1GAR Transferase (Formyl) date Dec 08, 1994
title Towards Structure-Based Drug Design: Crystal Structure Of A Multisubstrate Adduct Complex Of Glycinamide Ribonucleotide Transformylase At 1.96 Angstroms Resolution
authors I.A.Wilson, C.Klein, P.Chen, J.H.Arevalo
compound source
Molecule: Glycinamide Ribonucleotide Transformylase
Chain: A, B
Ec: 2.1.2.2
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.168 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.700 73.300 35.500 90.00 94.30 90.00
method X-Ray Diffractionresolution 1.96 Å
ligand U89 enzyme Transferase E.C.2.1.2.2 BRENDA
related structures by homologous chain: 1C2T, 3GAR
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceTowards structure-based drug design: crystal structure of a multisubstrate adduct complex of glycinamide ribonucleotide transformylase at 1.96 A resolution., Klein C, Chen P, Arevalo JH, Stura EA, Marolewski A, Warren MS, Benkovic SJ, Wilson IA, J Mol Biol 1995 May 26;249(1):153-75. PMID:7776369
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (1gar.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 1GAR
  • CSU: Contacts of Structural Units for 1GAR
  • Likely Quarternary Molecular Structure file(s) for 1GAR
  • Retrieve 1GAR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GAR from S2C, [Save to disk]
    • View 1GAR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GAR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GAR, from MSDmotif at EBI
  • Genome occurence of 1GAR's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gara_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1garb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gar] [1gar_A] [1gar_B]
  • SWISS-PROT database: [P08179]
  • Domain organization of [PUR3_ECOLI] by SWISSPFAM
    • Other resources with information on 1GAR
  • Community annotation for 1GAR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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