1F8S	Oxidoreductase	date	Jul 04, 2000
title	Crystal Structure Of L-Amino Acid Oxidase From Calloselasma Rhodostoma, Complexed With Three Molecules Of O-Aminobenzoa
authors	P.D.Pawelek, J.Cheah, R.Coulombe, P.Macheroux, S.Ghisla, A.Vrieli
compound		source
Molecule: L-Amino Acid Oxidase Chain: A, B, C, D, E, F, G, H Ec: 1.4.3.2		Organism_scientific: Calloselasma Rhodostoma Organism_common: Malayan Pit Viper Organism_taxid: 8717 Secretion: Venom
symmetry	Space Group: P 1 21 1	R_factor 0.205 R_Free 0.225
crystal cell	length a length b length c angle alpha angle beta angle gamma 77.553 137.180 212.634 90.00 105.63 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	BE2, FAD, NAG	enzyme	Oxidoreductase E.C.1.4.3.2 BRENDA
related structures	by homologous chain: 1F8R, 1REO
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G toxin activity
Primary reference	The structure of L-amino acid oxidase reveals the substrate trajectory into an enantiomerically conserved active site., Pawelek PD, Cheah J, Coulombe R, Macheroux P, Ghisla S, Vrielink A, EMBO J 2000 Aug 15;19(16):4204-15. PMID:10944103

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (673 Kb) [Save to disk] Biological Unit Coordinates (1f8s.pdb1.gz) 171 Kb Biological Unit Coordinates (1f8s.pdb2.gz) 174 Kb Biological Unit Coordinates (1f8s.pdb3.gz) 172 Kb Biological Unit Coordinates (1f8s.pdb4.gz) 170 Kb LPC: Ligand-Protein Contacts for 1F8S CSU: Contacts of Structural Units for 1F8S Likely Quarternary Molecular Structure file(s) for 1F8S Structure Factors (2652 Kb) Retrieve 1F8S in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1F8S from S2C, [Save to disk] Re-refined 1f8s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1F8S in 3D

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Visual 3D analysis of 1F8S

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1F8S, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f8sa2, region A:320-432 [Jmol] [rasmolscript] [script source]     - Domain d1f8sa1, region A:5-319,A:433-486 [Jmol] [rasmolscript] [script source]     - Domain d1f8sb2, region B:320-432 [Jmol] [rasmolscript] [script source]     - Domain d1f8sb1, region B:5-319,B:433-486 [Jmol] [rasmolscript] [script source]     - Domain d1f8sc2, region C:320-432 [Jmol] [rasmolscript] [script source]     - Domain d1f8sc1, region C:5-319,C:433-486 [Jmol] [rasmolscript] [script source]     - Domain d1f8sd2, region D:320-432 [Jmol] [rasmolscript] [script source]     - Domain d1f8sd1, region D:5-319,D:433-486 [Jmol] [rasmolscript] [script source]     - Domain d1f8se2, region E:320-432 [Jmol] [rasmolscript] [script source]     - Domain d1f8se1, region E:5-319,E:433-486 [Jmol] [rasmolscript] [script source]     - Domain d1f8sf2, region F:320-432 [Jmol] [rasmolscript] [script source]     - Domain d1f8sf1, region F:5-319,F:433-486 [Jmol] [rasmolscript] [script source]     - Domain d1f8sg2, region G:320-432 [Jmol] [rasmolscript] [script source]     - Domain d1f8sg1, region G:5-319,G:433-486 [Jmol] [rasmolscript] [script source]     - Domain d1f8sh2, region H:320-432 [Jmol] [rasmolscript] [script source]     - Domain d1f8sh1, region H:5-319,H:433-486 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1f8s_C] [1f8s_B] [1f8s_D] [1f8s_A] [1f8s] [1f8s_G] [1f8s_H] [1f8s_F] [1f8s_E] SWISS-PROT database: [P81382] Domain organization of [OXLA_AGKRH] by SWISSPFAM

Other resources with information on 1F8S

Community annotation for 1F8S at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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