1FLU Hydrolase date Aug 15, 2000
title Hen Egg White Lysozyme Mutant With Alanine Substituted For G
authors K.Masumoto, T.Ueda, H.Motoshima, T.Imoto
compound source
Molecule: Lysozyme
Chain: A
Synonym: 1,4-Beta-N-Acetylmuramidase C, Allergen Gal D 4, G
Ec: 3.2.1.17
Engineered: Yes
Mutation: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pam82
symmetry Space Group: P 43 21 2
R_factor 0.174 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.310 79.310 38.010 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.79 Å
ligand
enzyme Hydrolase E.C.3.2.1.17 BRENDA
related structures by homologous chain: 1FN5, 1IOQ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRelationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine., Masumoto K, Ueda T, Motoshima H, Imoto T, Protein Eng 2000 Oct;13(10):691-5. PMID:11112507
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (1flu.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 1FLU
  • Likely Quarternary Molecular Structure file(s) for 1FLU
  • Retrieve 1FLU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FLU from S2C, [Save to disk]
  • View 1FLU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FLU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FLU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1flua_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1flu] [1flu_A]
  • SWISS-PROT database: [P00698]
  • Domain organization of [LYSC_CHICK] by SWISSPFAM
  • Domain found in 1FLU: [LYZ1 ] by SMART
  • Other resources with information on 1FLU
  • Community annotation for 1FLU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1FLU from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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