1CMT Oxidoreductase (H2o2(A)) date Apr 11, 1995
title The Role Of Aspartate-235 In The Binding Of Cations To An Ar Cavity At The Radical Site Of Cytochrome C Peroxidase
authors M.M.Fitzgerald, M.L.Trester, G.M.Jensen, D.E.Mcree, D.B.Goodin
compound source
Molecule: Cytochrome C Peroxidase
Chain: A
Ec: 1.11.1.5
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
symmetry Space Group: P 21 21 21
R_factor 0.168 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
108.000 77.300 51.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand HEM enzyme Oxidoreductase E.C.1.11.1.5 BRENDA
related structures by homologous chain: 1A2F, 1AEU
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe role of aspartate-235 in the binding of cations to an artificial cavity at the radical site of cytochrome c peroxidase., Fitzgerald MM, Trester ML, Jensen GM, McRee DE, Goodin DB, Protein Sci 1995 Sep;4(9):1844-50. PMID:8528082
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (1cmt.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 1CMT
  • CSU: Contacts of Structural Units for 1CMT
  • Likely Quarternary Molecular Structure file(s) for 1CMT
  • Retrieve 1CMT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CMT from S2C, [Save to disk]
  • View 1CMT in 3D
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  • Visual 3D analysis of 1CMT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CMT, from MSDmotif at EBI
  • Genome occurence of 1CMT's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cmt__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cmt_A] [1cmt]
  • SWISS-PROT database: [P00431]
  • Domain organization of [CCPR_YEAST] by SWISSPFAM
  • Other resources with information on 1CMT
  • Community annotation for 1CMT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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