1DAW Transferase date Nov 01, 1999
title Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 Subunit) And Mg-Amppnp
authors K.Niefind, M.Puetter, B.Guerra, O.G.Issinger, D.Schomburg
compound source
Molecule: Protein Kinase Ck2
Chain: A
Fragment: Catalytic Subunit
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Zea Mays
Organism_taxid: 4577
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.212 R_Free 0.285
crystal
cell
length a length b length c angle alpha angle beta angle gamma
143.110 59.200 45.810 90.00 103.56 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand ANP, MG enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1DAY, 1J91
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceGTP plus water mimic ATP in the active site of protein kinase CK2., Niefind K, Putter M, Guerra B, Issinger OG, Schomburg D, Nat Struct Biol 1999 Dec;6(12):1100-3. PMID:10581548
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (1daw.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 1DAW
  • CSU: Contacts of Structural Units for 1DAW
  • Likely Quarternary Molecular Structure file(s) for 1DAW
  • Structure Factors (333 Kb)
  • Retrieve 1DAW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DAW from S2C, [Save to disk]
  • Re-refined 1daw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1DAW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1DAW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DAW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dawa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1daw_A] [1daw]
  • SWISS-PROT database: [P28523]
  • Domain organization of [CSK2A_MAIZE] by SWISSPFAM
  • Domain found in 1DAW: [S_TKc ] by SMART
  • Other resources with information on 1DAW
  • Community annotation for 1DAW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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