PDB Short entry for 5N4W HEADER LIGASE 11-FEB-17 5N4W TITLE CRYSTAL STRUCTURE OF THE CUL2-RBX1-ELOBC-VHL UBIQUITIN LIGASE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CULLIN-2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CUL-2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR; COMPND 8 CHAIN: V; COMPND 9 SYNONYM: PROTEIN G7,PVHL; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RBX1; COMPND 13 CHAIN: R; COMPND 14 SYNONYM: PROTEIN ZYP,RING FINGER PROTEIN 75,RING-BOX PROTEIN 1,RBX1, COMPND 15 REGULATOR OF CULLINS 1; COMPND 16 EC: 6.3.2.-; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 4; COMPND 19 MOLECULE: ELONGIN-B; COMPND 20 CHAIN: B; COMPND 21 SYNONYM: ELOB,ELONGIN 18 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 22 FACTOR SIII SUBUNIT B,SIII P18,TRANSCRIPTION ELONGATION FACTOR B COMPND 23 POLYPEPTIDE 2; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 5; COMPND 26 MOLECULE: ELONGIN-C; COMPND 27 CHAIN: C; COMPND 28 SYNONYM: ELOC,ELONGIN 15 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 29 FACTOR SIII SUBUNIT C,SIII P15,TRANSCRIPTION ELONGATION FACTOR B COMPND 30 POLYPEPTIDE 1; COMPND 31 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CUL2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: VHL; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 MOL_ID: 3; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_COMMON: HUMAN; SOURCE 21 ORGANISM_TAXID: 9606; SOURCE 22 GENE: RBX1, RNF75, ROC1; SOURCE 23 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 24 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 26 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 27 MOL_ID: 4; SOURCE 28 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 29 ORGANISM_COMMON: HUMAN; SOURCE 30 ORGANISM_TAXID: 9606; SOURCE 31 GENE: ELOB, TCEB2; SOURCE 32 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 33 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 34 MOL_ID: 5; SOURCE 35 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 36 ORGANISM_COMMON: HUMAN; SOURCE 37 ORGANISM_TAXID: 9606; SOURCE 38 GENE: ELOC, TCEB1; SOURCE 39 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 40 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CULLIN RING, E3 UBIQUITIN LIGASE, VHL, LIGASE, CULLIN-2 EXPDTA X-RAY DIFFRACTION AUTHOR T.A.F.CARDOTE,M.S.GADD,A.CIULLI REVDAT 4 24-APR-19 5N4W 1 SOURCE REVDAT 3 24-OCT-18 5N4W 1 REMARK LINK REVDAT 2 21-JUN-17 5N4W 1 JRNL REVDAT 1 07-JUN-17 5N4W 0 JRNL AUTH T.A.F.CARDOTE,M.S.GADD,A.CIULLI JRNL TITL CRYSTAL STRUCTURE OF THE CUL2-RBX1-ELOBC-VHL UBIQUITIN JRNL TITL 2 LIGASE COMPLEX. JRNL REF STRUCTURE V. 25 901 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 28591624 JRNL DOI 10.1016/J.STR.2017.04.009 REMARK 2 REMARK 2 RESOLUTION. 3.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11_2558: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 95.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 34407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.304 REMARK 3 R VALUE (WORKING SET) : 0.302 REMARK 3 FREE R VALUE : 0.346 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.240 REMARK 3 FREE R VALUE TEST SET COUNT : 1802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 95.5096 - 9.1678 0.99 2523 132 0.2378 0.2543 REMARK 3 2 9.1678 - 7.2776 1.00 2510 144 0.2965 0.4164 REMARK 3 3 7.2776 - 6.3579 1.00 2534 132 0.3463 0.3968 REMARK 3 4 6.3579 - 5.7767 0.99 2479 139 0.3654 0.3823 REMARK 3 5 5.7767 - 5.3627 0.99 2555 126 0.3389 0.3884 REMARK 3 6 5.3627 - 5.0465 0.99 2513 129 0.3019 0.3205 REMARK 3 7 5.0465 - 4.7938 1.00 2485 162 0.2974 0.3758 REMARK 3 8 4.7938 - 4.5851 0.99 2493 159 0.3068 0.3149 REMARK 3 9 4.5851 - 4.4086 1.00 2568 134 0.3103 0.3438 REMARK 3 10 4.4086 - 4.2565 1.00 2506 142 0.3215 0.3607 REMARK 3 11 4.2565 - 4.1234 0.98 2448 135 0.3410 0.3982 REMARK 3 12 4.1234 - 4.0055 0.99 2509 133 0.3506 0.3771 REMARK 3 13 4.0055 - 3.9001 0.99 2482 135 0.3973 0.4026 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.680 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 40.