1GTI MODIFIED GLUTATHIONE S-TRANSFERASE (PI) COMPLEXED WITH S (P-NITROBENZYL)GLUTATHIONE date
authors Vega, M.C., Coll, M.
compound source
symmetry
R_factor
R_Free 0.2770000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
ligand CCS, GTB enzyme
related structures by homologous chain: 1GSS
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B
  • glutathione peroxidase activ...


    • Primary referenceThe three-dimensional structure of Cys-47-modified mouse liver glutathione S-transferase P1-1. Carboxymethylation dramatically decreases the affinity for glutathione and is associated with a loss of electron density in the alphaB-310B region., Vega MC, Walsh SB, Mantle TJ, Coll M, J Biol Chem 1998 Jan 30;273(5):2844-50. PMID:9446594
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk]
  • Biological Unit Coordinates (1gti.pdb1.gz) 68 Kb
  • Biological Unit Coordinates (1gti.pdb2.gz) 67 Kb
  • Biological Unit Coordinates (1gti.pdb3.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 1GTI
  • CSU: Contacts of Structural Units for 1GTI
  • Likely Quarternary Molecular Structure file(s) for 1GTI
  • Retrieve 1GTI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GTI from S2C, [Save to disk]
    • View 1GTI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GTI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GTI, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gtia2, region A:1-78 [Jmol] [rasmolscript] [script source]
        - Domain d1gtia1, region A:79-209 [Jmol] [rasmolscript] [script source]
        - Domain d1gtib2, region B:1-78 [Jmol] [rasmolscript] [script source]
        - Domain d1gtib1, region B:79-209 [Jmol] [rasmolscript] [script source]
        - Domain d1gtic2, region C:1-78 [Jmol] [rasmolscript] [script source]
        - Domain d1gtic1, region C:79-209 [Jmol] [rasmolscript] [script source]
        - Domain d1gtid2, region D:1-78 [Jmol] [rasmolscript] [script source]
        - Domain d1gtid1, region D:79-209 [Jmol] [rasmolscript] [script source]
        - Domain d1gtie2, region E:1-78 [Jmol] [rasmolscript] [script source]
        - Domain d1gtie1, region E:79-209 [Jmol] [rasmolscript] [script source]
        - Domain d1gtif2, region F:1-78 [Jmol] [rasmolscript] [script source]
        - Domain d1gtif1, region F:79-209 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gti_F] [1gti] [1gti_B] [1gti_E] [1gti_C] [1gti_D] [1gti_A]
  • SWISS-PROT database: [P19157]
  • Domain organization of [GSTP1_MOUSE] by SWISSPFAM
    • Other resources with information on 1GTI
  • Community annotation for 1GTI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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