PDB Short entry for 5OQT HEADER TRANSPORT PROTEIN 14-AUG-17 5OQT TITLE CRYSTAL STRUCTURE OF A BACTERIAL CATIONIC AMINO ACID TRANSPORTER (CAT) TITLE 2 HOMOLOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINO ACID TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: UNCHARACTERIZED PROTEIN YNEM; COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS KAUSTOPHILUS (STRAIN HTA426); SOURCE 3 ORGANISM_TAXID: 235909; SOURCE 4 GENE: GK0930; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: C43; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 10 ORGANISM_TAXID: 83333; SOURCE 11 GENE: YNEM, B4599, JW1527.1; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_VARIANT: C43 KEYWDS SLC7, APC, LEUT FOLD, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.E.J.JUNGNICKEL,S.NEWSTEAD REVDAT 5 17-JAN-24 5OQT 1 REMARK REVDAT 4 25-APR-18 5OQT 1 REMARK REVDAT 3 28-FEB-18 5OQT 1 REMARK REVDAT 2 21-FEB-18 5OQT 1 JRNL REVDAT 1 14-FEB-18 5OQT 0 JRNL AUTH K.E.J.JUNGNICKEL,J.L.PARKER,S.NEWSTEAD JRNL TITL STRUCTURAL BASIS FOR AMINO ACID TRANSPORT BY THE CAT FAMILY JRNL TITL 2 OF SLC7 TRANSPORTERS. JRNL REF NAT COMMUN V. 9 550 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29416041 JRNL DOI 10.1038/S41467-018-03066-6 REMARK 2 REMARK 2 RESOLUTION. 2.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 18190 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 901 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.86 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.03 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.18 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2855 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2667 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2717 REMARK 3 BIN R VALUE (WORKING SET) : 0.2641 REMARK 3 BIN FREE R VALUE : 0.3163 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.83 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 138 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3685 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 334 REMARK 3 SOLVENT ATOMS : 108 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -17.12670 REMARK 3 B22 (A**2) : 7.57510 REMARK 3 B33 (A**2) : 9.55160 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.456 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 1.044 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.366 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.965 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.370 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.905 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4102 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5508 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1461 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 45 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 597 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4102 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 526 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4965 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.10 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.38 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.28 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -12.4873 -3.6368 25.1452 REMARK 3 T TENSOR REMARK 3 T11: 0.2198 T22: -0.0852 REMARK 3 T33: -0.3603 T12: -0.0733 REMARK 3 T13: -0.0194 T23: 0.0711 REMARK 3 L TENSOR REMARK 3 L11: 1.2666 L22: 2.0839 REMARK 3 L33: 2.3701 L12: 0.0471 REMARK 3 L13: 0.2600 L23: 0.4373 REMARK 3 S TENSOR REMARK 3 S11: 0.1187 S12: 0.0227 S13: -0.0400 REMARK 3 S21: -0.2390 S22: -0.0139 S23: 0.1435 REMARK 3 S31: 0.1775 S32: -0.3613 S33: -0.1048 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OQT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006217. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18307 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.860 REMARK 200 RESOLUTION RANGE LOW (A) : 64.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.15230 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 1.78900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3GIA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28-34 % PEG 400, 0.1 M SODIUM ACETATE REMARK 280 PH 4.0, 0.1 M POTASSIUM FLUORIDE, CONTAINING 10 MM OF THE AMINO REMARK 280 ACID LIGAND., LIPIDIC CUBIC PHASE, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.46150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.87200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.57400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.87200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.46150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.57400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 PHE A 138 REMARK 465 GLY A 139 REMARK 465 ILE A 140 REMARK 465 GLU A 462 REMARK 465 MET A 463 REMARK 465 ALA A 464 REMARK 465 ARG A 465 REMARK 465 THR A 466 REMARK 465 GLU A 467 REMARK 465 GLU A 468 REMARK 465 LYS A 469 REMARK 465 ALA A 470 REMARK 465 GLY A 471 REMARK 465 LYS C 28 REMARK 465 TRP C 29 REMARK 465 ASP C 30 REMARK 465 ASP C 31 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 4 33.14 -98.99 REMARK 500 ARG A 5 98.15 -66.96 REMARK 500 GLU A 26 -43.32 -142.76 REMARK 500 ALA A 60 5.92 -67.82 REMARK 500 VAL A 86 75.81 -116.05 REMARK 500 SER A 91 -159.64 -111.41 REMARK 500 ALA A 92 -41.75 -25.51 REMARK 500 PRO A 152 -132.41 -107.63 REMARK 500 THR A 156 144.14 -37.60 REMARK 500 MET A 215 71.01 -114.32 REMARK 500 ASN A 248 62.76 61.57 REMARK 500 GLN A 299 57.29 -106.41 REMARK 500 VAL A 413 -62.35 -27.20 REMARK 500 LYS A 456 74.64 -113.81 REMARK 500 SER A 458 42.67 -87.39 REMARK 500 GLU A 459 -2.35 -159.05 REMARK 500 LEU C 2 -63.22 68.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 685 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 686 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 687 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A 688 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A 689 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A 690 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH A 691 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A 692 DISTANCE = 6.79 ANGSTROMS REMARK 525 HOH A 693 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH A 694 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH A 695 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH A 696 DISTANCE = 7.32 ANGSTROMS REMARK 525 HOH A 697 DISTANCE = 7.95 