PDB Short entry for 5ZKP HEADER SIGNALING PROTEIN 25-MAR-18 5ZKP TITLE CRYSTAL STRUCTURE OF THE HUMAN PLATELET-ACTIVATING FACTOR RECEPTOR IN TITLE 2 COMPLEX WITH SR 27417 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLATELET-ACTIVATING FACTOR RECEPTOR,FLAVODOXIN,PLATELET- COMPND 3 ACTIVATING FACTOR RECEPTOR; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: PAFR,PAFR; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: THE FUSION PROTEIN OF PLATELET-ACTIVATING FACTOR COMPND 9 RECEPTOR (UNP RESIDUES 2-216), FLAVODOXIN (UNP RESIDUES 2-148), COMPND 10 PLATELET-ACTIVATING FACTOR RECEPTOR (UNP RESIDUES 224-316), AND TAGS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, DESULFOVIBRIO VULGARIS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 882; SOURCE 5 STRAIN: HILDENBOROUGH / ATCC 29579 / DSM 644 / NCIMB 8303; SOURCE 6 GENE: PTAFR, PAFR, DVU_2680; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS G PROTEIN-COUPLED RECEPTOR, PLATELET-ACTIVATING FACTOR RECEPTOR, KEYWDS 2 COMPLEX, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CAO,Q.ZHAO,X.C.ZHANG,B.WU REVDAT 2 22-NOV-23 5ZKP 1 REMARK REVDAT 1 20-JUN-18 5ZKP 0 JRNL AUTH C.CAO,Q.TAN,C.XU,L.HE,L.YANG,Y.ZHOU,Y.ZHOU,A.QIAO,M.LU,C.YI, JRNL AUTH 2 G.W.HAN,X.WANG,X.LI,H.YANG,Z.RAO,H.JIANG,Y.ZHAO,J.LIU, JRNL AUTH 3 R.C.STEVENS,Q.ZHAO,X.C.ZHANG,B.WU JRNL TITL STRUCTURAL BASIS FOR SIGNAL RECOGNITION AND TRANSDUCTION BY JRNL TITL 2 PLATELET-ACTIVATING-FACTOR RECEPTOR. JRNL REF NAT. STRUCT. MOL. BIOL. V. 25 488 2018 JRNL REFN ESSN 1545-9985 JRNL PMID 29808000 JRNL DOI 10.1038/S41594-018-0068-Y REMARK 2 REMARK 2 RESOLUTION. 2.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 17489 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 887 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.81 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.88 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1843 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2303 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1756 REMARK 3 BIN R VALUE (WORKING SET) : 0.2271 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.72 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 78.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 105.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.11510 REMARK 3 B22 (A**2) : 2.11510 REMARK 3 B33 (A**2) : -4.23020 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.628 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.326 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.617 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.330 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3546 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4844 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1143 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 68 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 524 