1GGV Hydrolase date Sep 27, 2000
title Crystal Structure Of The C123s Mutant Of Dienelactone Hydrol Bound With The Pms Moiety Of The Protease Inhibitor, Phenylmethylsulfonyl Fluoride (Pmsf)
authors A.Robinson, K.J.Edwards, P.D.Carr, J.D.Barton, G.D.Ewart, D.L.Oll
compound source
Molecule: Dienelactone Hydrolase
Chain: A
Ec: 3.1.1.45
Engineered: Yes
Mutation: Yes
Organism_scientific: Pseudomonas Putida
Organism_taxid: 303
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Lambda Temperature Sensitive Vect (Rsc, Anu);
Expression_system_plasmid: Pac27
symmetry Space Group: P 21 21 21
R_factor 0.151 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.080 51.860 82.610 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand SEB enzyme Hydrolase E.C.3.1.1.45 BRENDA
related structures by homologous chain: 1DIN
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the C123S mutant of dienelactone hydrolase (DLH) bound with the PMS moiety of the protease inhibitor phenylmethylsulfonyl fluoride (PMSF)., Robinson A, Edwards KJ, Carr PD, Barton JD, Ewart GD, Ollis DL, Acta Crystallogr D Biol Crystallogr 2000 Nov;56 ( Pt 11):1376-84. PMID:11053834
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1ggv.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1GGV
  • CSU: Contacts of Structural Units for 1GGV
  • Likely Quarternary Molecular Structure file(s) for 1GGV
  • Retrieve 1GGV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GGV from S2C, [Save to disk]
  • View 1GGV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Visual 3D analysis of 1GGV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GGV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ggva_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ggv] [1ggv_A]
  • SWISS-PROT database: [P0A114]
  • Domain organization of [CLCD_PSEPU] by SWISSPFAM
  • Other resources with information on 1GGV
  • Community annotation for 1GGV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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