1H09	Hydrolase	date	Jun 12, 2002
title	Multimodular Pneumococcal Cell Wall Endolysin From Phage Cp-1
authors	J.A.Hermoso, B.Monterroso, A.Albert, P.Garcia, M.Menendez, M.Martinez-Ripoll, J.L.Garcia
compound		source
Molecule: Lysozyme Chain: A Synonym: Murein Hydrolase, Endolysin, Muramidase, Cp-1 Lysin; Ec: 3.2.1.17 Engineered: Yes		Organism_scientific: Bacteriophage Cp-1 Organism_taxid: 10747 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh1 Expression_system_plasmid: Pcip100
symmetry	Space Group: C 2 2 21	R_factor 0.206 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 77.950 95.780 129.280 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.1 Å
ligand		enzyme	Hydrolase E.C.3.2.1.17 BRENDA
related structures	by homologous chain: 1OBA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis for selective recognition of pneumococcal cell wall by modular endolysin from phage Cp-1., Hermoso JA, Monterroso B, Albert A, Galan B, Ahrazem O, Garcia P, Martinez-Ripoll M, Garcia JL, Menendez M, Structure (Camb) 2003 Oct;11(10):1239-49. PMID:14527392

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (1h09.pdb1.gz) 63 Kb CSU: Contacts of Structural Units for 1H09 Likely Quarternary Molecular Structure file(s) for 1H09 Structure Factors (210 Kb) Retrieve 1H09 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1H09 from S2C, [Save to disk] Re-refined 1h09 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1H09 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1H09

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1H09, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1h09a1, region A:191-339 [Jmol] [rasmolscript] [script source]     - Domain d1h09a2, region A:2-190 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1h09_A] [1h09] SWISS-PROT database: [P15057] Domain organization of [LYS_BPCP1] by SWISSPFAM Domain found in 1H09: [Glyco_25 ] by SMART

Other resources with information on 1H09

Community annotation for 1H09 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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