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 200.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 191.0 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7855 REMARK 3 ANGLE : 0.692 10574 REMARK 3 CHIRALITY : 0.043 1195 REMARK 3 PLANARITY : 0.004 1346 REMARK 3 DIHEDRAL : 3.499 5127 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 163) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3345 3.0801 -61.2783 REMARK 3 T TENSOR REMARK 3 T11: 1.0689 T22: 2.2287 REMARK 3 T33: 1.4286 T12: -0.3334 REMARK 3 T13: -0.6835 T23: 0.0869 REMARK 3 L TENSOR REMARK 3 L11: 0.4416 L22: 2.6024 REMARK 3 L33: 0.9859 L12: -0.9161 REMARK 3 L13: -0.4704 L23: 0.0327 REMARK 3 S TENSOR REMARK 3 S11: 1.4110 S12: -0.8893 S13: -0.4805 REMARK 3 S21: -0.5002 S22: -0.4473 S23: 0.0407 REMARK 3 S31: 0.5873 S32: 0.2498 S33: 0.7896 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7137 -6.9799 -34.8271 REMARK 3 T TENSOR REMARK 3 T11: 0.8643 T22: 1.2219 REMARK 3 T33: 0.3861 T12: -0.2563 REMARK 3 T13: -0.1499 T23: -0.4484 REMARK 3 L TENSOR REMARK 3 L11: 2.6601 L22: 1.8008 REMARK 3 L33: 4.4624 L12: 1.5957 REMARK 3 L13: 1.5672 L23: -0.7209 REMARK 3 S TENSOR REMARK 3 S11: 0.5151 S12: 0.4970 S13: -1.5810 REMARK 3 S21: -0.3201 S22: -0.4902 S23: -0.6268 REMARK 3 S31: 1.9262 S32: -0.1380 S33: -1.9091 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4750 3.9890 -10.4271 REMARK 3 T TENSOR REMARK 3 T11: 1.0145 T22: 0.6923 REMARK 3 T33: 0.6978 T12: -0.1987 REMARK 3 T13: -0.0458 T23: 0.2188 REMARK 3 L TENSOR REMARK 3 L11: 6.6025 L22: 4.3182 REMARK 3 L33: 4.0187 L12: 2.2955 REMARK 3 L13: 3.0674 L23: 3.5745 REMARK 3 S TENSOR REMARK 3 S11: 0.5896 S12: 0.0704 S13: 1.0121 REMARK 3 S21: 0.5913 S22: -0.6006 S23: -0.5931 REMARK 3 S31: 1.1456 S32: -0.2406 S33: -0.1875 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 385 THROUGH 745 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5049 34.3277 8.3282 REMARK 3 T TENSOR REMARK 3 T11: 1.2817 T22: 0.9750 REMARK 3 T33: 1.2739 T12: -0.0270 REMARK 3 T13: -0.1324 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 3.3887 L22: 2.7737 REMARK 3 L33: 1.1465 L12: 2.3656 REMARK 3 L13: 1.2059 L23: -0.6650 REMARK 3 S TENSOR REMARK 3 S11: 0.4383 S12: -0.4654 S13: -0.5272 REMARK 3 S21: 0.7327 S22: -0.1995 S23: -0.2278 REMARK 3 S31: -0.4248 S32: 0.0227 S33: -0.2087 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 157 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4166 36.3384 -64.3799 REMARK 3 T TENSOR REMARK 3 T11: 2.7599 T22: 4.9135 REMARK 3 T33: 1.7178 T12: 2.2711 REMARK 3 T13: -0.0416 T23: 0.5893 REMARK 3 L TENSOR REMARK 3 L11: 3.8190 L22: 0.6587 REMARK 3 L33: 2.3176 L12: 1.3946 REMARK 3 L13: 1.6200 L23: 1.0974 REMARK 3 S TENSOR REMARK 3 S11: -0.0845 S12: 0.0787 S13: 0.2800 REMARK 3 S21: -0.5578 S22: -0.0792 S23: 0.4548 REMARK 3 S31: -0.2568 S32: 0.2531 S33: 0.2607 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 170 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.6138 38.7758 -65.2808 REMARK 3 T TENSOR REMARK 3 T11: 2.9341 T22: 4.1075 REMARK 3 T33: 4.4692 T12: 1.2560 REMARK 3 T13: 1.6627 T23: -0.1328 REMARK 3 L TENSOR REMARK 3 L11: 0.2834 L22: 0.0010 REMARK 3 L33: 1.6384 L12: -0.0082 REMARK 3 L13: -0.6799 L23: 0.0144 REMARK 3 S TENSOR REMARK 3 S11: -0.3704 S12: -0.0463 S13: 0.1389 REMARK 3 S21: 0.2860 S22: 0.0839 S23: -0.0599 REMARK 3 S31: 0.5034 S32: -0.0416 S33: 0.1952 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 175 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.6655 28.7954 -67.2672 REMARK 3 T TENSOR REMARK 3 T11: 1.8979 T22: 3.7251 REMARK 3 T33: 5.7989 T12: -0.4477 REMARK 3 T13: -0.2185 T23: 0.4033 REMARK 3 L TENSOR REMARK 3 L11: 1.0940 L22: 3.9026 REMARK 3 L33: 1.9340 L12: -1.1519 REMARK 3 L13: 0.1177 L23: -0.3047 REMARK 3 S TENSOR REMARK 3 S11: 1.4182 S12: -3.7635 S13: 0.4264 REMARK 3 S21: -0.5461 S22: 0.7130 S23: 0.0162 REMARK 3 S31: 0.6000 S32: -0.9840 S33: -2.0622 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 185 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.7566 31.7704 -58.7414 REMARK 3 T TENSOR REMARK 3 T11: 3.3408 T22: 4.6010 REMARK 3 T33: 1.8977 T12: 2.5002 REMARK 3 T13: -0.0999 T23: -0.3595 REMARK 3 L TENSOR REMARK 3 L11: 7.8289 L22: 6.8594 REMARK 3 L33: 3.6211 L12: -6.4760 REMARK 3 L13: -1.9960 L23: 3.8285 REMARK 3 S TENSOR REMARK 3 S11: 1.3507 S12: 1.5725 S13: 1.1976 REMARK 3 S21: -1.6292 S22: -0.7883 S23: -0.9787 REMARK 3 S31: 0.0909 S32: -0.3411 S33: 0.5941 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 17 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.0442 45.0616 12.0342 REMARK 3 T TENSOR REMARK 3 T11: 1.0551 T22: 1.4693 REMARK 3 T33: 1.9921 T12: -0.2412 REMARK 3 T13: -0.2591 T23: 0.3776 REMARK 3 L TENSOR REMARK 3 L11: 5.4695 L22: 5.0819 REMARK 3 L33: 4.1034 L12: -3.3631 REMARK 3 L13: 1.5711 L23: 0.6260 REMARK 3 S TENSOR REMARK 3 S11: 0.2816 S12: -1.0039 S13: 1.1395 REMARK 3 S21: 0.1591 S22: -0.7327 S23: -1.4716 REMARK 3 S31: 0.7498 S32: 0.8090 S33: 0.2479 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 40 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0964 49.7187 15.3168 REMARK 3 T TENSOR REMARK 3 T11: 2.1877 T22: 1.7940 REMARK 3 T33: 4.1069 T12: 0.1148 REMARK 3 T13: -0.3588 T23: -1.1907 REMARK 3 L TENSOR REMARK 3 L11: 0.9618 L22: 5.1236 REMARK 3 L33: 6.0420 L12: 1.7897 REMARK 3 L13: 1.6618 L23: 0.7178 REMARK 3 S TENSOR REMARK 3 S11: -1.2555 S12: -0.6793 S13: 1.1224 REMARK 3 S21: -0.4194 S22: -1.2611 S23: 0.8705 REMARK 3 S31: 0.2689 S32: -2.4303 S33: 1.5632 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3664 36.4351 -85.7069 REMARK 3 T TENSOR REMARK 3 T11: 2.9877 T22: 3.2780 REMARK 3 T33: 2.0168 T12: -0.0367 REMARK 3 T13: 0.2935 T23: 0.0999 REMARK 3 L TENSOR REMARK 3 L11: 4.6330 L22: 3.5227 REMARK 3 L33: 0.1523 L12: 2.8189 REMARK 3 L13: 0.8571 L23: 0.6830 REMARK 3 S TENSOR REMARK 3 S11: 1.1701 S12: -0.8976 S13: 1.7102 REMARK 3 S21: -0.5568 S22: -0.0118 S23: -0.3669 REMARK 3 S31: -2.0484 S32: -1.7834 S33: -0.1751 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 17 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5196 27.7148 -72.2335 REMARK 3 T TENSOR REMARK 3 T11: 1.9334 T22: 2.6424 REMARK 3 T33: 1.0703 T12: -0.3529 REMARK 3 T13: -0.3580 T23: 0.6579 REMARK 3 L TENSOR REMARK 3 L11: 1.9764 L22: 2.6639 REMARK 3 L33: 4.2153 L12: -0.8038 REMARK 3 L13: 1.4942 L23: 0.9370 REMARK 3 S TENSOR REMARK 3 S11: -0.5457 S12: 1.5225 S13: 1.5369 REMARK 3 S21: -1.0610 S22: 0.5154 S23: -0.2467 REMARK 3 S31: -2.1753 S32: 0.2148 S33: 0.5464 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N4W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003519. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.928 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34407 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.900 REMARK 200 RESOLUTION RANGE LOW (A) : 95.481 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.73200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: HOMOLOGY MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 7.6, 0.15 M AMMONIUM REMARK 280 SULPHATE, 15% POLYETHYLENEGLYCOL 4000 AND 3% 1,4-DIOXANE OR 4% REMARK 280 ACETONITRILE. THE SAMPLE WAS CRYSTALLISED IN THE PRESENCE OF A REMARK 280 19-MER PEPTIDE MIMICKING THE SUBSTRATE HIF-1ALPHA - RESIDUES 559- REMARK 280 577 (DEALAPYIPMDDDFQLRSF, WITH THE MUTATIONS L559D AND M561A AND REMARK 280 P564 IS HYDROXYPROLINE)., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 119.44250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 119.44250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.01900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 95.48100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.01900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 95.48100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 119.44250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.01900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 95.48100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 119.44250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.01900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 95.48100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -174.