Table of Contents
Multiple sequence alignment
An example of Multiple Alignment
An important contribution of Molecular Biology studies was the following discovery:
Why do we need multiple alignments?
Why do we need multiple alignments?
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MULTIPLE ALIGNMENT
Why do we need multiple alignments?
Why do we need multiple alignments?
Why do we need multiple alignments?
Why do we need multiple alignments?
The Computational Challenge of MSA
The Computational Challenge of MSA
The Computational Challenge of MSA
Approximate Methods
Approximate Methods
Multiple Alignment
Steps to create multiple alignment
Steps in Multiple Alignment
Steps to create multiple alignment
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Tips in choosing your sequences General considerations
Tips in choosing your sequences General considerations
What you need to know about multiple alignment programs
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ClustalW- for multiple alignment
ClustalW- for multiple alignment
ClustalW alignment Method
ClustalW alignment Method
ClustalW alignment Method
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ClustalW alignment Method
Running ClustalW
Using ClustalW
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ClustalW options
ClustalW options
ClustalX - Multiple Sequence Alignment Program
ClustalX
ClustalX
ClustalX
ClustalX
ClustalX
ClustalX
Multiple alignment in GCG
Multiple alignment in GCG
PileUp for Multiple Alignment
Choosing sequences for PileUp
Output of Pileup
Output of Pileup
Output of Pileup
PileUp considirations
Pileup special options
Displaying a multiple alignment in GCG
Example of PrettyBox Output
Problems with Progressive alignments
Problems with Progressive alignments
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