PDB Short entry for 5UOR HEADER TRANSFERASE/TRANSFERASE INHIBITOR 01-FEB-17 5UOR TITLE STRUCTURE-BASED DESIGN OF ASK1 INHIBITORS AS POTENTIAL FIRST-IN-CLASS TITLE 2 AGENTS FOR HEART FAILURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 670-939; COMPND 5 SYNONYM: APOPTOSIS SIGNAL-REGULATING KINASE 1,ASK-1,MAPK/ERK KINASE COMPND 6 KINASE 5,MEKK 5; COMPND 7 EC: 2.7.11.25; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP3K5, ASK1, MAPKKK5, MEKK5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEH8 KEYWDS TRANSFERASE, METAL-BINDING, APOPTOSIS, TRANSFERASE-TRANSFERASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.R.DOUGAN REVDAT 3 06-MAR-24 5UOR 1 REMARK REVDAT 2 22-NOV-17 5UOR 1 REMARK REVDAT 1 07-JUN-17 5UOR 0 JRNL AUTH M.LANIER,J.PICKENS,S.V.BIGI,E.L.BRADSHAW-PIERCE,A.CHAMBERS, JRNL AUTH 2 Z.S.CHERUVALLATH,D.COLE,D.R.DOUGAN,J.ERMOLIEFF,T.GIBSON, JRNL AUTH 3 P.HALKOWYCZ,A.HIROKAWA,A.IVETAC,J.MIURA,E.NUNEZ,M.SABAT, JRNL AUTH 4 J.TYHONAS,H.WANG,X.WANG,S.SWANN JRNL TITL STRUCTURE-BASED DESIGN OF ASK1 INHIBITORS AS POTENTIAL JRNL TITL 2 AGENTS FOR HEART FAILURE. JRNL REF ACS MED CHEM LETT V. 8 316 2017 JRNL REFN ISSN 1948-5875 JRNL PMID 28337323 JRNL DOI 10.1021/ACSMEDCHEMLETT.6B00481 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0025 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20609 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1112 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1473 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4078 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.46000 REMARK 3 B22 (A**2) : 1.46000 REMARK 3 B33 (A**2) : -2.19000 REMARK 3 B12 (A**2) : 0.73000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.606 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.339 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.260 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.431 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.902 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4250 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5733 ; 1.379 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 505 ; 5.844 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;37.530 ;24.508 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 752 ;15.975 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;17.130 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 607 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3263 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 671 A 704 REMARK 3 ORIGIN FOR THE GROUP (A): 14.2144 63.1949 -13.5497 REMARK 3 T TENSOR REMARK 3 T11: 0.4804 T22: 0.2071 REMARK 3 T33: 0.2734 T12: 0.0825 REMARK 3 T13: 0.0174 T23: 0.0748 REMARK 3 L TENSOR REMARK 3 L11: 1.1351 L22: 0.0444 REMARK 3 L33: 2.1230 L12: 0.0531 REMARK 3 L13: -0.3645 L23: 0.1983 REMARK 3 S TENSOR REMARK 3 S11: 0.1585 S12: 0.0092 S13: 0.0929 REMARK 3 S21: -0.0527 S22: -0.0672 S23: -0.0369 REMARK 3 S31: 0.0932 S32: -0.1570 S33: -0.0913 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 705 A 768 REMARK 3 ORIGIN FOR THE GROUP (A): 6.6253 54.3363 -12.8731 REMARK 3 T TENSOR REMARK 3 T11: 0.3616 T22: 0.2610 REMARK 3 