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, V, R, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 LYS A 117 REMARK 465 LEU A 118 REMARK 465 THR A 119 REMARK 465 GLU A 120 REMARK 465 ALA A 121 REMARK 465 ASP A 122 REMARK 465 LEU A 123 REMARK 465 GLN A 124 REMARK 465 TYR A 125 REMARK 465 GLY A 126 REMARK 465 TYR A 127 REMARK 465 GLY A 128 REMARK 465 GLY A 129 REMARK 465 VAL A 130 REMARK 465 ASP A 131 REMARK 465 MET A 132 REMARK 465 ASN A 133 REMARK 465 GLU A 134 REMARK 465 TYR A 194 REMARK 465 LYS A 195 REMARK 465 LYS A 196 REMARK 465 LYS A 197 REMARK 465 LYS A 291 REMARK 465 LYS A 382 REMARK 465 LYS A 404 REMARK 465 ILE A 501 REMARK 465 ASP A 502 REMARK 465 LEU A 503 REMARK 465 GLY A 504 REMARK 465 ILE A 505 REMARK 465 SER A 524 REMARK 465 SER A 525 REMARK 465 THR A 526 REMARK 465 PHE A 527 REMARK 465 ALA A 528 REMARK 465 ILE A 529 REMARK 465 TYR A 568 REMARK 465 GLY A 570 REMARK 465 TYR A 573 REMARK 465 LEU A 585 REMARK 465 LEU A 586 REMARK 465 ALA A 587 REMARK 465 PHE A 588 REMARK 465 ASN A 589 REMARK 465 ASN A 590 REMARK 465 THR A 593 REMARK 465 LYS A 615 REMARK 465 HIS A 625 REMARK 465 ASP A 626 REMARK 465 SER A 627 REMARK 465 GLU A 628 REMARK 465 LYS A 629 REMARK 465 GLU A 630 REMARK 465 ASP A 631 REMARK 465 ILE A 632 REMARK 465 ASP A 633 REMARK 465 ALA A 634 REMARK 465 SER A 645 REMARK 465 SER A 646 REMARK 465 LYS A 647 REMARK 465 ARG A 648 REMARK 465 THR A 649 REMARK 465 LYS A 650 REMARK 465 PHE A 651 REMARK 465 LYS A 652 REMARK 465 ILE A 653 REMARK 465 THR A 654 REMARK 465 THR A 655 REMARK 465 SER A 656 REMARK 465 MET A 657 REMARK 465 GLN A 658 REMARK 465 LYS A 659 REMARK 465 ASP A 660 REMARK 465 GLN A 729 REMARK 465 MET V 54 REMARK 465 GLU V 55 REMARK 465 ALA V 56 REMARK 465 GLY V 57 REMARK 465 ARG V 58 REMARK 465 PRO V 59 REMARK 465 ARG V 60 REMARK 465 PRO V 61 REMARK 465 VAL V 62 REMARK 465 LEU V 63 REMARK 465 ARG V 64 REMARK 465 SER V 65 REMARK 465 VAL V 66 REMARK 465 ASN V 67 REMARK 465 SER V 68 REMARK 465 ARG V 69 REMARK 465 GLU V 70 REMARK 465 PRO V 71 REMARK 465 SER V 72 REMARK 465 GLN V 73 REMARK 465 VAL V 74 REMARK 465 ILE V 75 REMARK 465 PHE V 76 REMARK 465 CYS V 77 REMARK 465 ASN V 78 REMARK 465 ARG V 79 REMARK 465 SER V 80 REMARK 465 PRO V 81 REMARK 465 ARG V 82 REMARK 465 VAL V 83 REMARK 465 VAL V 84 REMARK 465 LEU V 85 REMARK 465 PRO V 86 REMARK 465 VAL V 87 REMARK 465 TRP V 88 REMARK 465 LEU V 89 REMARK 465 ASN V 90 REMARK 465 PHE V 91 REMARK 465 ASP V 92 REMARK 465 GLY V 93 REMARK 465 GLU V 94 REMARK 465 PRO V 95 REMARK 465 GLN V 96 REMARK 465 PRO V 97 REMARK 465 TYR V 98 REMARK 465 PRO V 99 REMARK 465 THR V 100 REMARK 465 LEU V 101 REMARK 465 PRO V 102 REMARK 465 PRO V 103 REMARK 465 GLY V 104 REMARK 465 THR V 105 REMARK 465 GLY V 106 REMARK 465 ARG V 107 REMARK 465 ARG V 108 REMARK 465 ILE V 109 REMARK 465 HIS V 110 REMARK 465 SER V 111 REMARK 465 TYR V 112 REMARK 465 ARG V 113 REMARK 465 GLY V 114 REMARK 465 HIS V 115 REMARK 465 LEU V 116 REMARK 465 TRP V 117 REMARK 465 LEU V 118 REMARK 465 PHE V 119 REMARK 465 ARG V 120 REMARK 465 ASP V 121 REMARK 465 ALA V 122 REMARK 465 GLY V 123 REMARK 465 THR V 124 REMARK 465 HIS V 125 REMARK 465 ASP V 126 REMARK 465 GLY V 127 REMARK 465 LEU V 128 REMARK 465 LEU V 129 REMARK 465 VAL V 130 REMARK 465 ASN V 131 REMARK 465 GLN V 132 REMARK 465 THR V 133 REMARK 465 GLU V 