1FGX Transferase date Jul 29, 2000
title Crystal Structure Of The Bovine Beta 1,4 Galactosyltransfera (B4galt1) Catalytic Domain Complexed With Ump
authors L.N.Gastinel, C.Cambillau, Y.Bourne
compound source
Molecule: Beta 1,4 Galactosyltransferase
Chain: A, B
Fragment: Catalytic Domain
Synonym: Beta4galt1
Ec: 2.4.1.38
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Liver
Expression_system: Mus Musculus
Expression_system_common: House Mouse
Expression_system_taxid: 10090
Expression_system_cell_line: Nso
Expression_system_plasmid: Pee12
symmetry Space Group: C 2 2 21
R_factor 0.225 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
108.500 161.000 107.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand U5P enzyme Transferase E.C.2.4.1.38 BRENDA
related structures by homologous chain: 1FR8, 1NWG
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structures of the bovine beta4galactosyltransferase catalytic domain and its complex with uridine diphosphogalactose., Gastinel LN, Cambillau C, Bourne Y, EMBO J 1999 Jul 1;18(13):3546-57. PMID:10393171
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (1fgx.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (1fgx.pdb2.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 1FGX
  • CSU: Contacts of Structural Units for 1FGX
  • Likely Quarternary Molecular Structure file(s) for 1FGX
  • Structure Factors (389 Kb)
  • Retrieve 1FGX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FGX from S2C, [Save to disk]
  • Re-refined 1fgx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1FGX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FGX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FGX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fgxa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fgxb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fgx_A] [1fgx_B] [1fgx]
  • SWISS-PROT database: [P08037]
  • Domain organization of [B4GT1_BOVIN] by SWISSPFAM
  • Other resources with information on 1FGX
  • Community annotation for 1FGX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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