 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 NAG 8(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 MAN 4(C6 H12 O6) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 5 HOH *20(H2 O) HELIX 1 AA1 LYS A 246 MET A 252 1 7 HELIX 2 AA2 LEU A 309 ASN A 315 1 7 HELIX 3 AA3 SER A 354 LYS A 360 5 7 HELIX 4 AA4 LYS A 414 GLU A 419 1 6 HELIX 5 AA5 LEU A 432 TYR A 436 5 5 HELIX 6 AA6 LYS B 246 LEU B 251 1 6 HELIX 7 AA7 LEU B 309 ASN B 315 1 7 HELIX 8 AA8 SER B 354 LYS B 360 5 7 HELIX 9 AA9 LYS B 414 GLU B 419 1 6 HELIX 10 AB1 LEU B 432 TYR B 436 5 5 SHEET 1 AA1 4 SER A 239 PHE A 243 0 SHEET 2 AA1 4 GLU A 258 VAL A 266 -1 O THR A 260 N PHE A 243 SHEET 3 AA1 4 TYR A 300 THR A 307 -1 O VAL A 302 N VAL A 263 SHEET 4 AA1 4 ALA A 287 THR A 289 -1 N LYS A 288 O VAL A 305 SHEET 1 AA2 4 SER A 239 PHE A 243 0 SHEET 2 AA2 4 GLU A 258 VAL A 266 -1 O THR A 260 N PHE A 243 SHEET 3 AA2 4 TYR A 300 THR A 307 -1 O VAL A 302 N VAL A 263 SHEET 4 AA2 4 GLU A 293 GLU A 294 -1 N GLU A 293 O ARG A 301 SHEET 1 AA3 4 VAL A 282 VAL A 284 0 SHEET 2 AA3 4 VAL A 273 VAL A 279 -1 N VAL A 279 O VAL A 282 SHEET 3 AA3 4 TYR A 319 ASN A 325 -1 O SER A 324 N GLN A 274 SHEET 4 AA3 4 ILE A 332 ILE A 336 -1 O ILE A 336 N TYR A 319 SHEET 1 AA4 4 GLN A 347 LEU A 351 0 SHEET 2 AA4 4 GLN A 362 PHE A 372 -1 O THR A 366 N LEU A 351 SHEET 3 AA4 4 PHE A 404 ASP A 413 -1 O LEU A 410 N LEU A 365 SHEET 4 AA4 4 TYR A 391 THR A 393 -1 N LYS A 392 O ARG A 409 SHEET 1 AA5 4 GLN A 347 LEU A 351 0 SHEET 2 AA5 4 GLN A 362 PHE A 372 -1 O THR A 366 N LEU A 351 SHEET 3 AA5 4 PHE A 404 ASP A 413 -1 O LEU A 410 N LEU A 365 SHEET 4 AA5 4 VAL A 397 LEU A 398 -1 N VAL A 397 O PHE A 405 SHEET 1 AA6 4 GLN A 386 PRO A 387 0 SHEET 2 AA6 4 ALA A 378 SER A 383 -1 N SER A 383 O GLN A 386 SHEET 3 AA6 4 VAL A 422 MET A 428 -1 O SER A 426 N GLU A 380 SHEET 4 AA6 4 THR A 437 SER A 442 -1 O LEU A 441 N PHE A 423 SHEET 1 AA7 4 SER B 239 PHE B 243 0 SHEET 2 AA7 4 GLU B 258 VAL B 266 -1 O THR B 260 N PHE B 243 SHEET 3 AA7 4 TYR B 300 THR B 307 -1 O LEU B 306 N VAL B 259 SHEET 4 AA7 4 LYS B 288 LYS B 290 -1 N LYS B 290 O VAL B 303 SHEET 1 AA8 4 VAL B 282 VAL B 284 0 SHEET 2 AA8 4 VAL B 273 VAL B 279 -1 N VAL B 279 O VAL B 282 SHEET 3 AA8 4 TYR B 319 ASN B 325 -1 O SER B 324 N GLN B 274 SHEET 4 AA8 4 ILE B 332 ILE B 336 -1 O ILE B 336 N TYR B 319 SHEET 1 AA9 4 GLN B 347 LEU B 351 0 SHEET 2 AA9 4 GLN B 362 PHE B 372 -1 O LEU B 368 N TYR B 349 SHEET 3 AA9 4 PHE B 404 ASP B 413 -1 O LEU B 410 N LEU B 365 SHEET 4 AA9 4 TYR B 391 THR B 393 -1 N LYS B 392 O ARG B 409 SHEET 1 AB1 4 GLN B 347 LEU B 351 0 SHEET 2 AB1 4 GLN B 362 PHE B 372 -1 O LEU B 368 N TYR B 349 SHEET 3 AB1 4 PHE B 404 ASP B 413 -1 O LEU B 410 N LEU B 365 SHEET 4 AB1 4 VAL B 397 LEU B 398 -1 N VAL B 397 O PHE B 405 SHEET 1 AB2 4 GLN B 386 PRO B 387 0 SHEET 2 AB2 4 ALA B 378 SER B 383 -1 N SER B 383 O GLN B 386 SHEET 3 AB2 4 PHE B 423 MET B 428 -1 O SER B 426 N GLU B 380 SHEET 4 AB2 4 THR B 437 LEU B 441 -1 O THR B 437 N VAL B 427 SSBOND 1 CYS A 261 CYS A 321 1555 1555 2.04 SSBOND 2 CYS A 367 CYS A 425 1555 1555 2.04 SSBOND 3 CYS B 261 CYS B 321 1555 1555 2.03 SSBOND 4 CYS B 367 CYS B 425 1555 1555 2.03 LINK ND2 ASN A 297 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 297 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 8 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O6 BMA C 3 C1 MAN C 6 1555 1555 1.44 LINK O2 MAN C 4 C1 NAG C 5 1555 1555 1.44 LINK O2 MAN C 6 C1 NAG C 7 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O6 NAG D 1 C1 FUC D 8 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.45 LINK O6 BMA D 3 C1 MAN D 6 1555 1555 1.45 LINK O2 MAN D 4 C1 NAG D 5 1555 1555 1.44 LINK O2 MAN D 6 C1 NAG D 7 1555 1555 1.44 CISPEP 1 TYR A 373 PRO A 374 0 -1.11 CISPEP 2 TYR B 373 PRO B 374 0 -2.32 CRYST1 73.294 81.934 103.883 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013644 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012205 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009626 0.00000