1BRL Luminescence date Mar 20, 1995
title Three-Dimensional Structure Of Bacterial Luciferase From Vib Harveyi At 2.4 Angstroms Resolution
authors A.J.Fisher, I.Rayment
compound source
Molecule: Bacterial Luciferase
Chain: A, C
Ec: 1.14.14.3
Other_details: Apo (No Fmn)
Organism_scientific: Vibrio Harveyi
Organism_taxid: 669

Molecule: Bacterial Luciferase
Chain: B, D
Ec: 1.14.14.3
Other_details: Apo (No Fmn)

Organism_scientific: Vibrio Harveyi
Organism_taxid: 669
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.900 112.700 301.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand PO4 enzyme Oxidoreductase E.C.1.14.14.3 BRENDA
note 1BRL (Molecule of the Month:pdb78)
related structures by homologous chain: 1BSL, 1LUC, 1XKJ
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThree-dimensional structure of bacterial luciferase from Vibrio harveyi at 2.4 A resolution., Fisher AJ, Raushel FM, Baldwin TO, Rayment I, Biochemistry 1995 May 23;34(20):6581-6. PMID:7756289
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (214 Kb) [Save to disk]
  • Biological Unit Coordinates (1brl.pdb1.gz) 106 Kb
  • Biological Unit Coordinates (1brl.pdb2.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 1BRL
  • CSU: Contacts of Structural Units for 1BRL
  • Likely Quarternary Molecular Structure file(s) for 1BRL
  • Retrieve 1BRL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BRL from S2C, [Save to disk]
  • View 1BRL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BRL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BRL, from MSDmotif at EBI
  • Genome occurence of 1BRL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1brla_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1brlb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1brl_B] [1brl_C] [1brl] [1brl_A] [1brl_D]
  • SWISS-PROT database: [P07740] [P07739]
  • Domain organization of [LUXA_VIBHA] [LUXB_VIBHA] by SWISSPFAM
  • Other resources with information on 1BRL
  • Community annotation for 1BRL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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