T33: 0.2727 T12: -0.0727 REMARK 3 T13: -0.0849 T23: 0.0417 REMARK 3 L TENSOR REMARK 3 L11: 0.0616 L22: 1.6038 REMARK 3 L33: 1.9401 L12: 0.1656 REMARK 3 L13: -0.1810 L23: -0.0625 REMARK 3 S TENSOR REMARK 3 S11: 0.0483 S12: -0.0183 S13: -0.0201 REMARK 3 S21: -0.2526 S22: 0.0195 S23: -0.0333 REMARK 3 S31: 0.1833 S32: -0.3870 S33: -0.0678 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 769 A 796 REMARK 3 ORIGIN FOR THE GROUP (A): 1.6172 52.9948 8.8545 REMARK 3 T TENSOR REMARK 3 T11: 0.2666 T22: 0.3820 REMARK 3 T33: 0.2685 T12: -0.2239 REMARK 3 T13: 0.0266 T23: 0.0697 REMARK 3 L TENSOR REMARK 3 L11: 0.0532 L22: 3.2250 REMARK 3 L33: 2.6907 L12: -0.2681 REMARK 3 L13: 0.2934 L23: -0.0628 REMARK 3 S TENSOR REMARK 3 S11: -0.0541 S12: -0.0672 S13: -0.0084 REMARK 3 S21: 0.5500 S22: -0.0298 S23: 0.2126 REMARK 3 S31: 0.1179 S32: -0.5920 S33: 0.0840 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 797 A 820 REMARK 3 ORIGIN FOR THE GROUP (A): 3.1777 52.3427 -0.6885 REMARK 3 T TENSOR REMARK 3 T11: 0.1745 T22: 0.4374 REMARK 3 T33: 0.2710 T12: -0.2020 REMARK 3 T13: -0.0731 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 0.2856 L22: 2.1953 REMARK 3 L33: 2.2325 L12: 0.7912 REMARK 3 L13: -0.7881 L23: -2.1854 REMARK 3 S TENSOR REMARK 3 S11: 0.0132 S12: 0.0144 S13: -0.0026 REMARK 3 S21: 0.0694 S22: 0.0174 S23: 0.0075 REMARK 3 S31: 0.0083 S32: -0.1911 S33: -0.0306 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 821 A 876 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2416 40.2928 0.5253 REMARK 3 T TENSOR REMARK 3 T11: 0.6835 T22: 0.1799 REMARK 3 T33: 0.2245 T12: -0.3028 REMARK 3 T13: -0.1319 T23: 0.0918 REMARK 3 L TENSOR REMARK 3 L11: 0.2487 L22: 1.0969 REMARK 3 L33: 0.0249 L12: 0.4916 REMARK 3 L13: -0.0095 L23: 0.0267 REMARK 3 S TENSOR REMARK 3 S11: -0.0283 S12: 0.1102 S13: 0.0641 REMARK 3 S21: 0.2465 S22: 0.0852 S23: 0.1423 REMARK 3 S31: 0.1281 S32: -0.0605 S33: -0.0569 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 877 A 939 REMARK 3 ORIGIN FOR THE GROUP (A): 3.5173 39.4279 12.8159 REMARK 3 T TENSOR REMARK 3 T11: 1.1205 T22: 0.1784 REMARK 3 T33: 0.2309 T12: -0.3401 REMARK 3 T13: -0.0806 T23: 0.1521 REMARK 3 L TENSOR REMARK 3 L11: 0.1785 L22: 3.9996 REMARK 3 L33: 4.2209 L12: -0.6415 REMARK 3 L13: 0.5459 L23: 0.0134 REMARK 3 S TENSOR REMARK 3 S11: 0.1456 S12: -0.0241 S13: 0.0159 REMARK 3 S21: 1.1778 S22: -0.1214 S23: -0.0055 REMARK 3 S31: 1.8080 S32: -0.6079 S33: -0.0242 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 670 B 704 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1839 1.0850 20.9696 REMARK 3 T TENSOR REMARK 3 T11: 0.4253 T22: 0.1955 REMARK 3 T33: 0.2685 T12: -0.1055 REMARK 3 T13: -0.0061 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.8283 L22: 0.0183 REMARK 3 L33: 2.4112 L12: 0.0741 REMARK 3 L13: 0.0660 L23: -0.0026 REMARK 3 S TENSOR REMARK 3 S11: 0.0761 S12: -0.0475 S13: -0.0385 REMARK 3 S21: -0.0625 S22: 0.0286 S23: 0.0075 REMARK 3 S31: -0.0242 S32: -0.1181 S33: -0.1047 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 705 B 755 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2504 1.8967 15.0053 REMARK 3 T TENSOR REMARK 3 T11: 0.3459 T22: 