ANGSTROMS REMARK 525 HOH A 698 DISTANCE = 8.03 ANGSTROMS REMARK 525 HOH A 699 DISTANCE = 8.30 ANGSTROMS REMARK 525 HOH A 700 DISTANCE = 8.32 ANGSTROMS REMARK 525 HOH A 701 DISTANCE = 8.42 ANGSTROMS REMARK 525 HOH A 702 DISTANCE = 8.89 ANGSTROMS REMARK 525 HOH A 703 DISTANCE = 9.34 ANGSTROMS REMARK 525 HOH A 704 DISTANCE = 9.40 ANGSTROMS REMARK 525 HOH A 705 DISTANCE = 12.29 ANGSTROMS REMARK 525 HOH A 706 DISTANCE = 14.16 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 505 REMARK 610 OLC A 508 REMARK 610 ALA A 515 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ALA A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC C 102 DBREF 5OQT A 1 471 UNP Q5L1G5 Q5L1G5_GEOKA 1 471 DBREF 5OQT C 1 31 UNP A5A616 YNEM_ECOLI 1 31 SEQRES 1 A 471 MET ASN LEU PHE ARG LYS LYS PRO ILE GLN LEU LEU MET SEQRES 2 A 471 LYS GLU SER GLY ALA LYS GLY ALA SER LEU ARG LYS GLU SEQRES 3 A 471 LEU GLY ALA PHE ASP LEU THR MET LEU GLY ILE GLY ALA SEQRES 4 A 471 ILE ILE GLY THR GLY ILE PHE VAL LEU THR GLY VAL ALA SEQRES 5 A 471 ALA ALA GLU HIS ALA GLY PRO ALA LEU VAL LEU SER PHE SEQRES 6 A 471 ILE LEU SER GLY LEU ALA CYS VAL PHE ALA ALA LEU CYS SEQRES 7 A 471 TYR ALA GLU PHE ALA SER THR VAL PRO VAL SER GLY SER SEQRES 8 A 471 ALA TYR THR TYR SER TYR ALA THR PHE GLY GLU LEU ILE SEQRES 9 A 471 ALA TRP ILE LEU GLY TRP ASP LEU ILE LEU GLU TYR GLY SEQRES 10 A 471 VAL ALA SER SER ALA VAL ALA VAL GLY TRP SER GLY TYR SEQRES 11 A 471 PHE GLN GLY LEU LEU SER GLY PHE GLY ILE GLU LEU PRO SEQRES 12 A 471 LYS ALA LEU THR SER ALA TYR ASP PRO ALA LYS GLY THR SEQRES 13 A 471 PHE ILE ASP LEU PRO ALA ILE ILE ILE VAL LEU PHE ILE SEQRES 14 A 471 THR PHE LEU LEU ASN LEU GLY ALA LYS LYS SER ALA ARG SEQRES 15 A 471 PHE ASN ALA VAL ILE VAL ALA ILE LYS VAL ALA VAL VAL SEQRES 16 A 471 LEU LEU PHE LEU ALA VAL GLY VAL TRP TYR VAL LYS PRO SEQRES 17 A 471 GLU ASN TRP THR PRO PHE MET PRO TYR GLY PHE SER GLY SEQRES 18 A 471 VAL ALA THR GLY ALA ALA THR VAL PHE PHE ALA TYR ILE SEQRES 19 A 471 GLY PHE ASP ALA VAL SER THR ALA ALA GLU GLU VAL ARG SEQRES 20 A 471 ASN PRO GLN ARG ASP MET PRO ILE GLY ILE ILE VAL SER SEQRES 21 A 471 LEU LEU VAL CYS THR LEU LEU TYR ILE ALA VAL SER LEU SEQRES 22 A 471 VAL LEU THR GLY ILE VAL PRO TYR GLU GLN LEU ASN VAL SEQRES 23 A 471 LYS ASN PRO VAL ALA PHE ALA LEU ASN TYR ILE HIS GLN SEQRES 24 A 471 ASP TRP VAL ALA GLY PHE ILE SER LEU GLY ALA ILE ALA SEQRES 25 A 471 GLY ILE THR THR VAL LEU LEU VAL MET MET TYR GLY GLN SEQRES 26 A 471 THR ARG LEU PHE TYR ALA ILE SER ARG ASP GLY LEU LEU SEQRES 27 A 471 PRO LYS VAL PHE ALA ARG ILE SER PRO THR ARG GLN VAL SEQRES 28 A 471 PRO TYR VAL ASN THR TRP LEU THR GLY ALA ALA VAL ALA SEQRES 29 A 471 VAL PHE ALA GLY ILE ILE PRO LEU ASN LYS LEU ALA GLU SEQRES 30 A 471 LEU THR ASN ILE GLY THR LEU PHE ALA PHE ILE THR VAL SEQRES 31 A 471 SER ILE GLY VAL LEU VAL LEU ARG LYS THR GLN PRO ASP SEQRES 32 A 471 LEU LYS ARG ALA PHE ARG VAL PRO PHE VAL PRO VAL VAL SEQRES 33 A 471 PRO ILE LEU ALA VAL LEU PHE CYS GLY TYR LEU VAL LEU SEQRES 34 A 471 GLN LEU PRO ALA MET THR TRP ILE GLY PHE VAL SER TRP SEQRES 35 A 471 LEU LEU ILE GLY LEU VAL ILE TYR PHE ILE TYR GLY ARG SEQRES 36 A 471 LYS HIS SER GLU LEU ASN GLU MET ALA ARG THR GLU GLU SEQRES 37 A 471 LYS ALA GLY SEQRES 1 C 31 MET