1EJY Hydrolase Peptide date Mar 05, 2000
title Mouse Importin Alpha-Nucleoplasmin Nls Peptide Complex
authors M.R.Fontes, T.Teh, B.Kobe
compound source
Molecule: Nucleoplasmin Nls Peptide
Chain: N
Fragment: Nls (Nuclear Localization Signal) Bipartite Pepti Residues 155-170;
Engineered: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. The Of This Peptide Is Naturally Found In Xenopus Laevis (Afric Frog).;

Molecule: Importin Alpha
Chain: I
Fragment: Nls Binding Domain, Residues 70-529
Synonym: Karyopherin
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet30a
symmetry Space Group: P 21 21 21
R_factor 0.223 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.901 89.828 99.903 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
related structures by homologous chain: 1EJL
Gene
Ontology
ChainFunctionProcessComponent
I


Primary referenceStructural basis of recognition of monopartite and bipartite nuclear localization sequences by mammalian importin-alpha., Fontes MR, Teh T, Kobe B, J Mol Biol 2000 Apr 14;297(5):1183-94. PMID:10764582
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (1ejy.pdb1.gz) 66 Kb
  • CSU: Contacts of Structural Units for 1EJY
  • Likely Quarternary Molecular Structure file(s) for 1EJY
  • Retrieve 1EJY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EJY from S2C, [Save to disk]
  • View 1EJY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EJY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EJY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ejyi_, region I [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ejy_I] [1ejy_N] [1ejy]
  • SWISS-PROT database: [P52293] [P05221]
  • Domain organization of [IMA2_MOUSE] [NUPL_XENLA] by SWISSPFAM
  • Domain found in 1EJY: [ARM ] by SMART
  • Other resources with information on 1EJY
  • Community annotation for 1EJY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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