0.2819 REMARK 3 T33: 0.2390 T12: -0.0867 REMARK 3 T13: 0.0811 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 0.7199 L22: 1.1066 REMARK 3 L33: 2.6296 L12: 0.6165 REMARK 3 L13: 0.6704 L23: 1.6431 REMARK 3 S TENSOR REMARK 3 S11: -0.0869 S12: 0.2327 S13: -0.1858 REMARK 3 S21: -0.0190 S22: 0.1811 S23: -0.1307 REMARK 3 S31: 0.1189 S32: 0.1842 S33: -0.0942 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 756 B 940 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7973 17.9571 29.2375 REMARK 3 T TENSOR REMARK 3 T11: 0.2954 T22: 0.3159 REMARK 3 T33: 0.2304 T12: -0.2409 REMARK 3 T13: 0.0134 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.5261 L22: 1.6864 REMARK 3 L33: 2.2371 L12: 0.2058 REMARK 3 L13: 0.7426 L23: 0.3113 REMARK 3 S TENSOR REMARK 3 S11: -0.1390 S12: 0.1199 S13: -0.1228 REMARK 3 S21: -0.1012 S22: 0.0629 S23: 0.0716 REMARK 3 S31: -0.3546 S32: 0.5928 S33: 0.0762 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5UOR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9765 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21840 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.79700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% POLYETHYLENE GLYCOL 2000 MME , 0.1M REMARK 280 MES, PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 287.77267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 143.88633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 215.82950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 71.94317 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 359.71583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 287.77267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 143.88633 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 71.94317 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 215.82950 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 359.71583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 670 REMARK 465 ALA A 830 REMARK 465 GLY A 831 REMARK 465 ILE A 832 REMARK 465 ASN A 833 REMARK 465 PRO A 834 REMARK 465 CYS A 835 REMARK 465 THR A 836 REMARK 465 GLU A 837 REMARK 465 THR A 838 REMARK 465 LYS A 853 REMARK 465 GLY A 854 REMARK 465 PRO A 855 REMARK 465 ARG A 856 REMARK 465 GLY A 857 REMARK 465 LEU A 884 REMARK 465 GLY A 885 REMARK 465 GLU A 886 REMARK 465 PRO A 887 REMARK 465 GLN A 888 REMARK 465 ALA A 889 REMARK 465 ALA B 830 REMARK 465 GLY B 831 REMARK 465 ILE B 832 REMARK 465 ASN B 833 REMARK 465 PRO B 834 REMARK 465 CYS B 835 REMARK 465 THR B 836 REMARK 465 GLU B 837 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 702 3.89 -153.11 REMARK 500 HIS A 734 138.74 -174.48 REMARK 500 GLU A 746 140.93 -178.60 REMARK 500 ASN A 747 29.35 42.25 REMARK 500 ASP A 803 44.92 -162.20 REMARK 500 ASP A 822 97.84 64.32 REMARK 500 PHE A 881 78.66 59.78 REMARK 500 ASN B 702 3.20 -156.41 REMARK 500 ARG B 714 66.12 -117.93 REMARK 500 ASN B 747 32.25 37.11 REMARK 500 LYS B 769 -47.96 -132.63 REMARK 500 ASP B 803 46.44 -150.77 REMARK 500 ASP B 822 82.47 58.