134 REMARK 465 LEU V 135 REMARK 465 PHE V 136 REMARK 465 VAL V 137 REMARK 465 PRO V 138 REMARK 465 SER V 139 REMARK 465 LEU V 140 REMARK 465 ASN V 141 REMARK 465 VAL V 142 REMARK 465 ASP V 143 REMARK 465 GLY V 144 REMARK 465 GLN V 145 REMARK 465 PRO V 146 REMARK 465 ILE V 147 REMARK 465 PHE V 148 REMARK 465 ALA V 149 REMARK 465 ASN V 150 REMARK 465 ILE V 151 REMARK 465 THR V 152 REMARK 465 LEU V 153 REMARK 465 PRO V 154 REMARK 465 VAL V 155 REMARK 465 TYR V 156 REMARK 465 VAL V 194 REMARK 465 GLN V 195 REMARK 465 LYS V 196 REMARK 465 ASP V 197 REMARK 465 LEU V 198 REMARK 465 GLU V 199 REMARK 465 ARG V 200 REMARK 465 LEU V 201 REMARK 465 THR V 202 REMARK 465 GLN V 203 REMARK 465 GLU V 204 REMARK 465 ARG V 205 REMARK 465 ILE V 206 REMARK 465 ALA V 207 REMARK 465 HIS V 208 REMARK 465 GLN V 209 REMARK 465 ARG V 210 REMARK 465 MET V 211 REMARK 465 GLY V 212 REMARK 465 ASP V 213 REMARK 465 MET R 1 REMARK 465 ALA R 2 REMARK 465 ALA R 3 REMARK 465 ALA R 4 REMARK 465 MET R 5 REMARK 465 ASP R 6 REMARK 465 VAL R 7 REMARK 465 ASP R 8 REMARK 465 THR R 9 REMARK 465 PRO R 10 REMARK 465 SER R 11 REMARK 465 GLY R 12 REMARK 465 THR R 13 REMARK 465 ASN R 14 REMARK 465 SER R 15 REMARK 465 GLY R 16 REMARK 465 HIS B 10 REMARK 465 LYS B 11 REMARK 465 ALA B 18 REMARK 465 LYS B 19 REMARK 465 GLU B 20 REMARK 465 SER B 21 REMARK 465 GLY B 61 REMARK 465 PHE B 62 REMARK 465 THR B 63 REMARK 465 VAL B 75 REMARK 465 GLY B 76 REMARK 465 LEU B 88 REMARK 465 CYS B 89 REMARK 465 ILE B 90 REMARK 465 GLU B 91 REMARK 465 GLU B 98 REMARK 465 LEU B 99 REMARK 465 PRO B 100 REMARK 465 ASP B 101 REMARK 465 VAL B 102 REMARK 465 MET B 103 REMARK 465 LYS B 104 REMARK 465 MET C 16 REMARK 465 PHE C 52 REMARK 465 GLU C 54 REMARK 465 ASN C 55 REMARK 465 GLU C 56 REMARK 465 THR C 57 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 58 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 76 CG1 CG2 REMARK 470 TYR A 90 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 136 CG CD1 CD2 REMARK 470 MET A 137 CG SD CE REMARK 470 TRP A 147 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 147 CZ3 CH2 REMARK 470 LYS A 238 CG CD CE NZ REMARK 470 HIS A 255 CG ND1 CD2 CE1 NE2 REMARK 470 TYR A 378 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 398 CG CD1 CD2 REMARK 470 PHE A 422 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 442 CG CD NE CZ NH1 NH2 REMARK 470 MET A 449 CG SD CE REMARK 470 LYS A 462 CG CD CE NZ REMARK 470 ILE A 494 CG1 CG2 CD1 REMARK 470 PRO A 530 CG CD REMARK 470 GLN A 531 CG CD OE1 NE2 REMARK 470 GLU A 532 CG CD OE1 OE2 REMARK 470 LEU A 533 CG CD1 CD2 REMARK 470 GLU A 534 CG CD OE1 OE2 REMARK 470 LYS A 535 CG CD CE NZ REMARK 470 VAL A 537 CB CG1 CG2 REMARK 470 PHE A 540 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 542 CG CD1 CD2 REMARK 470 ARG A 710 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 720 CG CD CE NZ REMARK 470 TYR A 741 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ALA R 17 CB REMARK 470 GLN R 57 CG CD OE1 NE2 REMARK 470 TRP R 101 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP R 101 CZ3 CH2 REMARK 470 ARG B 8 CG CD NE CZ NH1 NH2 REMARK 470 THR B 12 OG1 CG2 REMARK 470 ASP B 52 CG OD1 OD2 REMARK 470 ARG B 80 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 82 CG OD1 OD2 REMARK 470 PHE B 85 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG C 63 CG CD NE CZ NH1 NH2 REMARK 470 TYR C 83 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR C 88 CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 533 N LYS A 535 1.22 REMARK 500 NE ARG A 475 OE2 GLU R 66 2.09 REMARK 500 C LEU A 533 N LYS A 535 2.12 REMARK 500 O LEU A 533 CA LYS A 535 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 530 N - CA - CB ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 47 -64.96 -122.95 REMARK 500 PRO A 50 44.95 -82.04 REMARK 500 GLU A 81 -2.80 67.60 REMARK 500 GLU A 138 73.81 59.33 REMARK 