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3546 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 469 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4129 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.41 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.14 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 39.1429 -10.5284 -16.3195 REMARK 3 T TENSOR REMARK 3 T11: 0.0161 T22: 0.0325 REMARK 3 T33: -0.3040 T12: -0.3182 REMARK 3 T13: -0.0220 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.4856 L22: 2.3774 REMARK 3 L33: 6.0666 L12: -0.1872 REMARK 3 L13: -0.6358 L23: 2.0032 REMARK 3 S TENSOR REMARK 3 S11: 0.3252 S12: 0.0616 S13: -0.0851 REMARK 3 S21: 0.1469 S22: -0.4022 S23: -0.1049 REMARK 3 S31: 0.0147 S32: 0.4768 S33: 0.0770 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ZKP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1300007241. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18902 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XNV, 1F4P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, PEG 400, NASCN, NA CITRATE, REMARK 280 LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 186.83333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.41667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 93.41667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 186.83333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 PRO A 1 REMARK 465 GLU A 2 REMARK 465 PRO A 3 REMARK 465 HIS A 4 REMARK 465 ASP A 5 REMARK 465 LYS A 124 REMARK 465 THR A 125 REMARK 465 ALA A 126 REMARK 465 GLN A 127 REMARK 465 ALA A 128 REMARK 465 ASN A 129 REMARK 465 THR A 130 REMARK 465 ARG A 131 REMARK 465 LYS A 132 REMARK 465 ARG A 133 REMARK 465 GLY A 134 REMARK 465 ILE A 135 REMARK 465 SER A 136 REMARK 465 LEU A 137 REMARK 465 LYS A 316 REMARK 465 GLU A 317 REMARK 465 PHE A 318 REMARK 465 LEU A 319 REMARK 465 GLU A 320 REMARK 465 VAL A 321 REMARK 465 LEU A 322 REMARK 465 PHE A 323 REMARK 465 GLN A 324 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 6 OG REMARK 470 HIS A 8 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 123 CG1 CG2 CD1 REMARK 470 LEU A 139 CG CD1 CD2 REMARK 470 VAL A 143 CG1 CG2 REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 LYS A1002 CG CD CE NZ REMARK 470 ILE A1064 CG1 CG2 CD1 REMARK 470 ASP A1068 CG OD1 OD2 REMARK 470 ASP A 264 CG OD1 OD2 REMARK 470 LYS A 266 CG CD CE NZ REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 GLU A 306 CG CD OE1 OE2 REMARK 470 ARG A 312 CG CD NE CZ NH1 NH2 REMARK 470 SER A 314 OG REMARK 470 ARG A 315 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 79 38.16 -95.31 REMARK 500 LEU A 139 -47.59 -139.23 REMARK 500 ILE A 145 -6.12 -59.71 REMARK 500 ALA A 165 -75.67 -100.57 REMARK 500 THR A1010 -70.41 -94.48 REMARK 500 ASP A1062 -76.65 -94.35 REMARK 500 SER A 314 -53.58 -124.