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1124 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH A1125 DISTANCE = 7.16 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8GV A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8GV B 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UOX RELATED DB: PDB REMARK 900 RELATED ID: 5UP3 RELATED DB: PDB DBREF 5UOR A 670 939 UNP Q99683 M3K5_HUMAN 670 939 DBREF 5UOR B 670 939 UNP Q99683 M3K5_HUMAN 670 939 SEQRES 1 A 270 LEU LEU GLU TYR ASP TYR GLU TYR ASP GLU ASN GLY ASP SEQRES 2 A 270 ARG VAL VAL LEU GLY LYS GLY THR TYR GLY ILE VAL TYR SEQRES 3 A 270 ALA GLY ARG ASP LEU SER ASN GLN VAL ARG ILE ALA ILE SEQRES 4 A 270 LYS GLU ILE PRO GLU ARG ASP SER ARG TYR SER GLN PRO SEQRES 5 A 270 LEU HIS GLU GLU ILE ALA LEU HIS LYS HIS LEU LYS HIS SEQRES 6 A 270 LYS ASN ILE VAL GLN TYR LEU GLY SER PHE SER GLU ASN SEQRES 7 A 270 GLY PHE ILE LYS ILE PHE MET GLU GLN VAL PRO GLY GLY SEQRES 8 A 270 SER LEU SER ALA LEU LEU ARG SER LYS TRP GLY PRO LEU SEQRES 9 A 270 LYS ASP ASN GLU GLN THR ILE GLY PHE TYR THR LYS GLN SEQRES 10 A 270 ILE LEU GLU GLY LEU LYS TYR LEU HIS ASP ASN GLN ILE SEQRES 11 A 270 VAL HIS ARG ASP ILE LYS GLY ASP ASN VAL LEU ILE ASN SEQRES 12 A 270 THR TYR SER GLY VAL LEU LYS ILE SER ASP PHE GLY THR SEQRES 13 A 270 SER LYS ARG LEU ALA GLY ILE ASN PRO CYS THR GLU THR SEQRES 14 A 270 PHE THR GLY THR LEU GLN TYR MET ALA PRO GLU ILE ILE SEQRES 15 A 270 ASP LYS GLY PRO ARG GLY TYR GLY LYS ALA ALA ASP ILE SEQRES 16 A 270 TRP SER LEU GLY CYS THR ILE ILE GLU MET ALA THR GLY SEQRES 17 A 270 LYS PRO PRO PHE TYR GLU LEU GLY GLU PRO GLN ALA ALA SEQRES 18 A 270 MET PHE LYS VAL GLY MET PHE LYS VAL HIS PRO GLU ILE SEQRES 19 A 270 PRO GLU SER MET SER ALA GLU ALA LYS ALA PHE ILE LEU SEQRES 20 A 270 LYS CYS PHE GLU PRO ASP PRO ASP LYS ARG ALA CYS ALA SEQRES 21 A 270 ASN ASP LEU LEU VAL ASP GLU PHE LEU LYS SEQRES 1 B 270 LEU LEU GLU TYR ASP TYR GLU TYR ASP GLU ASN GLY ASP SEQRES 2 B 270 ARG VAL VAL LEU GLY LYS GLY THR TYR GLY ILE VAL TYR SEQRES 3 B 270 ALA GLY ARG ASP LEU SER ASN GLN VAL ARG ILE ALA ILE SEQRES 4 B 270 LYS GLU ILE PRO GLU ARG ASP SER ARG TYR SER GLN PRO SEQRES 5 B 270 LEU HIS GLU GLU ILE ALA LEU HIS LYS HIS LEU LYS HIS SEQRES 6 B 270 LYS ASN ILE VAL GLN TYR LEU GLY SER PHE SER GLU ASN SEQRES 7 B 270 GLY PHE ILE LYS ILE PHE MET GLU GLN VAL PRO GLY GLY SEQRES 8 B 270 SER LEU SER ALA LEU LEU ARG SER LYS TRP GLY PRO LEU SEQRES 9 B 270 LYS ASP ASN GLU GLN THR ILE GLY PHE TYR THR LYS GLN SEQRES 10 B 270 ILE LEU GLU GLY LEU LYS TYR LEU HIS ASP ASN GLN ILE SEQRES 11 B 270 VAL HIS ARG ASP ILE LYS GLY ASP ASN VAL LEU ILE ASN SEQRES 12 B 270 THR TYR SER GLY VAL LEU LYS ILE SER ASP PHE GLY THR SEQRES 13 B 270 SER LYS ARG LEU ALA GLY ILE ASN PRO CYS THR GLU THR SEQRES 14 B 270 PHE THR GLY THR LEU GLN TYR MET ALA PRO GLU ILE ILE SEQRES 15 B 270 ASP LYS GLY PRO ARG GLY TYR GLY LYS ALA ALA ASP ILE SEQRES 16 B 270 TRP SER LEU GLY CYS THR ILE ILE GLU MET ALA THR GLY SEQRES 17 B 270 LYS PRO PRO PHE TYR GLU LEU GLY GLU PRO GLN ALA ALA SEQRES 18 B 270 MET PHE LYS VAL GLY MET PHE LYS VAL HIS PRO GLU ILE SEQRES 19 B 270 PRO GLU SER MET SER ALA GLU ALA LYS ALA PHE ILE LEU SEQRES 20 B 270 LYS CYS PHE GLU PRO ASP PRO ASP LYS ARG ALA CYS ALA SEQRES 21 B 270 ASN ASP LEU LEU VAL ASP GLU PHE LEU LYS HET SO4 A1001 5 HET 8GV