500 PRO A 154 -7.29 -55.55 REMARK 500 HIS A 190 -21.54 -141.01 REMARK 500 SER A 257 -7.44 -59.73 REMARK 500 ALA A 272 -7.33 71.46 REMARK 500 GLN A 332 -2.25 65.87 REMARK 500 ASN A 334 57.48 35.62 REMARK 500 ASN A 359 27.28 49.50 REMARK 500 LYS A 386 1.68 58.33 REMARK 500 ASN A 409 -0.98 66.12 REMARK 500 ASN A 496 16.38 -140.40 REMARK 500 GLN A 497 -148.15 -138.37 REMARK 500 THR A 499 -163.04 54.43 REMARK 500 ALA A 514 -0.85 67.14 REMARK 500 LEU A 533 -169.34 -117.69 REMARK 500 GLU A 534 -17.41 -5.83 REMARK 500 LYS A 535 -148.79 73.23 REMARK 500 SER A 536 6.32 92.74 REMARK 500 LYS A 565 71.36 73.92 REMARK 500 THR A 578 -51.22 -123.40 REMARK 500 TYR A 580 62.12 66.18 REMARK 500 SER A 595 -179.59 -68.82 REMARK 500 VAL A 620 -69.54 -96.94 REMARK 500 LYS A 621 -39.07 -135.03 REMARK 500 GLN A 701 -16.85 75.58 REMARK 500 SER A 707 30.02 -88.17 REMARK 500 SER A 734 -61.25 -94.33 REMARK 500 LYS R 26 130.45 -32.84 REMARK 500 THR R 69 103.04 -161.28 REMARK 500 ARG R 99 -168.47 -126.51 REMARK 500 LYS B 46 74.83 -112.86 REMARK 500 ASP B 47 -19.21 60.41 REMARK 500 ASP B 48 -0.31 -149.06 REMARK 500 ALA B 71 72.06 -161.08 REMARK 500 ASP B 82 -67.53 -97.83 REMARK 500 ASP B 83 -50.59 -126.52 REMARK 500 ASP C 111 19.29 59.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN R 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS R 45 SG REMARK 620 2 CYS R 83 SG 94.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN R 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS R 53 SG REMARK 620 2 CYS R 56 SG 112.6 REMARK 620 3 HIS R 82 NE2 65.9 86.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN R 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN R 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN R 203 DBREF 5N4W A 1 745 UNP Q13617 CUL2_HUMAN 1 745 DBREF 5N4W V 54 213 UNP P40337 VHL_HUMAN 54 213 DBREF 5N4W R 1 102 UNP P62877 RBX1_HUMAN 1 102 DBREF 5N4W B 1 104 UNP Q15370 ELOB_HUMAN 1 104 DBREF 5N4W C 17 112 UNP Q15369 ELOC_HUMAN 17 112 SEQADV 5N4W GLY A -2 UNP Q13617 EXPRESSION TAG SEQADV 5N4W GLY A -1 UNP Q13617 EXPRESSION TAG SEQADV 5N4W SER A 0 UNP Q13617 EXPRESSION TAG SEQADV 5N4W LYS R 18 UNP P62877 GLY 18 CONFLICT SEQADV 5N4W MET C 16 UNP Q15369 INITIATING METHIONINE SEQRES 1 A 748 GLY GLY SER MET SER LEU LYS PRO ARG VAL VAL ASP PHE SEQRES 2 A 748 ASP GLU THR TRP ASN LYS LEU LEU THR THR ILE LYS ALA SEQRES 3 A 748 VAL VAL MET LEU GLU TYR VAL GLU ARG ALA THR TRP ASN SEQRES 4 A 748 ASP ARG PHE SER ASP ILE TYR ALA LEU CYS VAL ALA TYR SEQRES 5 A 748 PRO GLU PRO LEU GLY GLU ARG LEU TYR THR GLU THR LYS SEQRES 6 A 748 ILE PHE LEU GLU ASN HIS VAL ARG HIS LEU HIS LYS ARG SEQRES 7 A 748 VAL LEU GLU SER GLU GLU GLN VAL LEU VAL MET TYR HIS SEQRES 8 A 748 ARG TYR TRP GLU GLU TYR SER LYS GLY ALA ASP TYR MET SEQRES 9 A 748 ASP CYS LEU TYR ARG TYR LEU ASN THR GLN PHE ILE LYS SEQRES 10 A 748 LYS ASN LYS LEU THR GLU ALA ASP LEU GLN TYR GLY TYR SEQRES 11 A 748 GLY GLY VAL ASP MET ASN GLU PRO LEU MET GLU ILE GLY SEQRES 12 A 748 GLU LEU ALA LEU ASP MET TRP ARG LYS LEU MET VAL GLU SEQRES 13 A 748 PRO LEU GLN ALA ILE LEU ILE ARG MET LEU LEU ARG GLU SEQRES 14 A 748 ILE LYS ASN ASP ARG GLY GLY GLU ASP PRO ASN GLN LYS SEQRES 15 A 748 VAL ILE HIS GLY VAL ILE ASN SER PHE VAL HIS VAL GLU SEQRES 16 A 748 GLN TYR LYS LYS LYS PHE PRO LEU LYS PHE TYR GLN GLU SEQRES 17 A 748 ILE PHE GLU SER PRO PHE LEU THR GLU THR GLY GLU TYR SEQRES 18 A 748 TYR LYS GLN GLU ALA SER ASN LEU LEU GLN GLU SER ASN SEQRES 19 A 748 CYS SER GLN TYR MET GLU LYS VAL LEU GLY ARG LEU LYS SEQRES 20 A 748 ASP GLU GLU ILE ARG CYS ARG LYS TYR LEU HIS PRO SER SEQRES 21 A 748 SER TYR THR LYS VAL ILE HIS GLU CYS GLN GLN ARG MET SEQRES 22 A 748 VAL ALA ASP HIS LEU GLN PHE LEU HIS ALA GLU CYS HIS SEQRES 23 A 748 ASN ILE ILE ARG GLN GLU LYS LYS ASN ASP MET ALA ASN SEQRES 24 A 748 MET TYR VAL LEU LEU ARG ALA VAL SER THR GLY LEU PRO SEQRES 25 A 748 HIS MET ILE GLN GLU