1F2F	Transferase	date	May 24, 2000
title	Src Sh2 Thref1trp Mutant
authors	M.S.Kimber, J.Nachman, A.M.Cunningham, G.D.Gish, T.Pawson, E.F.Pa
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Src Chain: A Fragment: Sh2 Domain Ec: 2.7.1.112 Engineered: Yes Mutation: Yes		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-11d
symmetry	Space Group: C 1 2 1	R_factor 0.208 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 74.460 27.220 55.250 90.00 106.68 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	PO4	enzyme	Transferase E.C.2.7.1.112 BRENDA
related structures	by homologous chain: 1O41, 1O4O
Primary reference	Structural basis for specificity switching of the Src SH2 domain., Kimber MS, Nachman J, Cunningham AM, Gish GD, Pawson T, Pai EF, Mol Cell 2000 Jun;5(6):1043-9. PMID:10911998

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk] Biological Unit Coordinates (1f2f.pdb1.gz) 19 Kb LPC: Ligand-Protein Contacts for 1F2F CSU: Contacts of Structural Units for 1F2F Likely Quarternary Molecular Structure file(s) for 1F2F Structure Factors (90 Kb) Retrieve 1F2F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1F2F from S2C, [Save to disk] Re-refined 1f2f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1F2F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1F2F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1F2F, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f2fa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1f2f_A] [1f2f] SWISS-PROT database: [P00523] Domain organization of [SRC_CHICK] by SWISSPFAM Domain found in 1F2F: [SH2 ] by SMART

Other resources with information on 1F2F

Community annotation for 1F2F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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