1AZF	Hydrolase	date	Nov 17, 1997
title	Chicken Egg White Lysozyme Crystal Grown In Bromide Solution
authors	K.Lim, A.Nadarajah, E.L.Forsythe, M.L.Pusey
compound		source
Molecule: Lysozyme Chain: A Ec: 3.2.1.17		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Cell: Egg Cellular_location: Cytoplasm (White)
symmetry	Space Group: P 43 21 2	R_factor 0.193 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 79.140 79.140 38.020 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	BR	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
related structures	by homologous chain: 1GE3, 1LJF
Gene Ontology	Chain Function Process Component A
Primary reference	Locations of bromide ions in tetragonal lysozyme crystals., Lim K, Nadarajah A, Forsythe EL, Pusey ML, Acta Crystallogr D Biol Crystallogr 1998 Sep 1;54 ( Pt 5):899-904. PMID:9757106

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (1azf.pdb1.gz) 22 Kb LPC: Ligand-Protein Contacts for 1AZF CSU: Contacts of Structural Units for 1AZF Likely Quarternary Molecular Structure file(s) for 1AZF Structure Factors (101 Kb) Retrieve 1AZF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1AZF from S2C, [Save to disk] Re-refined 1azf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1AZF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1AZF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1AZF, from MSDmotif at EBI Genome occurence of 1AZF's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1azf__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1azf_A] [1azf] SWISS-PROT database: [P00698] Domain organization of [LYSC_CHICK] by SWISSPFAM Domain found in 1AZF: [LYZ1 ] by SMART

Other resources with information on 1AZF

Community annotation for 1AZF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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