LEU GLN ASN HIS ILE HIS ASP GLU SEQRES 26 A 748 GLY LEU ARG ALA THR SER ASN LEU THR GLN GLU ASN MET SEQRES 27 A 748 PRO THR LEU PHE VAL GLU SER VAL LEU GLU VAL HIS GLY SEQRES 28 A 748 LYS PHE VAL GLN LEU ILE ASN THR VAL LEU ASN GLY ASP SEQRES 29 A 748 GLN HIS PHE MET SER ALA LEU ASP LYS ALA LEU THR SER SEQRES 30 A 748 VAL VAL ASN TYR ARG GLU PRO LYS SER VAL CYS LYS ALA SEQRES 31 A 748 PRO GLU LEU LEU ALA LYS TYR CYS ASP ASN LEU LEU LYS SEQRES 32 A 748 LYS SER ALA LYS GLY MET THR GLU ASN GLU VAL GLU ASP SEQRES 33 A 748 ARG LEU THR SER PHE ILE THR VAL PHE LYS TYR ILE ASP SEQRES 34 A 748 ASP LYS ASP VAL PHE GLN LYS PHE TYR ALA ARG MET LEU SEQRES 35 A 748 ALA LYS ARG LEU ILE HIS GLY LEU SER MET SER MET ASP SEQRES 36 A 748 SER GLU GLU ALA MET ILE ASN LYS LEU LYS GLN ALA CYS SEQRES 37 A 748 GLY TYR GLU PHE THR SER LYS LEU HIS ARG MET TYR THR SEQRES 38 A 748 ASP MET SER VAL SER ALA ASP LEU ASN ASN LYS PHE ASN SEQRES 39 A 748 ASN PHE ILE LYS ASN GLN ASP THR VAL ILE ASP LEU GLY SEQRES 40 A 748 ILE SER PHE GLN ILE TYR VAL LEU GLN ALA GLY ALA TRP SEQRES 41 A 748 PRO LEU THR GLN ALA PRO SER SER THR PHE ALA ILE PRO SEQRES 42 A 748 GLN GLU LEU GLU LYS SER VAL GLN MET PHE GLU LEU PHE SEQRES 43 A 748 TYR SER GLN HIS PHE SER GLY ARG LYS LEU THR TRP LEU SEQRES 44 A 748 HIS TYR LEU CYS THR GLY GLU VAL LYS MET ASN TYR LEU SEQRES 45 A 748 GLY LYS PRO TYR VAL ALA MET VAL THR THR TYR GLN MET SEQRES 46 A 748 ALA VAL LEU LEU ALA PHE ASN ASN SER GLU THR VAL SER SEQRES 47 A 748 TYR LYS GLU LEU GLN ASP SER THR GLN MET ASN GLU LYS SEQRES 48 A 748 GLU LEU THR LYS THR ILE LYS SER LEU LEU ASP VAL LYS SEQRES 49 A 748 MET ILE ASN HIS ASP SER GLU LYS GLU ASP ILE ASP ALA SEQRES 50 A 748 GLU SER SER PHE SER LEU ASN MET ASN PHE SER SER LYS SEQRES 51 A 748 ARG THR LYS PHE LYS ILE THR THR SER MET GLN LYS ASP SEQRES 52 A 748 THR PRO GLN GLU MET GLU GLN THR ARG SER ALA VAL ASP SEQRES 53 A 748 GLU ASP ARG LYS MET TYR LEU GLN ALA ALA ILE VAL ARG SEQRES 54 A 748 ILE MET LYS ALA ARG LYS VAL LEU ARG HIS ASN ALA LEU SEQRES 55 A 748 ILE GLN GLU VAL ILE SER GLN SER ARG ALA ARG PHE ASN SEQRES 56 A 748 PRO SER ILE SER MET ILE LYS LYS CYS ILE GLU VAL LEU SEQRES 57 A 748 ILE ASP LYS GLN TYR ILE GLU ARG SER GLN ALA SER ALA SEQRES 58 A 748 ASP GLU TYR SER TYR VAL ALA SEQRES 1 V 160 MET GLU ALA GLY ARG PRO ARG PRO VAL LEU ARG SER VAL SEQRES 2 V 160 ASN SER ARG GLU PRO SER GLN VAL ILE PHE CYS ASN ARG SEQRES 3 V 160 SER PRO ARG VAL VAL LEU PRO VAL TRP LEU ASN PHE ASP SEQRES 4 V 160 GLY GLU PRO GLN PRO TYR PRO THR LEU PRO PRO GLY THR SEQRES 5 V 160 GLY ARG ARG ILE HIS SER TYR ARG GLY HIS LEU TRP LEU SEQRES 6 V 160 PHE ARG ASP ALA GLY THR HIS ASP GLY LEU LEU VAL ASN SEQRES 7 V 160 GLN THR GLU LEU PHE VAL PRO SER LEU ASN VAL ASP GLY SEQRES 8 V 160 GLN PRO ILE PHE ALA ASN ILE THR LEU PRO VAL TYR THR SEQRES 9 V 160 LEU LYS GLU ARG CYS LEU GLN VAL VAL ARG SER LEU VAL SEQRES 10 V 160 LYS PRO GLU ASN TYR ARG ARG LEU ASP ILE VAL ARG SER SEQRES 11 V 160 LEU TYR GLU ASP LEU GLU ASP HIS PRO ASN VAL GLN LYS SEQRES 12 V 160 ASP LEU GLU ARG LEU THR GLN GLU ARG ILE ALA HIS GLN SEQRES 13 V 160 ARG MET GLY ASP SEQRES 1 R 102 MET ALA ALA ALA MET ASP VAL ASP THR PRO SER GLY THR SEQRES 2 R 102 ASN SER GLY ALA LYS LYS LYS ARG PHE GLU VAL LYS LYS SEQRES 3 R 102 TRP ASN ALA VAL ALA LEU TRP ALA TRP ASP ILE VAL VAL SEQRES 4 R 102 ASP ASN CYS ALA ILE CYS ARG ASN HIS ILE MET ASP LEU SEQRES 5 R 102 CYS ILE GLU CYS GLN ALA ASN GLN ALA SER ALA THR SER SEQRES 6 R 102 GLU GLU CYS THR VAL ALA TRP GLY VAL CYS ASN HIS ALA SEQRES 7 R 102 PHE HIS PHE HIS CYS ILE SER ARG TRP LEU LYS THR ARG SEQRES 8 R 102 GLN VAL CYS PRO LEU ASP ASN ARG GLU TRP GLU SEQRES 1 B 104 MET ASP VAL PHE LEU MET ILE ARG ARG HIS LYS THR THR SEQRES 2 B 104 ILE PHE THR ASP ALA LYS GLU SER SER THR VAL PHE GLU SEQRES 3 B 104 LEU LYS ARG ILE VAL GLU GLY ILE LEU LYS ARG PRO PRO SEQRES 4 B 104 ASP GLU GLN ARG LEU TYR LYS ASP ASP GLN