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9ER A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 1202 DBREF 5ZKP A 2 216 UNP P25105 PTAFR_HUMAN 2 216 DBREF 5ZKP A 1001 1147 UNP P00323 FLAV_DESVH 2 148 DBREF 5ZKP A 224 316 UNP P25105 PTAFR_HUMAN 224 316 SEQADV 5ZKP GLY A -1 UNP P25105 EXPRESSION TAG SEQADV 5ZKP ALA A 0 UNP P25105 EXPRESSION TAG SEQADV 5ZKP PRO A 1 UNP P25105 EXPRESSION TAG SEQADV 5ZKP TYR A 116 UNP P25105 PHE 116 ENGINEERED MUTATION SEQADV 5ZKP ASP A 169 UNP P25105 ASN 169 ENGINEERED MUTATION SEQADV 5ZKP ALA A 1001 UNP P00323 PRO 2 ENGINEERED MUTATION SEQADV 5ZKP TRP A 1097 UNP P00323 TYR 98 ENGINEERED MUTATION SEQADV 5ZKP ASP A 230 UNP P25105 ALA 230 ENGINEERED MUTATION SEQADV 5ZKP ALA A 234 UNP P25105 VAL 234 ENGINEERED MUTATION SEQADV 5ZKP ASN A 289 UNP P25105 ASP 289 ENGINEERED MUTATION SEQADV 5ZKP GLU A 317 UNP P25105 EXPRESSION TAG SEQADV 5ZKP PHE A 318 UNP P25105 EXPRESSION TAG SEQADV 5ZKP LEU A 319 UNP P25105 EXPRESSION TAG SEQADV 5ZKP GLU A 320 UNP P25105 EXPRESSION TAG SEQADV 5ZKP VAL A 321 UNP P25105 EXPRESSION TAG SEQADV 5ZKP LEU A 322 UNP P25105 EXPRESSION TAG SEQADV 5ZKP PHE A 323 UNP P25105 EXPRESSION TAG SEQADV 5ZKP GLN A 324 UNP P25105 EXPRESSION TAG SEQRES 1 A 466 GLY ALA PRO GLU PRO HIS ASP SER SER HIS MET ASP SER SEQRES 2 A 466 GLU PHE ARG TYR THR LEU PHE PRO ILE VAL TYR SER ILE SEQRES 3 A 466 ILE PHE VAL LEU GLY VAL ILE ALA ASN GLY TYR VAL LEU SEQRES 4 A 466 TRP VAL PHE ALA ARG LEU TYR PRO CYS LYS LYS PHE ASN SEQRES 5 A 466 GLU ILE LYS ILE PHE MET VAL ASN LEU THR MET ALA ASP SEQRES 6 A 466 MET LEU PHE LEU ILE THR LEU PRO LEU TRP ILE VAL TYR SEQRES 7 A 466 TYR GLN ASN GLN GLY ASN TRP ILE LEU PRO LYS PHE LEU SEQRES 8 A 466 CYS ASN VAL ALA GLY CYS LEU PHE PHE ILE ASN THR TYR SEQRES 9 A 466 CYS SER VAL ALA PHE LEU GLY VAL ILE THR TYR ASN ARG SEQRES 10 A 466 TYR GLN ALA VAL THR ARG PRO ILE LYS THR ALA GLN ALA SEQRES 11 A 466 ASN THR ARG LYS ARG GLY ILE SER LEU SER LEU VAL ILE SEQRES 12 A 466 TRP VAL ALA ILE VAL GLY ALA ALA SER TYR PHE LEU ILE SEQRES 13 A 466 LEU ASP SER THR ASN THR VAL PRO ASP SER ALA GLY SER SEQRES 14 A 466 GLY ASP VAL THR ARG CYS PHE GLU HIS TYR GLU LYS GLY SEQRES 15 A 466 SER VAL PRO VAL LEU ILE ILE HIS ILE PHE ILE VAL PHE SEQRES 16 A 466 SER PHE PHE LEU VAL PHE LEU ILE ILE LEU PHE CYS ASN SEQRES 17 A 466 LEU VAL ILE ILE ARG THR LEU LEU MET GLN ALA LYS ALA SEQRES 18 A 466 LEU ILE VAL TYR GLY SER THR THR GLY ASN THR GLU TYR SEQRES 19 A 466 THR ALA GLU THR ILE ALA ARG GLU LEU ALA ASP ALA GLY SEQRES 20 A 466 TYR GLU VAL ASP SER ARG ASP ALA ALA SER VAL GLU ALA SEQRES 21 A 466 GLY GLY LEU PHE GLU GLY PHE ASP LEU VAL LEU LEU GLY SEQRES 22 A 466 CYS SER THR TRP GLY ASP ASP SER ILE GLU LEU GLN ASP SEQRES 23 A 466 ASP PHE ILE PRO LEU PHE ASP SER LEU GLU GLU THR GLY SEQRES 24 A 466 ALA GLN GLY ARG LYS VAL ALA CYS PHE GLY CYS GLY ASP SEQRES 25 A 466 SER SER TRP GLU TYR PHE CYS GLY ALA VAL ASP ALA ILE SEQRES 26 A 466 GLU GLU LYS LEU LYS ASN LEU GLY ALA GLU ILE VAL GLN SEQRES 27 A 466 ASP GLY