1A50 Lyase date Feb 18, 1998
title Crystal Structure Of Wild-Type Tryptophan Synthase Complexed Fluoroindole Propanol Phosphate
authors T.R.Schneider, E.Gerhardt, M.Lee, P.H.Liang, K.S.Anderson, I.Sch
compound source
Molecule: Tryptophan Synthase (Alpha Chain)
Chain: A
Ec: 4.2.1.20
Other_details: Inhibitor 5-Fluoroindole Propanol Phosphate The Alpha Site;
Organism_scientific: Salmonella Typhimurium
Organism_taxid: 602
Cell_line: Cb149
Plasmid: Pstb7

Molecule: Tryptophan Synthase (Beta Chain)
Chain: B
Ec: 4.2.1.20
Other_details: Inhibitor 5-Fluoroindole Propanol Phosphate The Alpha Site

Organism_scientific: Salmonella Typhimurium
Organism_taxid: 602
Cell_line: Cb149
Plasmid: Pstb7
symmetry Space Group: C 1 2 1
R_factor 0.177 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
182.700 60.700 67.500 90.00 94.50 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand FIP, NA, PLP enzyme Lyase E.C.4.2.1.20 BRENDA
related structures by homologous chain: 1A5S, 1K7E
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceLoop closure and intersubunit communication in tryptophan synthase., Schneider TR, Gerhardt E, Lee M, Liang PH, Anderson KS, Schlichting I, Biochemistry 1998 Apr 21;37(16):5394-406. PMID:9548921
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (1a50.pdb1.gz) 203 Kb
  • LPC: Ligand-Protein Contacts for 1A50
  • CSU: Contacts of Structural Units for 1A50
  • Likely Quarternary Molecular Structure file(s) for 1A50
  • Retrieve 1A50 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A50 from S2C, [Save to disk]
  • View 1A50 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A50
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1A50, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a50a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1a50b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a50_A] [1a50_B] [1a50]
  • SWISS-PROT database: [P00929] [P0A2K1]
  • Domain organization of [TRPA_SALTY] [TRPB_SALTY] by SWISSPFAM
  • Other resources with information on 1A50
  • Community annotation for 1A50 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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