1CJ0	Transferase	date	Apr 20, 1999
title	Crystal Structure Of Rabbit Cytosolic Serine Hydroxymethyltr At 2.8 Angstrom Resolution
authors	J.N.Scarsdale, G.Kazanina, S.Radaev, V.Schirch, H.T.Wright
compound		source
Molecule: Protein (Serine Hydroxymethyltransferase) Chain: A, B Synonym: Shmt Engineered: Yes Mutation: Yes Other_details: Each Protein Molecule Has Covalently Linked Cofactor		Organism_scientific: Oryctolagus Cuniculus Organism_common: Rabbit Organism_taxid: 9986 Strain: New Zealand White Organ: Liver Cellular_location: Cytoplasm Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Hms174(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet 22b(+)
symmetry	Space Group: P 41 21 2	R_factor 0.214 R_Free 0.280
crystal cell	length a length b length c angle alpha angle beta angle gamma 116.380 116.380 165.380 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	PLP	enzyme
related structures	by homologous chain: 1LS3, 1RVY
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of rabbit cytosolic serine hydroxymethyltransferase at 2.8 A resolution: mechanistic implications., Scarsdale JN, Kazanina G, Radaev S, Schirch V, Wright HT, Biochemistry 1999 Jun 29;38(26):8347-58. PMID:10387080

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk] Biological Unit Coordinates (1cj0.pdb1.gz) 128 Kb LPC: Ligand-Protein Contacts for 1CJ0 CSU: Contacts of Structural Units for 1CJ0 Likely Quarternary Molecular Structure file(s) for 1CJ0 Structure Factors (260 Kb) Retrieve 1CJ0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1CJ0 from S2C, [Save to disk] Re-refined 1cj0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1CJ0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1CJ0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1CJ0, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1cj0a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1cj0b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1cj0_B] [1cj0] [1cj0_A] SWISS-PROT database: [P07511] Domain organization of [GLYC_RABIT] by SWISSPFAM

Other resources with information on 1CJ0

Community annotation for 1CJ0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---