LEU ARG ILE ASP GLY ASP PRO ARG ALA ALA ARG SEQRES 28 A 466 ASP ASP ILE VAL GLY TRP ALA HIS ASP VAL ARG GLY ALA SEQRES 29 A 466 ILE ALA GLU VAL LYS ARG ARG ASP LEU TRP MET ALA CYS SEQRES 30 A 466 THR VAL LEU ALA VAL PHE ILE ILE CYS PHE VAL PRO HIS SEQRES 31 A 466 HIS VAL VAL GLN LEU PRO TRP THR LEU ALA GLU LEU GLY SEQRES 32 A 466 PHE GLN ASP SER LYS PHE HIS GLN ALA ILE ASN ASP ALA SEQRES 33 A 466 HIS GLN VAL THR LEU CYS LEU LEU SER THR ASN CYS VAL SEQRES 34 A 466 LEU ASN PRO VAL ILE TYR CYS PHE LEU THR LYS LYS PHE SEQRES 35 A 466 ARG LYS HIS LEU THR GLU LYS PHE TYR SER MET ARG SER SEQRES 36 A 466 SER ARG LYS GLU PHE LEU GLU VAL LEU PHE GLN HET 9ER A1201 33 HET FMN A1202 31 HETNAM 9ER N1,N1-DIMETHYL-N2-[(PYRIDIN-3-YL)METHYL]-N2-{4-[2,4,6- HETNAM 2 9ER TRI(PROPAN-2-YL)PHENYL]-1,3-THIAZOL-2-YL}ETHANE-1,2- HETNAM 3 9ER DIAMINE HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 2 9ER C28 H40 N4 S FORMUL 3 FMN C17 H21 N4 O9 P HELIX 1 AA1 PHE A 13 TYR A 44 1 32 HELIX 2 AA2 CYS A 46 LYS A 48 5 3 HELIX 3 AA3 PHE A 49 ILE A 68 1 20 HELIX 4 AA4 THR A 69 ASN A 79 1 11 HELIX 5 AA5 PRO A 86 THR A 120 1 35 HELIX 6 AA6 ILE A 141 LEU A 155 1 15 HELIX 7 AA7 PRO A 183 MET A 215 1 33 HELIX 8 AA8 GLY A 1012 ALA A 1028 1 17 HELIX 9 AA9 PHE A 1070 SER A 1076 1 7 HELIX 10 AB1 CYS A 1101 ASN A 1113 1 13 HELIX 11 AB2 PRO A 1129 ALA A 1131 5 3 HELIX 12 AB3 ALA A 1132 CYS A 244 1 37 HELIX 13 AB4 CYS A 244 GLY A 261 1 18 HELIX 14 AB5 ASP A 264 SER A 283 1 20 HELIX 15 AB6 THR A 284 SER A 313 1 30 SHEET 1 AA1 2 THR A 158 PRO A 162 0 SHEET 2 AA1 2 ASP A 169 CYS A 173 -1 O ARG A 172 N ASN A 159 SHEET 1 AA2 5 GLU A1031 ASP A1036 0 SHEET 2 AA2 5 LYS A1002 GLY A1008 1 N ILE A1005 O ARG A1035 SHEET 3 AA2 5 LEU A1051 CYS A1056 1 O LEU A1053 N LEU A1004 SHEET 4 AA2 5 LYS A1086 GLY A1093 1 O ALA A1088 N LEU A1054 SHEET 5 AA2 5 GLU A1117 ILE A1118 1 O GLU A1117 N VAL A1087 SHEET 1 AA3 5 GLU A1031 ASP A1036 0 SHEET 2 AA3 5 LYS A1002 GLY A1008 1 N ILE A1005 O ARG A1035 SHEET 3 AA3 5 LEU A1051 CYS A1056 1 O LEU A1053 N LEU A1004 SHEET 4 AA3 5 LYS A1086 GLY A1093 1 O ALA A1088 N LEU A1054 SHEET 5 AA3 5 LEU A1123 ASP A1126 1 O ILE A1125 N GLY A1091 SHEET 1 AA4 2 THR A1058 TRP A1059 0 SHEET 2 AA4 2 GLU A1065 LEU A1066 -1 O GLU A1065 N TRP A1059 SSBOND 1 CYS A 90 CYS A 173 1555 1555 2.03 SITE 1 AC1 12 TYR A 22 TRP A 73 TYR A 77 GLY A 94 SITE 2 AC1 12 PHE A 97 PHE A 98 TYR A 102 PHE A 174 SITE 3 AC1 12 ILE A 191 TRP A 255 HIS A 275 LEU A 279 SITE 1 AC2 19 GLU A 51 SER A1009 THR A1010 THR A1011 SITE 2 AC2 19 GLY A1012 ASN A1013 THR A1014 SER A1057 SITE 3 AC2 19 THR A1058 TRP A1059 GLY A1060 CYS A1092 SITE 4 AC2 19 GLY A1093 ASP A1094 TRP A1097 TYR A1099 SITE 5 AC2 19 PHE A1100 CYS A1101 GLY A1127 CRYST1 67.050 67.050 280.250 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014914 0.008611 0.000000 0.00000 SCALE2 0.000000 0.017221 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003568 0.00000