1FI1 FhuA in complex with lipopolysaccharide and rifamycin CGP4832 date
authors Ferguson, A.D., Koedding, J., Boes, C., Walker, G., Coulton, J.W., Diederichs, K., Braun, V., Welte, W.
compound source
symmetry
R_factor
R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90
ligand DDQ, DPO, FTT, GCN, GLA, GLC, GMH, KDO, MG, NA, NI, PA1, PO4, RIF enzyme
related structures by homologous chain: 1BY3, 1QJQ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceActive transport of an antibiotic rifamycin derivative by the outer-membrane protein FhuA., Ferguson AD, Kodding J, Walker G, Bos C, Coulton JW, Diederichs K, Braun V, Welte W, Structure (Camb) 2001 Aug;9(8):707-16. PMID:11587645
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk]
  • Biological Unit Coordinates (1fi1.pdb1.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 1FI1
  • CSU: Contacts of Structural Units for 1FI1
  • Likely Quarternary Molecular Structure file(s) for 1FI1
  • Structure Factors (287 Kb)
  • Retrieve 1FI1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FI1 from S2C, [Save to disk]
  • Re-refined 1fi1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1FI1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FI1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FI1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fi1a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fi1_A] [1fi1]
  • SWISS-PROT database: [P06971]
  • Belongs to the outer membrane receptor (omr) family according to TCDB.
  • Domain organization of [FHUA_ECOLI] by SWISSPFAM
    • Other resources with information on 1FI1
  • Community annotation for 1FI1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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