LEU GLY ASN MET ASN VAL PHE MET ALA VAL LEU GLY SEQRES 2 C 31 ILE ILE LEU PHE SER GLY PHE LEU ALA ALA TYR PHE SER SEQRES 3 C 31 HIS LYS TRP ASP ASP HET OLC A 501 25 HET OLC A 502 25 HET OLC A 503 25 HET OLC A 504 25 HET OLC A 505 11 HET OLC A 506 25 HET OLC A 507 25 HET OLC A 508 10 HET OLC A 509 25 HET OLC A 510 25 HET OLC A 511 25 HET OLC A 512 25 HET ACT A 513 4 HET CL A 514 1 HET ALA A 515 5 HET CLR C 101 28 HET OLC C 102 25 HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM ACT ACETATE ION HETNAM CL CHLORIDE ION HETNAM ALA ALANINE HETNAM CLR CHOLESTEROL HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 3 OLC 13(C21 H40 O4) FORMUL 15 ACT C2 H3 O2 1- FORMUL 16 CL CL 1- FORMUL 17 ALA C3 H7 N O2 FORMUL 18 CLR C27 H46 O FORMUL 20 HOH *108(H2 O) HELIX 1 AA1 PRO A 8 GLY A 20 1 13 HELIX 2 AA2 GLY A 28 ILE A 41 1 14 HELIX 3 AA3 GLY A 42 VAL A 47 1 6 HELIX 4 AA4 VAL A 47 HIS A 56 1 10 HELIX 5 AA5 ALA A 57 PRO A 59 5 3 HELIX 6 AA6 ALA A 60 VAL A 86 1 27 HELIX 7 AA7 SER A 91 PHE A 100 1 10 HELIX 8 AA8 GLY A 101 SER A 136 1 36 HELIX 9 AA9 LYS A 144 SER A 148 5 5 HELIX 10 AB1 ASP A 159 LEU A 175 1 17 HELIX 11 AB2 SER A 180 VAL A 203 1 24 HELIX 12 AB3 TRP A 204 VAL A 206 5 3 HELIX 13 AB4 LYS A 207 TRP A 211 5 5 HELIX 14 AB5 TYR A 217 VAL A 229 1 13 HELIX 15 AB6 PHE A 230 ILE A 234 5 5 HELIX 16 AB7 GLY A 235 VAL A 246 5 12 HELIX 17 AB8 ASN A 248 VAL A 279 1 32 HELIX 18 AB9 PRO A 280 LEU A 284 5 5 HELIX 19 AC1 ASN A 288 ILE A 297 1 10 HELIX 20 AC2 GLN A 299 ASP A 335 1 37 HELIX 21 AC3 ASN A 355 ILE A 370 1 16 HELIX 22 AC4 PRO A 371 THR A 400 1 30 HELIX 23 AC5 PRO A 414 LEU A 429 1 16 HELIX 24 AC6 GLN A 430 LEU A 431 5 2 HELIX 25 AC7 PRO A 432 ALA A 433 5 2 HELIX 26 AC8 MET A 434 TYR A 453 1 20 HELIX 27 AC9 LEU C 2 PHE C 25 1 24 SHEET 1 AA1 2 VAL A 341 SER A 346 0 SHEET 2 AA1 2 ARG A 349 TYR A 353 -1 O TYR A 353 N VAL A 341 SITE 1 AC1 8 PHE A 4 LEU A 199 VAL A 203 TRP A 204 SITE 2 AC1 8 VAL A 206 LYS A 207 OLC A 502 OLC A 512 SITE 1 AC2 6 PHE A 4 PHE A 100 TRP A 204 PHE A 385 SITE 2 AC2 6 THR A 389 OLC A 501 SITE 1 AC3 5 MET A 34 ILE A 255 OLC A 510 OLC A 512 SITE 2 AC3 5 PHE C 8 SITE 1 AC4 5 ALA A 177 LYS A 179 VAL A 320 OLC A 509 SITE 2 AC4 5 OLC A 511 SITE 1 AC5 10 PHE A 329 SER A 333 PRO A 339 VAL A 354 SITE 2 AC5 10 ASN A 355 LEU A 358 THR A 359 PHE A 366 SITE 3 AC5 10 GLY A 438 OLC A 508 SITE 1 AC6 9 SER A 220 LEU A 429 GLN A 430 LEU A 431 SITE 2 AC6 9 ALA A 433 TRP A 436 OLC A 510 OLC A 512 SITE 3 AC6 9 HOH A 610 SITE 1 AC7 2 PHE A 366 OLC A 506 SITE 1 AC8 9 LEU A 35 LYS A 179 SER A 180 ASN A 184 SITE 2 AC8 9 ILE A 187 THR A 316 LEU A 319 OLC A 504 SITE 3 AC8 9 HOH A 633 SITE 1 AC9 3 OLC A 503 OLC A 507 OLC A 512 SITE 1 AD1 2 LEU A 175 OLC A 504 SITE 1 AD2 8 LEU A 429 GLN A 430 OLC A 501 OLC A 503 SITE 2 AD2 8 OLC A 507 OLC A 510 HOH A 611 PHE C 8 SITE 1 AD3 2 GLU A 55 HIS A 56 SITE 1 AD4 3 HIS A 298 SER A 458 HIS C 27 SITE 1 AD5 8 ILE A 40 GLY A 42 THR A 43 GLY A 44 SITE 2 AD5 8 PHE A 231 ALA A 232 ILE A 234 HOH A 615 SITE 1 AD6 4 TYR A 205 ILE A 392 PHE C 20 TYR C 24 SITE 1 AD7 3 PHE A 219 ASN C 6 MET C 9 CRYST1 76.923 83.148 119.744 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012027 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008351 0.00000