LEU LEU ASP SEQRES 5 B 104 ASP GLY LYS THR LEU GLY GLU CYS GLY PHE THR SER GLN SEQRES 6 B 104 THR ALA ARG PRO GLN ALA PRO ALA THR VAL GLY LEU ALA SEQRES 7 B 104 PHE ARG ALA ASP ASP THR PHE GLU ALA LEU CYS ILE GLU SEQRES 8 B 104 PRO PHE SER SER PRO PRO GLU LEU PRO ASP VAL MET LYS SEQRES 1 C 97 MET MET TYR VAL LYS LEU ILE SER SER ASP GLY HIS GLU SEQRES 2 C 97 PHE ILE VAL LYS ARG GLU HIS ALA LEU THR SER GLY THR SEQRES 3 C 97 ILE LYS ALA MET LEU SER GLY PRO GLY GLN PHE ALA GLU SEQRES 4 C 97 ASN GLU THR ASN GLU VAL ASN PHE ARG GLU ILE PRO SER SEQRES 5 C 97 HIS VAL LEU SER LYS VAL CYS MET TYR PHE THR TYR LYS SEQRES 6 C 97 VAL ARG TYR THR ASN SER SER THR GLU ILE PRO GLU PHE SEQRES 7 C 97 PRO ILE ALA PRO GLU ILE ALA LEU GLU LEU LEU MET ALA SEQRES 8 C 97 ALA ASN PHE LEU ASP CYS HET ZN R 201 1 HET ZN R 202 1 HET ZN R 203 1 HETNAM ZN ZINC ION FORMUL 6 ZN 3(ZN 2+) HELIX 1 AA1 ASP A 11 VAL A 25 1 15 HELIX 2 AA2 MET A 26 GLU A 28 5 3 HELIX 3 AA3 ALA A 33 PHE A 39 1 7 HELIX 4 AA4 PHE A 39 ALA A 44 1 6 HELIX 5 AA5 LEU A 53 SER A 79 1 27 HELIX 6 AA6 GLN A 82 GLU A 93 1 12 HELIX 7 AA7 TYR A 94 TYR A 105 1 12 HELIX 8 AA8 TYR A 105 GLN A 111 1 7 HELIX 9 AA9 GLU A 138 VAL A 152 1 15 HELIX 10 AB1 PRO A 154 ASN A 169 1 16 HELIX 11 AB2 ASN A 177 SER A 187 1 11 HELIX 12 AB3 LEU A 200 PHE A 207 1 8 HELIX 13 AB4 PHE A 207 GLN A 228 1 22 HELIX 14 AB5 ASN A 231 LEU A 254 1 24 HELIX 15 AB6 HIS A 255 SER A 257 5 3 HELIX 16 AB7 SER A 258 MET A 270 1 13 HELIX 17 AB8 HIS A 274 ILE A 286 1 13 HELIX 18 AB9 ASP A 293 ALA A 303 1 11 HELIX 19 AC1 GLY A 307 THR A 327 1 21 HELIX 20 AC2 MET A 335 LEU A 358 1 24 HELIX 21 AC3 GLN A 362 VAL A 376 1 15 HELIX 22 AC4 LYS A 386 LYS A 400 1 15 HELIX 23 AC5 GLU A 410 TYR A 424 1 15 HELIX 24 AC6 ASP A 427 HIS A 445 1 19 HELIX 25 AC7 SER A 450 CYS A 465 1 16 HELIX 26 AC8 THR A 470 LYS A 495 1 26 HELIX 27 AC9 VAL A 537 PHE A 548 1 12 HELIX 28 AD1 THR A 613 ILE A 614 5 2 HELIX 29 AD2 SER A 616 ASP A 619 5 4 HELIX 30 AD3 PRO A 662 ARG A 669 1 8 HELIX 31 AD4 SER A 670 ARG A 691 1 22 HELIX 32 AD5 ARG A 695 ILE A 700 1 6 HELIX 33 AD6 GLN A 701 SER A 707 1 7 HELIX 34 AD7 SER A 714 ILE A 726 1 13 HELIX 35 AD8 LEU V 158 ARG V 167 1 10 HELIX 36 AD9 CYS R 53 GLN R 60 1 8 HELIX 37 AE1 PHE R 81 ARG R 91 1 11 HELIX 38 AE2 THR B 23 LYS B 36 1 14 HELIX 39 AE3 PRO B 38 ASP B 40 5 3 HELIX 40 AE4 LYS C 32 LEU C 37 1 6 HELIX 41 AE5 SER C 39 SER C 47 1 9 HELIX 42 AE6 PRO C 66 TYR C 83 1 18 HELIX 43 AE7 ILE C 99 LEU C 110 1 12 SHEET 1 AA1 3 PHE A 507 LEU A 512 0 SHEET 2 AA1 3 TRP R 27 ALA R 34 1 O ALA R 31 N TYR A 510 SHEET 3 AA1 3 LYS A 552 LEU A 556 -1 N LYS A 552 O ALA R 34 SHEET 1 AA2 2 ILE A 731 GLU A 732 0 SHEET 2 AA2 2 SER A 742 TYR A 743 -1 O SER A 742 N GLU A 732 SHEET 1 AA3 2 VAL R 70 ALA R 71 0 SHEET 2 AA3 2 PHE R 79 HIS R 80 -1 O PHE R 79 N ALA R 71 SHEET 1 AA4 2 GLN B 42 ARG B 43 0 SHEET 2 AA4 2 ALA B 78 PHE B 79 -1 O ALA B 78 N ARG B 43 SHEET 1 AA5 3 ILE C 30 VAL C 31 0 SHEET 2 AA5 3 VAL C 19 LEU C 21 -1 N VAL C 19 O VAL C 31 SHEET 3 AA5 3 GLU C 59 VAL C 60 1 O VAL C 60 N LYS C 20 LINK SG CYS R 45 ZN ZN R 201 1555 1555 2.68 LINK SG CYS R 53 ZN ZN R 202 1555 1555 2.45 LINK SG CYS R 56 ZN ZN R 202 1555 1555 2.36 LINK SG CYS R 75 ZN ZN R 203 1555 1555 2.52 LINK NE2 HIS R 82 ZN ZN R 202 1555 1555 2.32 LINK SG CYS R 83 ZN ZN R 201 1555 1555 2.88 CISPEP 1 TYR A 49 PRO A 50 0 -25.53 CISPEP 2 GLU A 174 ASP A 175 0 0.44 CISPEP 3 GLY A 360 ASP A 361 0 -5.10 CISPEP 4 SER A 383 VAL A 384 0 -1.48 CISPEP 5 VAL A 384 CYS A 385 0 3.51 CISPEP 6 VAL R 38 VAL R 39 0 10.13 SITE 1 AC1 4 CYS R 42 CYS R 45 HIS R 80 CYS R 83 SITE 1 AC2 4 CYS R 53 CYS R 56 CYS R 68 HIS R 82 SITE 1 AC3 4 CYS R 75 HIS R 77 CYS R 94 ASP R 97 CRYST1 86.038 190.962 238.885 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011623 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005237 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004186 0.00000