A1002 33 HET SO4 B1001 5 HET 8GV B1002 33 HETNAM SO4 SULFATE ION HETNAM 8GV 6-{[(2S)-4-METHYLMORPHOLIN-2-YL]METHOXY}-2-{6-[4- HETNAM 2 8GV (PROPAN-2-YL)-4H-1,2,4-TRIAZOL-3-YL]PYRIDIN-2-YL}-2,3- HETNAM 3 8GV DIHYDRO-1H-ISOINDOL-1-ONE FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 8GV 2(C24 H28 N6 O3) FORMUL 7 HOH *75(H2 O) HELIX 1 AA1 ASP A 715 LYS A 730 1 16 HELIX 2 AA2 SER A 761 LYS A 769 1 9 HELIX 3 AA3 ASN A 776 ASP A 796 1 21 HELIX 4 AA4 THR A 842 MET A 846 5 5 HELIX 5 AA5 ALA A 847 ASP A 852 1 6 HELIX 6 AA6 GLY A 859 GLY A 877 1 19 HELIX 7 AA7 MET A 891 LYS A 898 1 8 HELIX 8 AA8 SER A 908 CYS A 918 1 11 HELIX 9 AA9 CYS A 928 ASP A 935 1 8 HELIX 10 AB1 TYR B 718 LYS B 730 1 13 HELIX 11 AB2 SER B 761 LYS B 769 1 9 HELIX 12 AB3 ASN B 776 ASN B 797 1 22 HELIX 13 AB4 ASP B 822 SER B 826 5 5 HELIX 14 AB5 THR B 842 MET B 846 5 5 HELIX 15 AB6 ALA B 847 GLY B 854 1 8 HELIX 16 AB7 PRO B 855 TYR B 858 5 4 HELIX 17 AB8 GLY B 859 GLY B 877 1 19 HELIX 18 AB9 PHE B 881 GLY B 885 5 5 HELIX 19 AC1 GLU B 886 LYS B 898 1 13 HELIX 20 AC2 SER B 908 PHE B 919 1 12 HELIX 21 AC3 CYS B 928 ASP B 935 1 8 HELIX 22 AC4 GLU B 936 LYS B 939 5 4 SHEET 1 AA1 3 TYR A 673 TYR A 675 0 SHEET 2 AA1 3 ILE A 693 ASP A 699 -1 O ARG A 698 N ASP A 674 SHEET 3 AA1 3 VAL A 685 LYS A 688 -1 N GLY A 687 O VAL A 694 SHEET 1 AA2 5 TYR A 673 TYR A 675 0 SHEET 2 AA2 5 ILE A 693 ASP A 699 -1 O ARG A 698 N ASP A 674 SHEET 3 AA2 5 ARG A 705 PRO A 712 -1 O ILE A 708 N TYR A 695 SHEET 4 AA2 5 PHE A 749 GLU A 755 -1 O MET A 754 N ALA A 707 SHEET 5 AA2 5 TYR A 740 GLU A 746 -1 N GLY A 742 O PHE A 753 SHEET 1 AA3 2 ILE A 799 VAL A 800 0 SHEET 2 AA3 2 LYS A 827 ARG A 828 -1 O LYS A 827 N VAL A 800 SHEET 1 AA4 2 VAL A 809 ILE A 811 0 SHEET 2 AA4 2 LEU A 818 ILE A 820 -1 O LYS A 819 N LEU A 810 SHEET 1 AA5 3 TYR B 673 TYR B 675 0 SHEET 2 AA5 3 ILE B 693 ASP B 699 -1 O ARG B 698 N ASP B 674 SHEET 3 AA5 3 VAL B 685 LYS B 688 -1 N GLY B 687 O VAL B 694 SHEET 1 AA6 5 TYR B 673 TYR B 675 0 SHEET 2 AA6 5 ILE B 693 ASP B 699 -1 O ARG B 698 N ASP B 674 SHEET 3 AA6 5 ARG B 705 PRO B 712 -1 O ILE B 708 N TYR B 695 SHEET 4 AA6 5 PHE B 749 GLU B 755 -1 O MET B 754 N ALA B 707 SHEET 5 AA6 5 TYR B 740 GLU B 746 -1 N LEU B 741 O PHE B 753 SHEET 1 AA7 2 ILE B 799 VAL B 800 0 SHEET 2 AA7 2 LYS B 827 ARG B 828 -1 O LYS B 827 N VAL B 800 SHEET 1 AA8 2 VAL B 809 ILE B 811 0 SHEET 2 AA8 2 LEU B 818 ILE B 820 -1 O LYS B 819 N LEU B 810 SITE 1 AC1 2 ARG A 705 8GV A1002 SITE 1 AC2 17 LEU A 686 LYS A 688 ALA A 707 LYS A 709 SITE 2 AC2 17 VAL A 738 MET A 754 GLU A 755 GLN A 756 SITE 3 AC2 17 VAL A 757 GLY A 759 GLY A 760 ASP A 807 SITE 4 AC2 17 LEU A 810 TYR A 814 SER A 821 ASP A 822 SITE 5 AC2 17 SO4 A1001 SITE 1 AC3 3 HIS B 731 LEU B 732 ASN B 797 SITE 1 AC4 16 LEU B 686 VAL B 694 ALA B 707 LYS B 709 SITE 2 AC4 16 VAL B 738 MET B 754 GLU B 755 GLN B 756 SITE 3 AC4 16 VAL B 757 GLY B 759 ASP B 807 LEU B 810 SITE 4 AC4 16 TYR B 814 SER B 821 ASP B 822 HOH B1113 CRYST1 78.485 78.485 431.659 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012741 0.007356 0.000000 0.00000 SCALE2 0.000000 0.014712 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002317 0.00000